RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 SLC15A2Q16348 729 aa25.06■■□□□ 1.6
CXCL12-204ENST00000395793 EMILIN1Q9Y6C2 1016 aa25.06■■□□□ 1.6
CXCL12-204ENST00000395793 NSD2O96028 1365 aa25.05■■□□□ 1.6
CXCL12-204ENST00000395793 KIF24Q5T7B8 1368 aa25.05■■□□□ 1.6
CXCL12-204ENST00000395793 ZCRB1Q8TBF4 217 aaKnown RBP25.05■■□□□ 1.6
CXCL12-204ENST00000395793 CCER1Q8TC90 406 aaPredicted RBP25.05■■□□□ 1.6
CXCL12-204ENST00000395793 STK32BQ9NY57 414 aa25.05■■□□□ 1.6
CXCL12-204ENST00000395793 LY75O60449 1722 aa25.04■■□□□ 1.6
CXCL12-204ENST00000395793 HSPA5P11021 654 aaKnown RBP25.04■■□□□ 1.6
CXCL12-204ENST00000395793 LRRC4BQ9NT99 713 aa25.04■■□□□ 1.6
CXCL12-204ENST00000395793 ZBTB7AO95365 584 aa25.02■■□□□ 1.6
CXCL12-204ENST00000395793 POLR3GLQ9BT43 218 aa25.02■■□□□ 1.6
CXCL12-204ENST00000395793 TUBGCP6Q96RT7 1819 aa25.01■■□□□ 1.59
CXCL12-204ENST00000395793 PKD1L3Q7Z443 1732 aa25■■□□□ 1.59
CXCL12-204ENST00000395793 PRIM1P49642 420 aaKnown RBP25■■□□□ 1.59
CXCL12-204ENST00000395793 EIF4G2P78344 907 aaKnown RBP eCLIP25■■□□□ 1.59
CXCL12-204ENST00000395793 ZNF827Q17R98 1081 aa25■■□□□ 1.59
CXCL12-204ENST00000395793 NCAPD2Q15021 1401 aa25■■□□□ 1.59
CXCL12-204ENST00000395793 CGNL1Q0VF96 1302 aa24.99■■□□□ 1.59
CXCL12-204ENST00000395793 QSER1Q2KHR3 1735 aa24.99■■□□□ 1.59
CXCL12-204ENST00000395793 PPP1R1BQ9UD71 204 aaPredicted RBP24.99■■□□□ 1.59
CXCL12-204ENST00000395793 TOGARAM1Q9Y4F4 1720 aa24.99■■□□□ 1.59
CXCL12-204ENST00000395793 PTGER2P43116 358 aa24.98■■□□□ 1.59
CXCL12-204ENST00000395793 SYTL4Q96C24 671 aaPredicted RBP24.98■■□□□ 1.59
CXCL12-204ENST00000395793 RAPGEF4Q8WZA2 1011 aa24.97■■□□□ 1.59
CXCL12-204ENST00000395793 ATF5Q9Y2D1 282 aaPredicted RBP24.96■■□□□ 1.59
CXCL12-204ENST00000395793 TATP17735 454 aaPredicted RBP24.95■■□□□ 1.58
CXCL12-204ENST00000395793 KCNQ4P56696 695 aa24.95■■□□□ 1.58
CXCL12-204ENST00000395793 PPM1GO15355 546 aaPredicted RBP24.94■■□□□ 1.58
CXCL12-204ENST00000395793 POLKQ9UBT6 870 aa24.94■■□□□ 1.58
CXCL12-204ENST00000395793 ITGB4P16144 1822 aa24.93■■□□□ 1.58
CXCL12-204ENST00000395793 WASHC2AQ641Q2 1341 aa24.93■■□□□ 1.58
CXCL12-204ENST00000395793 AKT1S1Q96B36 256 aa24.93■■□□□ 1.58
CXCL12-204ENST00000395793 SGIP1Q9BQI5 828 aa24.93■■□□□ 1.58
CXCL12-204ENST00000395793 SLC27A3Q5K4L6 730 aa24.92■■□□□ 1.58
CXCL12-204ENST00000395793 PCDH11XQ9BZA7 1347 aa24.91■■□□□ 1.58
CXCL12-204ENST00000395793 PCDH11YQ9BZA8 1340 aa24.91■■□□□ 1.58
CXCL12-204ENST00000395793 CYP27B1O15528 508 aa24.91■■□□□ 1.58
CXCL12-204ENST00000395793 MTFR1LQ9H019 292 aa24.91■■□□□ 1.58
CXCL12-204ENST00000395793 PANK3Q9H999 370 aa24.9■■□□□ 1.58
CXCL12-204ENST00000395793 COL24A1Q17RW2 1714 aa24.89■■□□□ 1.58
CXCL12-204ENST00000395793 EYA1Q99502 592 aa24.89■■□□□ 1.58
CXCL12-204ENST00000395793 TNNT2P45379 298 aaPredicted RBP24.88■■□□□ 1.57
CXCL12-204ENST00000395793 C5P01031 1676 aa24.88■■□□□ 1.57
CXCL12-204ENST00000395793 PNPLA7Q6ZV29 1317 aa24.86■■□□□ 1.57
CXCL12-204ENST00000395793 TAF1LQ8IZX4 1826 aa24.86■■□□□ 1.57
CXCL12-204ENST00000395793 EIF4A2Q14240 407 aaKnown RBP24.84■■□□□ 1.57
CXCL12-204ENST00000395793 CCNL1Q9UK58 526 aaPredicted RBP24.84■■□□□ 1.57
CXCL12-204ENST00000395793 FHDC1Q9C0D6 1143 aaPredicted RBP24.82■■□□□ 1.56
CXCL12-204ENST00000395793 PALLDQ8WX93 1383 aa24.8■■□□□ 1.56
CXCL12-204ENST00000395793 MPRIPQ6WCQ1 1025 aa24.8■■□□□ 1.56
CXCL12-204ENST00000395793 SYT17Q9BSW7 474 aa24.8■■□□□ 1.56
CXCL12-204ENST00000395793 NKX1-1Q15270 411 aaPredicted RBP24.79■■□□□ 1.56
CXCL12-204ENST00000395793 TFCP2L1Q9NZI6 479 aa24.79■■□□□ 1.56
CXCL12-204ENST00000395793 ARXQ96QS3 562 aa24.78■■□□□ 1.56
CXCL12-204ENST00000395793 SPG7Q9UQ90 795 aa24.78■■□□□ 1.56
CXCL12-204ENST00000395793 IGSF1Q8N6C5 1336 aa24.78■■□□□ 1.56
CXCL12-204ENST00000395793 SLC16A10Q8TF71 515 aa24.77■■□□□ 1.56
CXCL12-204ENST00000395793 KIF7Q2M1P5 1343 aa24.77■■□□□ 1.56
CXCL12-204ENST00000395793 C4BP0C0L5 1744 aa24.76■■□□□ 1.55
CXCL12-204ENST00000395793 PIGBQ92521 554 aa24.76■■□□□ 1.55
CXCL12-204ENST00000395793 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.76■■□□□ 1.55
CXCL12-204ENST00000395793 PHKG2P15735 406 aa24.75■■□□□ 1.55
CXCL12-204ENST00000395793 MAP3K5Q99683 1374 aa24.75■■□□□ 1.55
CXCL12-204ENST00000395793 MORC1Q86VD1 984 aa24.74■■□□□ 1.55
CXCL12-204ENST00000395793 UBR3Q6ZT12 1888 aa24.73■■□□□ 1.55
CXCL12-204ENST00000395793 COL23A1Q86Y22 540 aaPredicted RBP24.73■■□□□ 1.55
CXCL12-204ENST00000395793 PLEKHG2Q9H7P9 1386 aa24.72■■□□□ 1.55
CXCL12-204ENST00000395793 YY1P25490 414 aa24.71■■□□□ 1.55
CXCL12-204ENST00000395793 AMER1Q5JTC6 1135 aaPredicted RBP24.71■■□□□ 1.55
CXCL12-204ENST00000395793 IFNL2Q8IZJ0 200 aa24.71■■□□□ 1.55
CXCL12-204ENST00000395793 KNSTRNQ9Y448 316 aa24.71■■□□□ 1.55
CXCL12-204ENST00000395793 DCAF8L1A6NGE4 600 aa24.69■■□□□ 1.54
CXCL12-204ENST00000395793 AMIGO3Q86WK7 504 aa24.69■■□□□ 1.54
CXCL12-204ENST00000395793 SMARCC1Q92922 1105 aaPredicted RBP24.69■■□□□ 1.54
CXCL12-204ENST00000395793 AEBP1Q8IUX7 1158 aa24.68■■□□□ 1.54
CXCL12-204ENST00000395793 POLD1P28340 1107 aa24.67■■□□□ 1.54
CXCL12-204ENST00000395793 TMOD3Q9NYL9 352 aa24.67■■□□□ 1.54
CXCL12-204ENST00000395793 ASAP1Q9ULH1 1129 aa24.67■■□□□ 1.54
CXCL12-204ENST00000395793 KDM6AO15550 1401 aaPredicted RBP24.66■■□□□ 1.54
CXCL12-204ENST00000395793 MSH5O43196 834 aa24.65■■□□□ 1.54
CXCL12-204ENST00000395793 MSL1Q68DK7 614 aa24.65■■□□□ 1.54
CXCL12-204ENST00000395793 SMIM5Q71RC9 77 aa24.65■■□□□ 1.54
CXCL12-204ENST00000395793 LOC102724428A0A0B4J2F2 783 aa24.64■■□□□ 1.54
CXCL12-204ENST00000395793 PER1O15534 1290 aaPredicted RBP24.64■■□□□ 1.54
CXCL12-204ENST00000395793 SIK1P57059 783 aa24.64■■□□□ 1.54
CXCL12-204ENST00000395793 KLHL34Q8N239 644 aa24.64■■□□□ 1.54
CXCL12-204ENST00000395793 LINC00116Q8NCU8 138 aa24.64■■□□□ 1.54
CXCL12-204ENST00000395793 CHD4Q14839 1912 aa24.63■■□□□ 1.53
CXCL12-204ENST00000395793 IL13P35225 146 aa24.63■■□□□ 1.53
CXCL12-204ENST00000395793 ITPK1Q13572 414 aa24.63■■□□□ 1.53
CXCL12-204ENST00000395793 ATG3Q9NT62 314 aa24.62■■□□□ 1.53
CXCL12-204ENST00000395793 KDRP35968 1356 aa24.62■■□□□ 1.53
CXCL12-204ENST00000395793 ZNF530Q6P9A1 599 aaPredicted RBP24.61■■□□□ 1.53
CXCL12-204ENST00000395793 NLGN2Q8NFZ4 835 aa24.61■■□□□ 1.53
CXCL12-204ENST00000395793 ZNF831Q5JPB2 1677 aa24.61■■□□□ 1.53
CXCL12-204ENST00000395793 PLEKHO1Q53GL0 409 aaPredicted RBP24.6■■□□□ 1.53
CXCL12-204ENST00000395793 AK7Q96M32 723 aa24.6■■□□□ 1.53
CXCL12-204ENST00000395793 COL5A3P25940 1745 aaPredicted RBP24.6■■□□□ 1.53
CXCL12-204ENST00000395793 SULT6B1Q6IMI4 303 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms