RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PREX1Q8TCU6 1659 aa19.75■□□□□ 0.75
SMARCD1-202ENST00000394963 PTCD1O75127 700 aaKnown RBP19.74■□□□□ 0.75
SMARCD1-202ENST00000394963 ALDH1L2Q3SY69 923 aa19.74■□□□□ 0.75
SMARCD1-202ENST00000394963 KCNQ3O43525 872 aa19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 TAF7Q15545 349 aaPredicted RBP19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 FOXD4L6Q3SYB3 417 aaPredicted RBP19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 FOXD4L3Q6VB84 417 aaPredicted RBP19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 PHAXQ9H814 394 aaKnown RBP19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 PLEKHG1Q9ULL1 1385 aa19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 ARHGEF40Q8TER5 1519 aa19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 UBTFL1P0CB47 393 aaPredicted RBP19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 CASC1Q6TDU7 716 aa19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 TTC5Q8N0Z6 440 aa19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 PPLO60437 1756 aa19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 SURF6O75683 361 aaKnown RBP19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 NCLP19338 710 aaKnown RBP19.73■□□□□ 0.75
SMARCD1-202ENST00000394963 FLT4P35916 1363 aa19.72■□□□□ 0.75
SMARCD1-202ENST00000394963 ZBTB40Q9NUA8 1239 aa19.72■□□□□ 0.75
SMARCD1-202ENST00000394963 TTC21AQ8NDW8 1320 aa19.72■□□□□ 0.75
SMARCD1-202ENST00000394963 FLIIQ13045 1269 aa19.72■□□□□ 0.75
SMARCD1-202ENST00000394963 IL16Q14005 1332 aa19.71■□□□□ 0.75
SMARCD1-202ENST00000394963 SETBP1Q9Y6X0 1596 aa19.71■□□□□ 0.75
SMARCD1-202ENST00000394963 SIL1Q9H173 461 aa19.71■□□□□ 0.75
SMARCD1-202ENST00000394963 TMEM131LA2VDJ0 1609 aa19.71■□□□□ 0.75
SMARCD1-202ENST00000394963 FRAT2O75474 233 aaPredicted RBP19.71■□□□□ 0.75
SMARCD1-202ENST00000394963 KCNH5Q8NCM2 988 aa19.7■□□□□ 0.74
SMARCD1-202ENST00000394963 OTUD7AQ8TE49 926 aaPredicted RBP19.7■□□□□ 0.74
SMARCD1-202ENST00000394963 PIP4K2BP78356 416 aa19.7■□□□□ 0.74
SMARCD1-202ENST00000394963 RIC3Q7Z5B4 369 aa19.7■□□□□ 0.74
SMARCD1-202ENST00000394963 NLRP1Q9C000 1473 aa19.69■□□□□ 0.74
SMARCD1-202ENST00000394963 CPS1P31327 1500 aa19.69■□□□□ 0.74
SMARCD1-202ENST00000394963 IL17REQ8NFR9 667 aa19.69■□□□□ 0.74
SMARCD1-202ENST00000394963 NUTM2BA6NNL0 878 aaPredicted RBP19.68■□□□□ 0.74
SMARCD1-202ENST00000394963 NUTM2EB1AL46 878 aaPredicted RBP19.68■□□□□ 0.74
SMARCD1-202ENST00000394963 ZBTB7BO15156 539 aaPredicted RBP19.68■□□□□ 0.74
SMARCD1-202ENST00000394963 NUTM2AQ8IVF1 878 aaPredicted RBP19.68■□□□□ 0.74
SMARCD1-202ENST00000394963 CHPF2Q9P2E5 772 aa19.68■□□□□ 0.74
SMARCD1-202ENST00000394963 USP6P35125 1406 aa19.68■□□□□ 0.74
SMARCD1-202ENST00000394963 KCNJ4P48050 445 aa19.68■□□□□ 0.74
SMARCD1-202ENST00000394963 LRRFIP2Q9Y608 721 aaKnown RBP19.68■□□□□ 0.74
SMARCD1-202ENST00000394963 PI4KAP2A4QPH2 592 aa19.67■□□□□ 0.74
SMARCD1-202ENST00000394963 PI4KAP1Q8N8J0 262 aa19.67■□□□□ 0.74
SMARCD1-202ENST00000394963 ADAMTS13Q76LX8 1427 aa19.67■□□□□ 0.74
SMARCD1-202ENST00000394963 NFKBIBQ15653 356 aa19.67■□□□□ 0.74
SMARCD1-202ENST00000394963 PTPRUQ92729 1446 aa19.67■□□□□ 0.74
SMARCD1-202ENST00000394963 TATP17735 454 aaPredicted RBP19.67■□□□□ 0.74
SMARCD1-202ENST00000394963 CCDC85AQ96PX6 553 aaPredicted RBP19.67■□□□□ 0.74
SMARCD1-202ENST00000394963 C19orf44Q9H6X5 657 aa19.67■□□□□ 0.74
SMARCD1-202ENST00000394963 GNAI2P04899 355 aa19.66■□□□□ 0.74
SMARCD1-202ENST00000394963 NUTM1Q86Y26 1132 aa19.66■□□□□ 0.74
SMARCD1-202ENST00000394963 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
SMARCD1-202ENST00000394963 FAM177BA6PVY3 158 aa19.65■□□□□ 0.74
SMARCD1-202ENST00000394963 CHL1O00533 1208 aa19.65■□□□□ 0.74
SMARCD1-202ENST00000394963 SRGAP3O43295 1099 aa19.65■□□□□ 0.74
SMARCD1-202ENST00000394963 ANO2Q9NQ90 1003 aa19.64■□□□□ 0.74
SMARCD1-202ENST00000394963 CD163L1Q9NR16 1453 aa19.64■□□□□ 0.73
SMARCD1-202ENST00000394963 NFATC2IPQ8NCF5 419 aa19.64■□□□□ 0.73
SMARCD1-202ENST00000394963 MYOM1P52179 1685 aa19.63■□□□□ 0.73
SMARCD1-202ENST00000394963 SIRT1Q96EB6 747 aa19.63■□□□□ 0.73
SMARCD1-202ENST00000394963 SRCIN1Q9C0H9 1055 aa19.63■□□□□ 0.73
SMARCD1-202ENST00000394963 PRAMEF22A3QJZ6 481 aa19.63■□□□□ 0.73
SMARCD1-202ENST00000394963 ADAMTS2O95450 1211 aa19.63■□□□□ 0.73
SMARCD1-202ENST00000394963 IP6K1Q92551 441 aa19.63■□□□□ 0.73
SMARCD1-202ENST00000394963 ZC3H13Q5T200 1668 aaKnown RBP19.62■□□□□ 0.73
SMARCD1-202ENST00000394963 GCC1Q96CN9 775 aa19.62■□□□□ 0.73
SMARCD1-202ENST00000394963 RBM42Q9BTD8 480 aaKnown RBP19.62■□□□□ 0.73
SMARCD1-202ENST00000394963 ATP7BP35670 1465 aa19.62■□□□□ 0.73
SMARCD1-202ENST00000394963 AXIN2Q9Y2T1 843 aa19.62■□□□□ 0.73
SMARCD1-202ENST00000394963 CABP4P57796 275 aa19.61■□□□□ 0.73
SMARCD1-202ENST00000394963 FAM135BQ49AJ0 1406 aa19.61■□□□□ 0.73
SMARCD1-202ENST00000394963 SBNO1A3KN83 1393 aa19.61■□□□□ 0.73
SMARCD1-202ENST00000394963 ARHGEF28Q8N1W1 1705 aaKnown RBP19.6■□□□□ 0.73
SMARCD1-202ENST00000394963 KIAA1210Q9ULL0 1709 aa19.6■□□□□ 0.73
SMARCD1-202ENST00000394963 ATP5J2-PTCD1G3V325 749 aa19.6■□□□□ 0.73
SMARCD1-202ENST00000394963 CWF19L2Q2TBE0 894 aaKnown RBP19.59■□□□□ 0.73
SMARCD1-202ENST00000394963 NAP1L2Q9ULW6 460 aaPredicted RBP19.59■□□□□ 0.73
SMARCD1-202ENST00000394963 GNAI3P08754 354 aa19.59■□□□□ 0.73
SMARCD1-202ENST00000394963 CCT4P50991 539 aaKnown RBP19.59■□□□□ 0.73
SMARCD1-202ENST00000394963 AAMPQ13685 434 aa19.59■□□□□ 0.73
SMARCD1-202ENST00000394963 CPSF1Q10570 1443 aaKnown RBP19.58■□□□□ 0.73
SMARCD1-202ENST00000394963 HDAC1Q13547 482 aaPredicted RBP19.58■□□□□ 0.73
SMARCD1-202ENST00000394963 NUCB1Q02818 461 aa19.58■□□□□ 0.72
SMARCD1-202ENST00000394963 NEXNQ0ZGT2 675 aa19.58■□□□□ 0.72
SMARCD1-202ENST00000394963 MSH6P52701 1360 aa19.58■□□□□ 0.72
SMARCD1-202ENST00000394963 MYO3AQ8NEV4 1616 aa19.57■□□□□ 0.72
SMARCD1-202ENST00000394963 CADPS2Q86UW7 1296 aa19.57■□□□□ 0.72
SMARCD1-202ENST00000394963 AGLP35573 1532 aa19.57■□□□□ 0.72
SMARCD1-202ENST00000394963 MAP3K2Q9Y2U5 619 aa19.56■□□□□ 0.72
SMARCD1-202ENST00000394963 DTNBO60941 627 aa19.56■□□□□ 0.72
SMARCD1-202ENST00000394963 PNPLA6Q8IY17 1366 aa19.56■□□□□ 0.72
SMARCD1-202ENST00000394963 TBC1D9Q6ZT07 1266 aa19.56■□□□□ 0.72
SMARCD1-202ENST00000394963 USP19O94966 1318 aa19.56■□□□□ 0.72
SMARCD1-202ENST00000394963 LRRC7Q96NW7 1537 aa19.56■□□□□ 0.72
SMARCD1-202ENST00000394963 CDC45O75419 566 aa19.55■□□□□ 0.72
SMARCD1-202ENST00000394963 SMC5Q8IY18 1101 aa19.55■□□□□ 0.72
SMARCD1-202ENST00000394963 TBC1D2Q9BYX2 928 aa19.55■□□□□ 0.72
SMARCD1-202ENST00000394963 TMEM94Q12767 1356 aa19.55■□□□□ 0.72
SMARCD1-202ENST00000394963 SIRT2Q8IXJ6 389 aa19.55■□□□□ 0.72
SMARCD1-202ENST00000394963 LARP6Q9BRS8 491 aaKnown RBP19.55■□□□□ 0.72
SMARCD1-202ENST00000394963 LRRCC1Q9C099 1032 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms