RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 ZCRB1Q8TBF4 217 aaKnown RBP26.88■■□□□ 1.89
COL11A2-204ENST00000395194 NBPF4Q96M43 638 aa26.88■■□□□ 1.89
COL11A2-204ENST00000395194 PRIM1P49642 420 aaKnown RBP26.87■■□□□ 1.89
COL11A2-204ENST00000395194 KCNQ4P56696 695 aa26.87■■□□□ 1.89
COL11A2-204ENST00000395194 SMG6Q86US8 1419 aaKnown RBP26.86■■□□□ 1.89
COL11A2-204ENST00000395194 LY75O60449 1722 aa26.85■■□□□ 1.89
COL11A2-204ENST00000395194 UTRNP46939 3433 aa26.85■■□□□ 1.89
COL11A2-204ENST00000395194 FHDC1Q9C0D6 1143 aaPredicted RBP26.85■■□□□ 1.89
COL11A2-204ENST00000395194 CDCA8Q53HL2 280 aa26.84■■□□□ 1.89
COL11A2-204ENST00000395194 HSP90AB2PQ58FF8 381 aa26.84■■□□□ 1.89
COL11A2-204ENST00000395194 NSD2O96028 1365 aa26.84■■□□□ 1.89
COL11A2-204ENST00000395194 NSD3Q9BZ95 1437 aa26.83■■□□□ 1.89
COL11A2-204ENST00000395194 QSER1Q2KHR3 1735 aa26.83■■□□□ 1.89
COL11A2-204ENST00000395194 SGIP1Q9BQI5 828 aa26.83■■□□□ 1.89
COL11A2-204ENST00000395194 PCGF6Q9BYE7 350 aa26.82■■□□□ 1.88
COL11A2-204ENST00000395194 RAPGEF4Q8WZA2 1011 aa26.81■■□□□ 1.88
COL11A2-204ENST00000395194 SYT17Q9BSW7 474 aa26.81■■□□□ 1.88
COL11A2-204ENST00000395194 CARD14Q9BXL6 1004 aa26.81■■□□□ 1.88
COL11A2-204ENST00000395194 SLC27A3Q5K4L6 730 aa26.8■■□□□ 1.88
COL11A2-204ENST00000395194 AKT1S1Q96B36 256 aa26.8■■□□□ 1.88
COL11A2-204ENST00000395194 FLT4P35916 1363 aa26.8■■□□□ 1.88
COL11A2-204ENST00000395194 EMILIN1Q9Y6C2 1016 aa26.79■■□□□ 1.88
COL11A2-204ENST00000395194 INSRP06213 1382 aa26.79■■□□□ 1.88
COL11A2-204ENST00000395194 ARXQ96QS3 562 aa26.78■■□□□ 1.88
COL11A2-204ENST00000395194 MAP2P11137 1827 aaKnown RBP26.77■■□□□ 1.88
COL11A2-204ENST00000395194 TATP17735 454 aaPredicted RBP26.77■■□□□ 1.88
COL11A2-204ENST00000395194 POLR3GLQ9BT43 218 aa26.77■■□□□ 1.88
COL11A2-204ENST00000395194 PNPLA7Q6ZV29 1317 aa26.76■■□□□ 1.87
COL11A2-204ENST00000395194 TFCP2L1Q9NZI6 479 aa26.76■■□□□ 1.87
COL11A2-204ENST00000395194 CGNL1Q0VF96 1302 aa26.74■■□□□ 1.87
COL11A2-204ENST00000395194 PPM1GO15355 546 aaPredicted RBP26.74■■□□□ 1.87
COL11A2-204ENST00000395194 KLHL34Q8N239 644 aa26.74■■□□□ 1.87
COL11A2-204ENST00000395194 CCNL1Q9UK58 526 aaPredicted RBP26.74■■□□□ 1.87
COL11A2-204ENST00000395194 ANKRD26Q9UPS8 1709 aa26.73■■□□□ 1.87
COL11A2-204ENST00000395194 TOGARAM1Q9Y4F4 1720 aa26.73■■□□□ 1.87
COL11A2-204ENST00000395194 ITGB4P16144 1822 aa26.72■■□□□ 1.87
COL11A2-204ENST00000395194 PCDH11XQ9BZA7 1347 aa26.72■■□□□ 1.87
COL11A2-204ENST00000395194 PCDH11YQ9BZA8 1340 aa26.72■■□□□ 1.87
COL11A2-204ENST00000395194 KIF24Q5T7B8 1368 aa26.71■■□□□ 1.87
COL11A2-204ENST00000395194 CHD4Q14839 1912 aa26.71■■□□□ 1.87
COL11A2-204ENST00000395194 COL24A1Q17RW2 1714 aa26.7■■□□□ 1.87
COL11A2-204ENST00000395194 PKD1L3Q7Z443 1732 aa26.7■■□□□ 1.87
COL11A2-204ENST00000395194 C5P01031 1676 aa26.7■■□□□ 1.87
COL11A2-204ENST00000395194 TIMELESSQ9UNS1 1208 aa26.7■■□□□ 1.86
COL11A2-204ENST00000395194 TAF1LQ8IZX4 1826 aa26.68■■□□□ 1.86
COL11A2-204ENST00000395194 SLC16A10Q8TF71 515 aa26.68■■□□□ 1.86
COL11A2-204ENST00000395194 CYP27B1O15528 508 aa26.67■■□□□ 1.86
COL11A2-204ENST00000395194 MSH5O43196 834 aa26.67■■□□□ 1.86
COL11A2-204ENST00000395194 POLD1P28340 1107 aa26.67■■□□□ 1.86
COL11A2-204ENST00000395194 MPRIPQ6WCQ1 1025 aa26.67■■□□□ 1.86
COL11A2-204ENST00000395194 GOLGB1Q14789 3259 aaKnown RBP26.66■■□□□ 1.86
COL11A2-204ENST00000395194 CLSPNQ9HAW4 1339 aa26.65■■□□□ 1.86
COL11A2-204ENST00000395194 MAP3K5Q99683 1374 aa26.65■■□□□ 1.86
COL11A2-204ENST00000395194 TNNT2P45379 298 aaPredicted RBP26.64■■□□□ 1.86
COL11A2-204ENST00000395194 PALLDQ8WX93 1383 aa26.63■■□□□ 1.85
COL11A2-204ENST00000395194 COL23A1Q86Y22 540 aaPredicted RBP26.62■■□□□ 1.85
COL11A2-204ENST00000395194 NCAPD2Q15021 1401 aa26.62■■□□□ 1.85
COL11A2-204ENST00000395194 MSL1Q68DK7 614 aa26.61■■□□□ 1.85
COL11A2-204ENST00000395194 WASHC2AQ641Q2 1341 aa26.61■■□□□ 1.85
COL11A2-204ENST00000395194 PELP1Q8IZL8 1130 aaKnown RBP26.6■■□□□ 1.85
COL11A2-204ENST00000395194 EYA1Q99502 592 aa26.6■■□□□ 1.85
COL11A2-204ENST00000395194 POLKQ9UBT6 870 aa26.6■■□□□ 1.85
COL11A2-204ENST00000395194 GPR162Q16538 588 aa26.59■■□□□ 1.85
COL11A2-204ENST00000395194 HSPA5P11021 654 aaKnown RBP26.58■■□□□ 1.85
COL11A2-204ENST00000395194 NLGN2Q8NFZ4 835 aa26.58■■□□□ 1.85
COL11A2-204ENST00000395194 C4BP0C0L5 1744 aa26.58■■□□□ 1.85
COL11A2-204ENST00000395194 ZNF784Q8NCA9 323 aaPredicted RBP26.57■■□□□ 1.84
COL11A2-204ENST00000395194 EIF4G2P78344 907 aaKnown RBP eCLIP26.56■■□□□ 1.84
COL11A2-204ENST00000395194 SPG7Q9UQ90 795 aa26.56■■□□□ 1.84
COL11A2-204ENST00000395194 PIGBQ92521 554 aa26.55■■□□□ 1.84
COL11A2-204ENST00000395194 UBR3Q6ZT12 1888 aa26.54■■□□□ 1.84
COL11A2-204ENST00000395194 EIF4A2Q14240 407 aaKnown RBP26.53■■□□□ 1.84
COL11A2-204ENST00000395194 SMIM5Q71RC9 77 aa26.52■■□□□ 1.84
COL11A2-204ENST00000395194 CCER1Q8TC90 406 aaPredicted RBP26.52■■□□□ 1.84
COL11A2-204ENST00000395194 SMARCC1Q92922 1105 aaPredicted RBP26.52■■□□□ 1.84
COL11A2-204ENST00000395194 PANK3Q9H999 370 aa26.52■■□□□ 1.84
COL11A2-204ENST00000395194 NKX1-1Q15270 411 aaPredicted RBP26.51■■□□□ 1.83
COL11A2-204ENST00000395194 AMIGO3Q86WK7 504 aa26.51■■□□□ 1.83
COL11A2-204ENST00000395194 PHF14O94880 888 aa26.5■■□□□ 1.83
COL11A2-204ENST00000395194 AK7Q96M32 723 aa26.5■■□□□ 1.83
COL11A2-204ENST00000395194 TMOD3Q9NYL9 352 aa26.49■■□□□ 1.83
COL11A2-204ENST00000395194 PHKG2P15735 406 aa26.48■■□□□ 1.83
COL11A2-204ENST00000395194 IFNL2Q8IZJ0 200 aa26.48■■□□□ 1.83
COL11A2-204ENST00000395194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.47■■□□□ 1.83
COL11A2-204ENST00000395194 FLAD1Q8NFF5 587 aa26.46■■□□□ 1.83
COL11A2-204ENST00000395194 ASAP1Q9ULH1 1129 aa26.46■■□□□ 1.83
COL11A2-204ENST00000395194 LOC102724428A0A0B4J2F2 783 aa26.45■■□□□ 1.82
COL11A2-204ENST00000395194 SIK1P57059 783 aa26.45■■□□□ 1.82
COL11A2-204ENST00000395194 LINC00116Q8NCU8 138 aa26.45■■□□□ 1.82
COL11A2-204ENST00000395194 IGSF1Q8N6C5 1336 aa26.43■■□□□ 1.82
COL11A2-204ENST00000395194 YBX3P16989 372 aaKnown RBP eCLIP26.43■■□□□ 1.82
COL11A2-204ENST00000395194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.42■■□□□ 1.82
COL11A2-204ENST00000395194 HMGB2P26583 209 aaKnown RBP26.41■■□□□ 1.82
COL11A2-204ENST00000395194 ATP6V1AP38606 617 aa26.41■■□□□ 1.82
COL11A2-204ENST00000395194 ITPK1Q13572 414 aa26.41■■□□□ 1.82
COL11A2-204ENST00000395194 MORC1Q86VD1 984 aa26.4■■□□□ 1.82
COL11A2-204ENST00000395194 ATG3Q9NT62 314 aa26.39■■□□□ 1.82
COL11A2-204ENST00000395194 GNPATO15228 680 aa26.38■■□□□ 1.81
COL11A2-204ENST00000395194 AEBP1Q8IUX7 1158 aa26.37■■□□□ 1.81
COL11A2-204ENST00000395194 SSFA2P28290 1259 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms