RNA–Protein interactions for RNA: ENST00000393988.2

KRT41P-201, Transcript of keratin 41 pseudogene, humanhuman

BASIC

Gene KRT41P, Length 1,293 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT41P-201ENST00000393988 ZNF827Q17R98 1081 aa16.64■□□□□ 0.25
KRT41P-201ENST00000393988 RAPGEF4Q8WZA2 1011 aa16.64■□□□□ 0.25
KRT41P-201ENST00000393988 MEGF6O75095 1541 aa16.64■□□□□ 0.25
KRT41P-201ENST00000393988 SMG6Q86US8 1419 aaKnown RBP16.63■□□□□ 0.25
KRT41P-201ENST00000393988 NSD3Q9BZ95 1437 aa16.63■□□□□ 0.25
KRT41P-201ENST00000393988 PTGER2P43116 358 aa16.63■□□□□ 0.25
KRT41P-201ENST00000393988 TIMELESSQ9UNS1 1208 aa16.63■□□□□ 0.25
KRT41P-201ENST00000393988 TATP17735 454 aaPredicted RBP16.62■□□□□ 0.25
KRT41P-201ENST00000393988 YY1P25490 414 aa16.62■□□□□ 0.25
KRT41P-201ENST00000393988 MTFR1LQ9H019 292 aa16.62■□□□□ 0.25
KRT41P-201ENST00000393988 EMILIN1Q9Y6C2 1016 aa16.62■□□□□ 0.25
KRT41P-201ENST00000393988 MYOM1P52179 1685 aa16.61■□□□□ 0.25
KRT41P-201ENST00000393988 DOT1LQ8TEK3 1739 aa16.61■□□□□ 0.25
KRT41P-201ENST00000393988 SLC27A3Q5K4L6 730 aa16.6■□□□□ 0.25
KRT41P-201ENST00000393988 INSRP06213 1382 aa16.6■□□□□ 0.25
KRT41P-201ENST00000393988 FLT4P35916 1363 aa16.6■□□□□ 0.25
KRT41P-201ENST00000393988 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
KRT41P-201ENST00000393988 FHDC1Q9C0D6 1143 aaPredicted RBP16.59■□□□□ 0.25
KRT41P-201ENST00000393988 TFCP2L1Q9NZI6 479 aa16.59■□□□□ 0.25
KRT41P-201ENST00000393988 SHANK3Q9BYB0 1731 aa16.59■□□□□ 0.25
KRT41P-201ENST00000393988 TNNT2P45379 298 aaPredicted RBP16.58■□□□□ 0.24
KRT41P-201ENST00000393988 AKT1S1Q96B36 256 aa16.58■□□□□ 0.24
KRT41P-201ENST00000393988 CLSPNQ9HAW4 1339 aa16.58■□□□□ 0.24
KRT41P-201ENST00000393988 PAPPAQ13219 1627 aa16.58■□□□□ 0.24
KRT41P-201ENST00000393988 CGNL1Q0VF96 1302 aa16.57■□□□□ 0.24
KRT41P-201ENST00000393988 MSH5O43196 834 aa16.57■□□□□ 0.24
KRT41P-201ENST00000393988 KLHL34Q8N239 644 aa16.57■□□□□ 0.24
KRT41P-201ENST00000393988 ARXQ96QS3 562 aa16.57■□□□□ 0.24
KRT41P-201ENST00000393988 SYT17Q9BSW7 474 aa16.57■□□□□ 0.24
KRT41P-201ENST00000393988 CCNL1Q9UK58 526 aaPredicted RBP16.57■□□□□ 0.24
KRT41P-201ENST00000393988 NSD2O96028 1365 aa16.56■□□□□ 0.24
KRT41P-201ENST00000393988 HSPA5P11021 654 aaKnown RBP16.55■□□□□ 0.24
KRT41P-201ENST00000393988 MPRIPQ6WCQ1 1025 aa16.55■□□□□ 0.24
KRT41P-201ENST00000393988 SGIP1Q9BQI5 828 aa16.55■□□□□ 0.24
KRT41P-201ENST00000393988 PNPLA7Q6ZV29 1317 aa16.54■□□□□ 0.24
KRT41P-201ENST00000393988 PCDH11XQ9BZA7 1347 aa16.54■□□□□ 0.24
KRT41P-201ENST00000393988 PCDH11YQ9BZA8 1340 aa16.54■□□□□ 0.24
KRT41P-201ENST00000393988 EIF4G2P78344 907 aaKnown RBP eCLIP16.54■□□□□ 0.24
KRT41P-201ENST00000393988 KIF24Q5T7B8 1368 aa16.53■□□□□ 0.24
KRT41P-201ENST00000393988 CYP27B1O15528 508 aa16.53■□□□□ 0.24
KRT41P-201ENST00000393988 MAP2P11137 1827 aaKnown RBP16.53■□□□□ 0.24
KRT41P-201ENST00000393988 POLD1P28340 1107 aa16.52■□□□□ 0.24
KRT41P-201ENST00000393988 LY75O60449 1722 aa16.51■□□□□ 0.23
KRT41P-201ENST00000393988 SLC16A10Q8TF71 515 aa16.51■□□□□ 0.23
KRT41P-201ENST00000393988 EYA1Q99502 592 aa16.51■□□□□ 0.23
KRT41P-201ENST00000393988 PANK3Q9H999 370 aa16.51■□□□□ 0.23
KRT41P-201ENST00000393988 POLKQ9UBT6 870 aa16.51■□□□□ 0.23
KRT41P-201ENST00000393988 WASHC2AQ641Q2 1341 aa16.5■□□□□ 0.23
KRT41P-201ENST00000393988 TUBGCP6Q96RT7 1819 aa16.5■□□□□ 0.23
KRT41P-201ENST00000393988 SPG7Q9UQ90 795 aa16.5■□□□□ 0.23
KRT41P-201ENST00000393988 PELP1Q8IZL8 1130 aaKnown RBP16.49■□□□□ 0.23
KRT41P-201ENST00000393988 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
KRT41P-201ENST00000393988 COL23A1Q86Y22 540 aaPredicted RBP16.48■□□□□ 0.23
KRT41P-201ENST00000393988 PALLDQ8WX93 1383 aa16.48■□□□□ 0.23
KRT41P-201ENST00000393988 EIF4A2Q14240 407 aaKnown RBP16.47■□□□□ 0.23
KRT41P-201ENST00000393988 GPR162Q16538 588 aa16.47■□□□□ 0.23
KRT41P-201ENST00000393988 PIGBQ92521 554 aa16.47■□□□□ 0.23
KRT41P-201ENST00000393988 QSER1Q2KHR3 1735 aa16.47■□□□□ 0.23
KRT41P-201ENST00000393988 ITGB4P16144 1822 aa16.46■□□□□ 0.23
KRT41P-201ENST00000393988 SMARCC1Q92922 1105 aaPredicted RBP16.45■□□□□ 0.22
KRT41P-201ENST00000393988 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
KRT41P-201ENST00000393988 ANKRD26Q9UPS8 1709 aa16.45■□□□□ 0.22
KRT41P-201ENST00000393988 TOGARAM1Q9Y4F4 1720 aa16.45■□□□□ 0.22
KRT41P-201ENST00000393988 SMIM5Q71RC9 77 aa16.44■□□□□ 0.22
KRT41P-201ENST00000393988 MORC1Q86VD1 984 aa16.44■□□□□ 0.22
KRT41P-201ENST00000393988 TMOD3Q9NYL9 352 aa16.44■□□□□ 0.22
KRT41P-201ENST00000393988 C5P01031 1676 aa16.43■□□□□ 0.22
KRT41P-201ENST00000393988 NKX1-1Q15270 411 aaPredicted RBP16.43■□□□□ 0.22
KRT41P-201ENST00000393988 IFNL2Q8IZJ0 200 aa16.43■□□□□ 0.22
KRT41P-201ENST00000393988 NLGN2Q8NFZ4 835 aa16.43■□□□□ 0.22
KRT41P-201ENST00000393988 AK7Q96M32 723 aa16.43■□□□□ 0.22
KRT41P-201ENST00000393988 MAP3K5Q99683 1374 aa16.42■□□□□ 0.22
KRT41P-201ENST00000393988 PHF14O94880 888 aa16.42■□□□□ 0.22
KRT41P-201ENST00000393988 PHKG2P15735 406 aa16.42■□□□□ 0.22
KRT41P-201ENST00000393988 NCAPD2Q15021 1401 aa16.42■□□□□ 0.22
KRT41P-201ENST00000393988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.41■□□□□ 0.22
KRT41P-201ENST00000393988 ASAP1Q9ULH1 1129 aa16.41■□□□□ 0.22
KRT41P-201ENST00000393988 TAF1LQ8IZX4 1826 aa16.4■□□□□ 0.22
KRT41P-201ENST00000393988 KNSTRNQ9Y448 316 aa16.4■□□□□ 0.22
KRT41P-201ENST00000393988 LOC102724428A0A0B4J2F2 783 aa16.39■□□□□ 0.21
KRT41P-201ENST00000393988 HMGB2P26583 209 aaKnown RBP16.39■□□□□ 0.21
KRT41P-201ENST00000393988 SIK1P57059 783 aa16.39■□□□□ 0.21
KRT41P-201ENST00000393988 AMIGO3Q86WK7 504 aa16.39■□□□□ 0.21
KRT41P-201ENST00000393988 ZNF784Q8NCA9 323 aaPredicted RBP16.39■□□□□ 0.21
KRT41P-201ENST00000393988 FLAD1Q8NFF5 587 aa16.39■□□□□ 0.21
KRT41P-201ENST00000393988 COL24A1Q17RW2 1714 aa16.39■□□□□ 0.21
KRT41P-201ENST00000393988 ATP6V1AP38606 617 aa16.38■□□□□ 0.21
KRT41P-201ENST00000393988 PLEKHO1Q53GL0 409 aaPredicted RBP16.38■□□□□ 0.21
KRT41P-201ENST00000393988 LINC00116Q8NCU8 138 aa16.38■□□□□ 0.21
KRT41P-201ENST00000393988 CHD4Q14839 1912 aa16.38■□□□□ 0.21
KRT41P-201ENST00000393988 C4BP0C0L5 1744 aa16.38■□□□□ 0.21
KRT41P-201ENST00000393988 IGSF1Q8N6C5 1336 aa16.38■□□□□ 0.21
KRT41P-201ENST00000393988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.37■□□□□ 0.21
KRT41P-201ENST00000393988 ZNF530Q6P9A1 599 aaPredicted RBP16.37■□□□□ 0.21
KRT41P-201ENST00000393988 AEBP1Q8IUX7 1158 aa16.37■□□□□ 0.21
KRT41P-201ENST00000393988 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
KRT41P-201ENST00000393988 ITPK1Q13572 414 aa16.36■□□□□ 0.21
KRT41P-201ENST00000393988 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
KRT41P-201ENST00000393988 GNPATO15228 680 aa16.35■□□□□ 0.21
KRT41P-201ENST00000393988 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms