RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SEPT12Q8IYM1 358 aa8.55□□□□□ -1.04
HMGB1P10-201ENST00000395823 CXXC1Q9P0U4 656 aaPredicted RBP8.55□□□□□ -1.04
HMGB1P10-201ENST00000395823 AMOTL2Q9Y2J4 779 aa8.55□□□□□ -1.04
HMGB1P10-201ENST00000395823 SCTRP47872 440 aa8.54□□□□□ -1.04
HMGB1P10-201ENST00000395823 SKOR1P84550 965 aa8.54□□□□□ -1.04
HMGB1P10-201ENST00000395823 PSME1Q06323 249 aa8.53□□□□□ -1.04
HMGB1P10-201ENST00000395823 TRIM32Q13049 653 aa8.53□□□□□ -1.04
HMGB1P10-201ENST00000395823 RNF223E7ERA6 249 aa8.52□□□□□ -1.05
HMGB1P10-201ENST00000395823 USP4Q13107 963 aa8.52□□□□□ -1.05
HMGB1P10-201ENST00000395823 INTS6LQ5JSJ4 861 aaKnown RBP8.52□□□□□ -1.05
HMGB1P10-201ENST00000395823 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P10-201ENST00000395823 CDV3Q9UKY7 258 aaKnown RBP8.52□□□□□ -1.05
HMGB1P10-201ENST00000395823 RAB15P59190 212 aa8.51□□□□□ -1.05
HMGB1P10-201ENST00000395823 TSEN2Q8NCE0 465 aaKnown RBP8.51□□□□□ -1.05
HMGB1P10-201ENST00000395823 PURBQ96QR8 312 aaKnown RBP8.51□□□□□ -1.05
HMGB1P10-201ENST00000395823 UNCXA6NJT0 531 aa8.5□□□□□ -1.05
HMGB1P10-201ENST00000395823 ERVH48-1M5A8F1 160 aa8.5□□□□□ -1.05
HMGB1P10-201ENST00000395823 WEE1P30291 646 aa8.5□□□□□ -1.05
HMGB1P10-201ENST00000395823 SIRT1Q96EB6 747 aa8.5□□□□□ -1.05
HMGB1P10-201ENST00000395823 MAP4K5Q9Y4K4 846 aa8.5□□□□□ -1.05
HMGB1P10-201ENST00000395823 ZNF211Q13398 564 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P10-201ENST00000395823 CAPN12Q6ZSI9 719 aa8.49□□□□□ -1.05
HMGB1P10-201ENST00000395823 CCDC125Q86Z20 511 aa8.49□□□□□ -1.05
HMGB1P10-201ENST00000395823 M0R2N6 131 aa8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 STAU1O95793 577 aaKnown RBP8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 ITGBL1O95965 494 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 WNT7BP56706 349 aa8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 FKBP5Q13451 457 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 CDAN1Q8IWY9 1227 aa8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 ANKLE1Q8NAG6 615 aa8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 GAS2L2Q8NHY3 880 aa8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 ZNF358Q9NW07 568 aa8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 SEPT3Q9UH03 358 aa8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 EGFL7Q9UHF1 273 aa8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 RBM19Q9Y4C8 960 aaKnown RBP8.48□□□□□ -1.05
HMGB1P10-201ENST00000395823 RBM47A0AV96 593 aaKnown RBP8.47□□□□□ -1.05
HMGB1P10-201ENST00000395823 TMEM229AB2RXF0 380 aa8.47□□□□□ -1.05
HMGB1P10-201ENST00000395823 VARSP26640 1264 aaKnown RBP8.47□□□□□ -1.05
HMGB1P10-201ENST00000395823 SCNN1DP51172 638 aa8.47□□□□□ -1.05
HMGB1P10-201ENST00000395823 ERVK-9P63128 1117 aa8.47□□□□□ -1.05
HMGB1P10-201ENST00000395823 ECM1Q16610 540 aa8.47□□□□□ -1.05
HMGB1P10-201ENST00000395823 VASH1Q7L8A9 365 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P10-201ENST00000395823 HINFPQ9BQA5 517 aa8.47□□□□□ -1.05
HMGB1P10-201ENST00000395823 ANO2Q9NQ90 1003 aa8.47□□□□□ -1.05
HMGB1P10-201ENST00000395823 E9PSI1 815 aa8.46□□□□□ -1.06
HMGB1P10-201ENST00000395823 MYCP01106 439 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P10-201ENST00000395823 MARSP56192 900 aaKnown RBP8.46□□□□□ -1.06
HMGB1P10-201ENST00000395823 KCNC4Q03721 635 aa8.46□□□□□ -1.06
HMGB1P10-201ENST00000395823 OSBPL3Q9H4L5 887 aa8.46□□□□□ -1.06
HMGB1P10-201ENST00000395823 H3BRB1 525 aa8.45□□□□□ -1.06
HMGB1P10-201ENST00000395823 ZBTB24O43167 697 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P10-201ENST00000395823 ICMTO60725 284 aa8.45□□□□□ -1.06
HMGB1P10-201ENST00000395823 ABL1P00519 1130 aa8.45□□□□□ -1.06
HMGB1P10-201ENST00000395823 GRM5P41594 1212 aa8.45□□□□□ -1.06
HMGB1P10-201ENST00000395823 CDK15Q96Q40 435 aa8.45□□□□□ -1.06
HMGB1P10-201ENST00000395823 MKNK1Q9BUB5 465 aa8.45□□□□□ -1.06
HMGB1P10-201ENST00000395823 TUT1Q9H6E5 874 aaKnown RBP8.45□□□□□ -1.06
HMGB1P10-201ENST00000395823 BIN2Q9UBW5 565 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P10-201ENST00000395823 DNMT3AQ9Y6K1 912 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P10-201ENST00000395823 GTF3C2Q8WUA4 911 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P10-201ENST00000395823 EMID1Q96A84 441 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P10-201ENST00000395823 TMPRSS4Q9NRS4 437 aa8.44□□□□□ -1.06
HMGB1P10-201ENST00000395823 FSHRP23945 695 aa8.43□□□□□ -1.06
HMGB1P10-201ENST00000395823 EPHA4P54764 986 aa8.43□□□□□ -1.06
HMGB1P10-201ENST00000395823 MTMR3Q13615 1198 aa8.43□□□□□ -1.06
HMGB1P10-201ENST00000395823 CC2D2BQ6DHV5 1058 aa8.43□□□□□ -1.06
HMGB1P10-201ENST00000395823 CYLDQ9NQC7 956 aa8.43□□□□□ -1.06
HMGB1P10-201ENST00000395823 TLL2Q9Y6L7 1015 aa8.43□□□□□ -1.06
HMGB1P10-201ENST00000395823 WASLO00401 505 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 C21orf2O43822 256 aa8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 LILRA1O75019 489 aa8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 ERCC3P19447 782 aa8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 RPIAP49247 311 aa8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 ARID5BQ14865 1188 aa8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 RC3H1Q5TC82 1133 aaKnown RBP8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 POTEGQ6S5H5 508 aa8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 NPAS4Q8IUM7 802 aa8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 TNS4Q8IZW8 715 aa8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 ZNF784Q8NCA9 323 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 EHBP1Q8NDI1 1231 aa8.42□□□□□ -1.06
HMGB1P10-201ENST00000395823 SIAH2O43255 324 aa8.41□□□□□ -1.06
HMGB1P10-201ENST00000395823 IGFBP4P22692 258 aa8.41□□□□□ -1.06
HMGB1P10-201ENST00000395823 GDF10P55107 478 aa8.41□□□□□ -1.06
HMGB1P10-201ENST00000395823 ARHGAP4P98171 946 aa8.41□□□□□ -1.06
HMGB1P10-201ENST00000395823 PPP1R18Q6NYC8 613 aa8.41□□□□□ -1.06
HMGB1P10-201ENST00000395823 ETNK1Q9HBU6 452 aa8.41□□□□□ -1.06
HMGB1P10-201ENST00000395823 KIAA1522Q9P206 1035 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P10-201ENST00000395823 ANKRD33BA6NCL7 494 aa8.4□□□□□ -1.06
HMGB1P10-201ENST00000395823 ZNF16P17020 682 aaPredicted RBP8.4□□□□□ -1.06
HMGB1P10-201ENST00000395823 LIAT1Q6ZQX7 453 aa8.4□□□□□ -1.06
HMGB1P10-201ENST00000395823 GLYCTKQ8IVS8 523 aa8.4□□□□□ -1.06
HMGB1P10-201ENST00000395823 GGCXP38435 758 aa8.39□□□□□ -1.07
HMGB1P10-201ENST00000395823 MPNDQ8N594 471 aa8.39□□□□□ -1.07
HMGB1P10-201ENST00000395823 COL26A1Q96A83 441 aa8.39□□□□□ -1.07
HMGB1P10-201ENST00000395823 TSPAN10Q9H1Z9 355 aaPredicted RBP8.39□□□□□ -1.07
HMGB1P10-201ENST00000395823 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.39□□□□□ -1.07
HMGB1P10-201ENST00000395823 HCSTQ9UBK5 93 aa8.39□□□□□ -1.07
HMGB1P10-201ENST00000395823 INHAP05111 366 aa8.38□□□□□ -1.07
HMGB1P10-201ENST00000395823 NR3C2P08235 984 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms