RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 EIF4A2Q14240 407 aaKnown RBP25.57■■□□□ 1.68
TRPT1-202ENST00000394546 EYA1Q99502 592 aa25.57■■□□□ 1.68
TRPT1-202ENST00000394546 PTF1AQ7RTS3 328 aa25.56■■□□□ 1.68
TRPT1-202ENST00000394546 PCDH11XQ9BZA7 1347 aa25.56■■□□□ 1.68
TRPT1-202ENST00000394546 PCDH11YQ9BZA8 1340 aa25.56■■□□□ 1.68
TRPT1-202ENST00000394546 PSDA5PKW4 1024 aaPredicted RBP25.55■■□□□ 1.68
TRPT1-202ENST00000394546 R3HDM1Q15032 1099 aaKnown RBP25.54■■□□□ 1.68
TRPT1-202ENST00000394546 SPG7Q9UQ90 795 aa25.54■■□□□ 1.68
TRPT1-202ENST00000394546 NPC1L1Q9UHC9 1359 aa25.54■■□□□ 1.68
TRPT1-202ENST00000394546 CC2D1BQ5T0F9 858 aaKnown RBP25.53■■□□□ 1.68
TRPT1-202ENST00000394546 NCAPD2Q15021 1401 aa25.53■■□□□ 1.68
TRPT1-202ENST00000394546 RGPD3A6NKT7 1758 aaPredicted RBP25.52■■□□□ 1.68
TRPT1-202ENST00000394546 RGPD4Q7Z3J3 1758 aa25.52■■□□□ 1.68
TRPT1-202ENST00000394546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.52■■□□□ 1.68
TRPT1-202ENST00000394546 NHSQ6T4R5 1651 aa25.52■■□□□ 1.68
TRPT1-202ENST00000394546 SYTL4Q96C24 671 aaPredicted RBP25.51■■□□□ 1.67
TRPT1-202ENST00000394546 PRIM1P49642 420 aaKnown RBP25.5■■□□□ 1.67
TRPT1-202ENST00000394546 TXNRD1Q16881 649 aa25.5■■□□□ 1.67
TRPT1-202ENST00000394546 RREB1Q92766 1687 aa25.5■■□□□ 1.67
TRPT1-202ENST00000394546 PLEKHG2Q9H7P9 1386 aa25.49■■□□□ 1.67
TRPT1-202ENST00000394546 IGSF1Q8N6C5 1336 aa25.47■■□□□ 1.67
TRPT1-202ENST00000394546 MTHFSP49914 203 aa25.47■■□□□ 1.67
TRPT1-202ENST00000394546 PROM2Q8N271 834 aa25.47■■□□□ 1.67
TRPT1-202ENST00000394546 KAT6BQ8WYB5 2073 aa25.47■■□□□ 1.67
TRPT1-202ENST00000394546 NUP188Q5SRE5 1749 aa25.45■■□□□ 1.66
TRPT1-202ENST00000394546 CYP27B1O15528 508 aa25.44■■□□□ 1.66
TRPT1-202ENST00000394546 STK32BQ9NY57 414 aa25.44■■□□□ 1.66
TRPT1-202ENST00000394546 HMGB2P26583 209 aaKnown RBP25.43■■□□□ 1.66
TRPT1-202ENST00000394546 CNGB1Q14028 1251 aaPredicted RBP25.43■■□□□ 1.66
TRPT1-202ENST00000394546 SLC27A3Q5K4L6 730 aa25.43■■□□□ 1.66
TRPT1-202ENST00000394546 IFNL2Q8IZJ0 200 aa25.43■■□□□ 1.66
TRPT1-202ENST00000394546 IL13P35225 146 aa25.42■■□□□ 1.66
TRPT1-202ENST00000394546 NKX1-1Q15270 411 aaPredicted RBP25.42■■□□□ 1.66
TRPT1-202ENST00000394546 AMOTQ4VCS5 1084 aa25.42■■□□□ 1.66
TRPT1-202ENST00000394546 PLEKHO1Q53GL0 409 aaPredicted RBP25.42■■□□□ 1.66
TRPT1-202ENST00000394546 SHANK3Q9BYB0 1731 aa25.42■■□□□ 1.66
TRPT1-202ENST00000394546 BTAF1O14981 1849 aa25.4■■□□□ 1.66
TRPT1-202ENST00000394546 DIAPH1O60610 1272 aaKnown RBP25.39■■□□□ 1.66
TRPT1-202ENST00000394546 SULT6B1Q6IMI4 303 aa25.39■■□□□ 1.66
TRPT1-202ENST00000394546 PKD1L3Q7Z443 1732 aa25.38■■□□□ 1.65
TRPT1-202ENST00000394546 HSP90AB1P08238 724 aaKnown RBP25.38■■□□□ 1.65
TRPT1-202ENST00000394546 PHKG2P15735 406 aa25.37■■□□□ 1.65
TRPT1-202ENST00000394546 SLC15A2Q16348 729 aa25.37■■□□□ 1.65
TRPT1-202ENST00000394546 MPRIPQ6WCQ1 1025 aa25.37■■□□□ 1.65
TRPT1-202ENST00000394546 DOT1LQ8TEK3 1739 aa25.37■■□□□ 1.65
TRPT1-202ENST00000394546 ANO8Q9HCE9 1232 aaPredicted RBP25.36■■□□□ 1.65
TRPT1-202ENST00000394546 ZEB1P37275 1124 aaPredicted RBP25.35■■□□□ 1.65
TRPT1-202ENST00000394546 SMARCC1Q92922 1105 aaPredicted RBP25.35■■□□□ 1.65
TRPT1-202ENST00000394546 CFAP53Q96M91 514 aa25.35■■□□□ 1.65
TRPT1-202ENST00000394546 AEBP1Q8IUX7 1158 aa25.34■■□□□ 1.65
TRPT1-202ENST00000394546 SRCAPQ6ZRS2 3230 aa25.33■■□□□ 1.65
TRPT1-202ENST00000394546 KDRP35968 1356 aa25.33■■□□□ 1.65
TRPT1-202ENST00000394546 C1orf141Q5JVX7 400 aa25.33■■□□□ 1.65
TRPT1-202ENST00000394546 ZNF530Q6P9A1 599 aaPredicted RBP25.33■■□□□ 1.65
TRPT1-202ENST00000394546 LRRC4BQ9NT99 713 aa25.32■■□□□ 1.64
TRPT1-202ENST00000394546 TMOD3Q9NYL9 352 aa25.32■■□□□ 1.64
TRPT1-202ENST00000394546 CCNL1Q9UK58 526 aaPredicted RBP25.32■■□□□ 1.64
TRPT1-202ENST00000394546 LRP5O75197 1615 aa25.32■■□□□ 1.64
TRPT1-202ENST00000394546 DCAF5Q96JK2 942 aa25.31■■□□□ 1.64
TRPT1-202ENST00000394546 SPON1Q9HCB6 807 aa25.31■■□□□ 1.64
TRPT1-202ENST00000394546 ERVV-2B6SEH9 535 aa25.29■■□□□ 1.64
TRPT1-202ENST00000394546 PIGBQ92521 554 aa25.29■■□□□ 1.64
TRPT1-202ENST00000394546 PALLDQ8WX93 1383 aa25.28■■□□□ 1.64
TRPT1-202ENST00000394546 HMOX1P09601 288 aa25.27■■□□□ 1.64
TRPT1-202ENST00000394546 U2SURPO15042 1029 aaKnown RBP25.26■■□□□ 1.63
TRPT1-202ENST00000394546 NUDCQ9Y266 331 aa25.26■■□□□ 1.63
TRPT1-202ENST00000394546 PPP2R1AP30153 589 aa25.25■■□□□ 1.63
TRPT1-202ENST00000394546 AKT1S1Q96B36 256 aa25.25■■□□□ 1.63
TRPT1-202ENST00000394546 TFCP2L1Q9NZI6 479 aa25.25■■□□□ 1.63
TRPT1-202ENST00000394546 KCNQ4P56696 695 aa25.23■■□□□ 1.63
TRPT1-202ENST00000394546 CABP4P57796 275 aa25.23■■□□□ 1.63
TRPT1-202ENST00000394546 ZNF827Q17R98 1081 aa25.23■■□□□ 1.63
TRPT1-202ENST00000394546 AKAP4Q5JQC9 854 aa25.23■■□□□ 1.63
TRPT1-202ENST00000394546 PPP1R1BQ9UD71 204 aaPredicted RBP25.23■■□□□ 1.63
TRPT1-202ENST00000394546 LY75O60449 1722 aa25.23■■□□□ 1.63
TRPT1-202ENST00000394546 PAPPAQ13219 1627 aa25.23■■□□□ 1.63
TRPT1-202ENST00000394546 ZBTB7AO95365 584 aa25.21■■□□□ 1.63
TRPT1-202ENST00000394546 MTFR1LQ9H019 292 aa25.21■■□□□ 1.63
TRPT1-202ENST00000394546 TOGARAM1Q9Y4F4 1720 aa25.2■■□□□ 1.63
TRPT1-202ENST00000394546 ITGB4P16144 1822 aa25.2■■□□□ 1.62
TRPT1-202ENST00000394546 COL3A1P02461 1466 aaPredicted RBP25.2■■□□□ 1.62
TRPT1-202ENST00000394546 SLC16A10Q8TF71 515 aa25.19■■□□□ 1.62
TRPT1-202ENST00000394546 PDGFDQ9GZP0 370 aaPredicted RBP25.19■■□□□ 1.62
TRPT1-202ENST00000394546 ASAP1Q9ULH1 1129 aa25.19■■□□□ 1.62
TRPT1-202ENST00000394546 LOC102724428A0A0B4J2F2 783 aa25.18■■□□□ 1.62
TRPT1-202ENST00000394546 SIK1P57059 783 aa25.18■■□□□ 1.62
TRPT1-202ENST00000394546 DDX10Q13206 875 aaKnown RBP25.17■■□□□ 1.62
TRPT1-202ENST00000394546 ATG3Q9NT62 314 aa25.17■■□□□ 1.62
TRPT1-202ENST00000394546 CASZ1Q86V15 1759 aa25.16■■□□□ 1.62
TRPT1-202ENST00000394546 KDM6AO15550 1401 aaPredicted RBP25.16■■□□□ 1.62
TRPT1-202ENST00000394546 MTHFSDQ2M296 383 aaKnown RBP25.16■■□□□ 1.62
TRPT1-202ENST00000394546 FLAD1Q8NFF5 587 aa25.16■■□□□ 1.62
TRPT1-202ENST00000394546 ATF5Q9Y2D1 282 aaPredicted RBP25.16■■□□□ 1.62
TRPT1-202ENST00000394546 RALBP1Q15311 655 aa25.15■■□□□ 1.62
TRPT1-202ENST00000394546 GAS2L2Q8NHY3 880 aa25.15■■□□□ 1.62
TRPT1-202ENST00000394546 U2AF1L5P0DN76 240 aaPredicted RBP25.14■■□□□ 1.62
TRPT1-202ENST00000394546 ATP6V1AP38606 617 aa25.14■■□□□ 1.62
TRPT1-202ENST00000394546 U2AF1Q01081 240 aaKnown RBP eCLIP25.14■■□□□ 1.62
TRPT1-202ENST00000394546 NFATC2IPQ8NCF5 419 aa25.14■■□□□ 1.62
TRPT1-202ENST00000394546 AK7Q96M32 723 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms