RNA–Protein interactions for RNA: ENST00000394011.7

RALGPS1-206, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

TSL 1 (best) BASIC

Gene RALGPS1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-206ENST00000394011 PTGER2P43116 358 aa27.22■■□□□ 1.95
RALGPS1-206ENST00000394011 HSP90AB2PQ58FF8 381 aa27.22■■□□□ 1.95
RALGPS1-206ENST00000394011 EIF4G2P78344 907 aaKnown RBP eCLIP27.21■■□□□ 1.95
RALGPS1-206ENST00000394011 LY75O60449 1722 aa27.21■■□□□ 1.95
RALGPS1-206ENST00000394011 KIF24Q5T7B8 1368 aa27.21■■□□□ 1.95
RALGPS1-206ENST00000394011 ZBTB7AO95365 584 aa27.2■■□□□ 1.94
RALGPS1-206ENST00000394011 USHBP1Q8N6Y0 703 aa27.19■■□□□ 1.94
RALGPS1-206ENST00000394011 ZCRB1Q8TBF4 217 aaKnown RBP27.19■■□□□ 1.94
RALGPS1-206ENST00000394011 FLT4P35916 1363 aa27.19■■□□□ 1.94
RALGPS1-206ENST00000394011 ZNF827Q17R98 1081 aa27.18■■□□□ 1.94
RALGPS1-206ENST00000394011 QSER1Q2KHR3 1735 aa27.17■■□□□ 1.94
RALGPS1-206ENST00000394011 PPP1R1BQ9UD71 204 aaPredicted RBP27.17■■□□□ 1.94
RALGPS1-206ENST00000394011 HSPA5P11021 654 aaKnown RBP27.16■■□□□ 1.94
RALGPS1-206ENST00000394011 PRIM1P49642 420 aaKnown RBP27.16■■□□□ 1.94
RALGPS1-206ENST00000394011 SGIP1Q9BQI5 828 aa27.16■■□□□ 1.94
RALGPS1-206ENST00000394011 EMILIN1Q9Y6C2 1016 aa27.16■■□□□ 1.94
RALGPS1-206ENST00000394011 MAP2P11137 1827 aaKnown RBP27.16■■□□□ 1.94
RALGPS1-206ENST00000394011 TUBGCP6Q96RT7 1819 aa27.16■■□□□ 1.94
RALGPS1-206ENST00000394011 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
RALGPS1-206ENST00000394011 NCAPD2Q15021 1401 aa27.15■■□□□ 1.94
RALGPS1-206ENST00000394011 ATF5Q9Y2D1 282 aaPredicted RBP27.14■■□□□ 1.94
RALGPS1-206ENST00000394011 CGNL1Q0VF96 1302 aa27.14■■□□□ 1.93
RALGPS1-206ENST00000394011 AKT1S1Q96B36 256 aa27.13■■□□□ 1.93
RALGPS1-206ENST00000394011 PKD1L3Q7Z443 1732 aa27.12■■□□□ 1.93
RALGPS1-206ENST00000394011 COL24A1Q17RW2 1714 aa27.11■■□□□ 1.93
RALGPS1-206ENST00000394011 SLC27A3Q5K4L6 730 aa27.11■■□□□ 1.93
RALGPS1-206ENST00000394011 MTFR1LQ9H019 292 aa27.11■■□□□ 1.93
RALGPS1-206ENST00000394011 TOGARAM1Q9Y4F4 1720 aa27.1■■□□□ 1.93
RALGPS1-206ENST00000394011 RAPGEF4Q8WZA2 1011 aa27.09■■□□□ 1.93
RALGPS1-206ENST00000394011 SYTL4Q96C24 671 aaPredicted RBP27.09■■□□□ 1.93
RALGPS1-206ENST00000394011 KCNQ4P56696 695 aa27.08■■□□□ 1.93
RALGPS1-206ENST00000394011 TATP17735 454 aaPredicted RBP27.07■■□□□ 1.92
RALGPS1-206ENST00000394011 POLR3GLQ9BT43 218 aa27.07■■□□□ 1.92
RALGPS1-206ENST00000394011 WASHC2AQ641Q2 1341 aa27.06■■□□□ 1.92
RALGPS1-206ENST00000394011 ITGB4P16144 1822 aa27.05■■□□□ 1.92
RALGPS1-206ENST00000394011 CYP27B1O15528 508 aa27.05■■□□□ 1.92
RALGPS1-206ENST00000394011 POLKQ9UBT6 870 aa27.04■■□□□ 1.92
RALGPS1-206ENST00000394011 PNPLA7Q6ZV29 1317 aa27.04■■□□□ 1.92
RALGPS1-206ENST00000394011 PCDH11XQ9BZA7 1347 aa27.04■■□□□ 1.92
RALGPS1-206ENST00000394011 PCDH11YQ9BZA8 1340 aa27.04■■□□□ 1.92
RALGPS1-206ENST00000394011 UTRNP46939 3433 aa27.01■■□□□ 1.91
RALGPS1-206ENST00000394011 SYT17Q9BSW7 474 aa27.01■■□□□ 1.91
RALGPS1-206ENST00000394011 FHDC1Q9C0D6 1143 aaPredicted RBP27.01■■□□□ 1.91
RALGPS1-206ENST00000394011 TAF1LQ8IZX4 1826 aa27■■□□□ 1.91
RALGPS1-206ENST00000394011 EYA1Q99502 592 aa27■■□□□ 1.91
RALGPS1-206ENST00000394011 C5P01031 1676 aa26.99■■□□□ 1.91
RALGPS1-206ENST00000394011 PPM1GO15355 546 aaPredicted RBP26.99■■□□□ 1.91
RALGPS1-206ENST00000394011 CCNL1Q9UK58 526 aaPredicted RBP26.98■■□□□ 1.91
RALGPS1-206ENST00000394011 PANK3Q9H999 370 aa26.97■■□□□ 1.91
RALGPS1-206ENST00000394011 MAP3K5Q99683 1374 aa26.97■■□□□ 1.91
RALGPS1-206ENST00000394011 NKX1-1Q15270 411 aaPredicted RBP26.96■■□□□ 1.91
RALGPS1-206ENST00000394011 SLC16A10Q8TF71 515 aa26.96■■□□□ 1.91
RALGPS1-206ENST00000394011 ARXQ96QS3 562 aa26.96■■□□□ 1.91
RALGPS1-206ENST00000394011 YY1P25490 414 aa26.94■■□□□ 1.9
RALGPS1-206ENST00000394011 EIF4A2Q14240 407 aaKnown RBP26.94■■□□□ 1.9
RALGPS1-206ENST00000394011 TFCP2L1Q9NZI6 479 aa26.94■■□□□ 1.9
RALGPS1-206ENST00000394011 TNNT2P45379 298 aaPredicted RBP26.92■■□□□ 1.9
RALGPS1-206ENST00000394011 MPRIPQ6WCQ1 1025 aa26.92■■□□□ 1.9
RALGPS1-206ENST00000394011 PALLDQ8WX93 1383 aa26.92■■□□□ 1.9
RALGPS1-206ENST00000394011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.91■■□□□ 1.99e-6■□□□□ 9.4
RALGPS1-206ENST00000394011 COL23A1Q86Y22 540 aaPredicted RBP26.89■■□□□ 1.9
RALGPS1-206ENST00000394011 PIGBQ92521 554 aa26.89■■□□□ 1.9
RALGPS1-206ENST00000394011 C4BP0C0L5 1744 aa26.88■■□□□ 1.89
RALGPS1-206ENST00000394011 DCAF8L1A6NGE4 600 aa26.88■■□□□ 1.89
RALGPS1-206ENST00000394011 SPG7Q9UQ90 795 aa26.88■■□□□ 1.89
RALGPS1-206ENST00000394011 IGSF1Q8N6C5 1336 aa26.88■■□□□ 1.89
RALGPS1-206ENST00000394011 PLEKHG2Q9H7P9 1386 aa26.86■■□□□ 1.89
RALGPS1-206ENST00000394011 PHKG2P15735 406 aa26.86■■□□□ 1.89
RALGPS1-206ENST00000394011 UBR3Q6ZT12 1888 aa26.85■■□□□ 1.89
RALGPS1-206ENST00000394011 CHD4Q14839 1912 aa26.83■■□□□ 1.89
RALGPS1-206ENST00000394011 AMIGO3Q86WK7 504 aa26.83■■□□□ 1.89
RALGPS1-206ENST00000394011 KIF7Q2M1P5 1343 aa26.83■■□□□ 1.89
RALGPS1-206ENST00000394011 IFNL2Q8IZJ0 200 aa26.82■■□□□ 1.88
RALGPS1-206ENST00000394011 SMARCC1Q92922 1105 aaPredicted RBP26.82■■□□□ 1.88
RALGPS1-206ENST00000394011 POLD1P28340 1107 aa26.81■■□□□ 1.88
RALGPS1-206ENST00000394011 GOLGB1Q14789 3259 aaKnown RBP26.79■■□□□ 1.88
RALGPS1-206ENST00000394011 AMER1Q5JTC6 1135 aaPredicted RBP26.78■■□□□ 1.88
RALGPS1-206ENST00000394011 ASAP1Q9ULH1 1129 aa26.78■■□□□ 1.88
RALGPS1-206ENST00000394011 MORC1Q86VD1 984 aa26.77■■□□□ 1.88
RALGPS1-206ENST00000394011 NLGN2Q8NFZ4 835 aa26.77■■□□□ 1.88
RALGPS1-206ENST00000394011 LOC102724428A0A0B4J2F2 783 aa26.76■■□□□ 1.87
RALGPS1-206ENST00000394011 SIK1P57059 783 aa26.76■■□□□ 1.87
RALGPS1-206ENST00000394011 LINC00116Q8NCU8 138 aa26.76■■□□□ 1.87
RALGPS1-206ENST00000394011 TMOD3Q9NYL9 352 aa26.76■■□□□ 1.87
RALGPS1-206ENST00000394011 MSH5O43196 834 aa26.75■■□□□ 1.87
RALGPS1-206ENST00000394011 ITPK1Q13572 414 aa26.75■■□□□ 1.87
RALGPS1-206ENST00000394011 MSL1Q68DK7 614 aa26.75■■□□□ 1.87
RALGPS1-206ENST00000394011 SMIM5Q71RC9 77 aa26.75■■□□□ 1.87
RALGPS1-206ENST00000394011 ATG3Q9NT62 314 aa26.75■■□□□ 1.87
RALGPS1-206ENST00000394011 KDM6AO15550 1401 aaPredicted RBP26.74■■□□□ 1.87
RALGPS1-206ENST00000394011 ZNF831Q5JPB2 1677 aa26.74■■□□□ 1.87
RALGPS1-206ENST00000394011 AEBP1Q8IUX7 1158 aa26.74■■□□□ 1.87
RALGPS1-206ENST00000394011 KNSTRNQ9Y448 316 aa26.74■■□□□ 1.87
RALGPS1-206ENST00000394011 KDRP35968 1356 aa26.73■■□□□ 1.87
RALGPS1-206ENST00000394011 HMGB2P26583 209 aaKnown RBP26.73■■□□□ 1.87
RALGPS1-206ENST00000394011 FLAD1Q8NFF5 587 aa26.73■■□□□ 1.87
RALGPS1-206ENST00000394011 PER1O15534 1290 aaPredicted RBP26.72■■□□□ 1.87
RALGPS1-206ENST00000394011 KLHL34Q8N239 644 aa26.72■■□□□ 1.87
RALGPS1-206ENST00000394011 IL13P35225 146 aa26.71■■□□□ 1.87
RALGPS1-206ENST00000394011 AK7Q96M32 723 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms