RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
SNCA-205ENST00000394991 PRIM1P49642 420 aaKnown RBP22.53■■□□□ 1.2
SNCA-205ENST00000394991 TFCP2L1Q9NZI6 479 aa22.53■■□□□ 1.2
SNCA-205ENST00000394991 MEGF6O75095 1541 aa22.52■■□□□ 1.2
SNCA-205ENST00000394991 GIGYF1O75420 1035 aaPredicted RBP22.51■■□□□ 1.19
SNCA-205ENST00000394991 SYTL4Q96C24 671 aaPredicted RBP22.51■■□□□ 1.19
SNCA-205ENST00000394991 CARD11Q9BXL7 1154 aa22.51■■□□□ 1.19
SNCA-205ENST00000394991 C5P01031 1676 aa22.5■■□□□ 1.19
SNCA-205ENST00000394991 TERF2IPQ9NYB0 399 aa22.5■■□□□ 1.19
SNCA-205ENST00000394991 TAF1LQ8IZX4 1826 aa22.49■■□□□ 1.19
SNCA-205ENST00000394991 MAP3K19Q56UN5 1328 aa22.49■■□□□ 1.19
SNCA-205ENST00000394991 YBX3P16989 372 aaKnown RBP eCLIP22.48■■□□□ 1.19
SNCA-205ENST00000394991 FBLN1P23142 703 aa22.47■■□□□ 1.19
SNCA-205ENST00000394991 HOXC9P31274 260 aa22.47■■□□□ 1.19
SNCA-205ENST00000394991 CCNL1Q9UK58 526 aaPredicted RBP22.46■■□□□ 1.19
SNCA-205ENST00000394991 COL23A1Q86Y22 540 aaPredicted RBP22.45■■□□□ 1.18
SNCA-205ENST00000394991 ZCRB1Q8TBF4 217 aaKnown RBP22.45■■□□□ 1.18
SNCA-205ENST00000394991 PUS7Q96PZ0 661 aaKnown RBP22.44■■□□□ 1.18
SNCA-205ENST00000394991 AMPHP49418 695 aa22.42■■□□□ 1.18
SNCA-205ENST00000394991 COG3Q96JB2 828 aa22.42■■□□□ 1.18
SNCA-205ENST00000394991 USP47Q96K76 1375 aa22.41■■□□□ 1.18
SNCA-205ENST00000394991 ITGB4P16144 1822 aa22.41■■□□□ 1.18
SNCA-205ENST00000394991 TOGARAM1Q9Y4F4 1720 aa22.41■■□□□ 1.18
SNCA-205ENST00000394991 MSH5O43196 834 aa22.41■■□□□ 1.18
SNCA-205ENST00000394991 MSL1Q68DK7 614 aa22.41■■□□□ 1.18
SNCA-205ENST00000394991 CEP350Q5VT06 3117 aa22.41■■□□□ 1.18
SNCA-205ENST00000394991 RTL1A6NKG5 1358 aa22.4■■□□□ 1.18
SNCA-205ENST00000394991 GRIN3BO60391 1043 aa22.4■■□□□ 1.18
SNCA-205ENST00000394991 ATP10DQ9P241 1426 aa22.4■■□□□ 1.18
SNCA-205ENST00000394991 NBPF6Q5VWK0 638 aa22.39■■□□□ 1.17
SNCA-205ENST00000394991 USHBP1Q8N6Y0 703 aa22.39■■□□□ 1.17
SNCA-205ENST00000394991 NBPF4Q96M43 638 aa22.39■■□□□ 1.17
SNCA-205ENST00000394991 TESK2Q96S53 571 aa22.38■■□□□ 1.17
SNCA-205ENST00000394991 UBR3Q6ZT12 1888 aa22.38■■□□□ 1.17
SNCA-205ENST00000394991 C4BP0C0L5 1744 aa22.37■■□□□ 1.17
SNCA-205ENST00000394991 KIF20BQ96Q89 1820 aa22.36■■□□□ 1.17
SNCA-205ENST00000394991 RRS1Q15050 365 aaKnown RBP22.36■■□□□ 1.17
SNCA-205ENST00000394991 IFFO2Q5TF58 517 aa22.35■■□□□ 1.17
SNCA-205ENST00000394991 CGNL1Q0VF96 1302 aa22.34■■□□□ 1.17
SNCA-205ENST00000394991 PKD1L3Q7Z443 1732 aa22.34■■□□□ 1.17
SNCA-205ENST00000394991 ADCY9O60503 1353 aa22.33■■□□□ 1.17
SNCA-205ENST00000394991 PALLDQ8WX93 1383 aa22.33■■□□□ 1.17
SNCA-205ENST00000394991 MAP2P11137 1827 aaKnown RBP22.32■■□□□ 1.16
SNCA-205ENST00000394991 ST20-MTHFSA0A0A6YYL1 179 aa22.32■■□□□ 1.16
SNCA-205ENST00000394991 RAPGEF4Q8WZA2 1011 aa22.32■■□□□ 1.16
SNCA-205ENST00000394991 CD2APQ9Y5K6 639 aa22.32■■□□□ 1.16
SNCA-205ENST00000394991 SMG6Q86US8 1419 aaKnown RBP22.31■■□□□ 1.16
SNCA-205ENST00000394991 TONSLQ96HA7 1378 aa22.31■■□□□ 1.16
SNCA-205ENST00000394991 AMIGO3Q86WK7 504 aa22.31■■□□□ 1.16
SNCA-205ENST00000394991 FYB1O15117 783 aa22.3■■□□□ 1.16
SNCA-205ENST00000394991 GGNBP2Q9H3C7 697 aa22.3■■□□□ 1.16
SNCA-205ENST00000394991 PCDH11XQ9BZA7 1347 aa22.3■■□□□ 1.16
SNCA-205ENST00000394991 PCDH11YQ9BZA8 1340 aa22.3■■□□□ 1.16
SNCA-205ENST00000394991 TATP17735 454 aaPredicted RBP22.29■■□□□ 1.16
SNCA-205ENST00000394991 INSRP06213 1382 aa22.28■■□□□ 1.16
SNCA-205ENST00000394991 FLAD1Q8NFF5 587 aa22.28■■□□□ 1.16
SNCA-205ENST00000394991 CYP27B1O15528 508 aa22.27■■□□□ 1.16
SNCA-205ENST00000394991 HSP90AB2PQ58FF8 381 aa22.27■■□□□ 1.16
SNCA-205ENST00000394991 MPRIPQ6WCQ1 1025 aa22.27■■□□□ 1.16
SNCA-205ENST00000394991 SMIM5Q71RC9 77 aa22.26■■□□□ 1.15
SNCA-205ENST00000394991 GPBP1L1Q9HC44 474 aaPredicted RBP22.26■■□□□ 1.15
SNCA-205ENST00000394991 FLT4P35916 1363 aa22.25■■□□□ 1.15
SNCA-205ENST00000394991 ANKRD26Q9UPS8 1709 aa22.24■■□□□ 1.15
SNCA-205ENST00000394991 ZNF526Q8TF50 670 aaPredicted RBP22.24■■□□□ 1.15
SNCA-205ENST00000394991 IGSF1Q8N6C5 1336 aa22.24■■□□□ 1.15
SNCA-205ENST00000394991 AK7Q96M32 723 aa22.23■■□□□ 1.15
SNCA-205ENST00000394991 WWC3Q9ULE0 1092 aa22.23■■□□□ 1.15
SNCA-205ENST00000394991 KIAA1551Q9HCM1 1747 aa22.23■■□□□ 1.15
SNCA-205ENST00000394991 NCAPD2Q15021 1401 aa22.23■■□□□ 1.15
SNCA-205ENST00000394991 CICQ96RK0 1608 aaPredicted RBP22.22■■□□□ 1.15
SNCA-205ENST00000394991 PHF14O94880 888 aa22.22■■□□□ 1.15
SNCA-205ENST00000394991 KIF24Q5T7B8 1368 aa22.22■■□□□ 1.15
SNCA-205ENST00000394991 KIF13BQ9NQT8 1826 aa22.22■■□□□ 1.15
SNCA-205ENST00000394991 HSPA6P17066 643 aa22.21■■□□□ 1.15
SNCA-205ENST00000394991 SMARCC1Q92922 1105 aaPredicted RBP22.21■■□□□ 1.15
SNCA-205ENST00000394991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.2■■□□□ 1.14
SNCA-205ENST00000394991 HMGB2P26583 209 aaKnown RBP22.2■■□□□ 1.14
SNCA-205ENST00000394991 PIGBQ92521 554 aa22.2■■□□□ 1.14
SNCA-205ENST00000394991 NSD3Q9BZ95 1437 aa22.19■■□□□ 1.14
SNCA-205ENST00000394991 N4BP2Q86UW6 1770 aaPredicted RBP22.18■■□□□ 1.14
SNCA-205ENST00000394991 SLC24A1O60721 1099 aa22.18■■□□□ 1.14
SNCA-205ENST00000394991 LINC00116Q8NCU8 138 aa22.18■■□□□ 1.14
SNCA-205ENST00000394991 EMILIN1Q9Y6C2 1016 aa22.17■■□□□ 1.14
SNCA-205ENST00000394991 SSFA2P28290 1259 aa22.16■■□□□ 1.14
SNCA-205ENST00000394991 NKX1-1Q15270 411 aaPredicted RBP22.16■■□□□ 1.14
SNCA-205ENST00000394991 LOC102724428A0A0B4J2F2 783 aa22.15■■□□□ 1.14
SNCA-205ENST00000394991 KIF3CO14782 793 aa22.15■■□□□ 1.14
SNCA-205ENST00000394991 SIK1P57059 783 aa22.15■■□□□ 1.14
SNCA-205ENST00000394991 TMF1P82094 1093 aa22.15■■□□□ 1.14
SNCA-205ENST00000394991 ITPK1Q13572 414 aa22.13■■□□□ 1.13
SNCA-205ENST00000394991 CARD14Q9BXL6 1004 aa22.13■■□□□ 1.13
SNCA-205ENST00000394991 PXDNLA1KZ92 1463 aa22.13■■□□□ 1.13
SNCA-205ENST00000394991 BRCA1P38398 1863 aaKnown RBP22.13■■□□□ 1.13
SNCA-205ENST00000394991 GNPATO15228 680 aa22.11■■□□□ 1.13
SNCA-205ENST00000394991 ASAP1Q9ULH1 1129 aa22.11■■□□□ 1.13
SNCA-205ENST00000394991 COL5A3P25940 1745 aaPredicted RBP22.11■■□□□ 1.13
SNCA-205ENST00000394991 SPG7Q9UQ90 795 aa22.1■■□□□ 1.13
SNCA-205ENST00000394991 ZNF831Q5JPB2 1677 aa22.1■■□□□ 1.13
SNCA-205ENST00000394991 EYA1Q99502 592 aa22.09■■□□□ 1.13
SNCA-205ENST00000394991 TMOD3Q9NYL9 352 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms