RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 NLGN2Q8NFZ4 835 aa28.17■■■□□ 2.1
POLR2J-202ENST00000393794 TFCP2L1Q9NZI6 479 aa28.17■■■□□ 2.1
POLR2J-202ENST00000393794 DOT1LQ8TEK3 1739 aa28.17■■■□□ 2.1
POLR2J-202ENST00000393794 MAP3K19Q56UN5 1328 aa28.17■■■□□ 2.1
POLR2J-202ENST00000393794 HOXC9P31274 260 aa28.16■■■□□ 2.1
POLR2J-202ENST00000393794 RGPD2P0DJD1 1756 aa28.14■■■□□ 2.1
POLR2J-202ENST00000393794 LTV1Q96GA3 475 aaPredicted RBP28.14■■■□□ 2.1
POLR2J-202ENST00000393794 MEGF6O75095 1541 aa28.13■■■□□ 2.09
POLR2J-202ENST00000393794 ZCRB1Q8TBF4 217 aaKnown RBP28.13■■■□□ 2.09
POLR2J-202ENST00000393794 TESK2Q96S53 571 aa28.13■■■□□ 2.09
POLR2J-202ENST00000393794 FBLN1P23142 703 aa28.11■■■□□ 2.09
POLR2J-202ENST00000393794 YBX3P16989 372 aaKnown RBP eCLIP28.1■■■□□ 2.094e-21■■■■□ 22.1
POLR2J-202ENST00000393794 COL23A1Q86Y22 540 aaPredicted RBP28.1■■■□□ 2.09
POLR2J-202ENST00000393794 SYTL4Q96C24 671 aaPredicted RBP28.1■■■□□ 2.09
POLR2J-202ENST00000393794 GIGYF1O75420 1035 aaPredicted RBP28.09■■■□□ 2.09
POLR2J-202ENST00000393794 KLHL34Q8N239 644 aa28.08■■■□□ 2.09
POLR2J-202ENST00000393794 COG3Q96JB2 828 aa28.08■■■□□ 2.09
POLR2J-202ENST00000393794 CCNL1Q9UK58 526 aaPredicted RBP28.08■■■□□ 2.09
POLR2J-202ENST00000393794 GRIN3BO60391 1043 aa28.06■■■□□ 2.08
POLR2J-202ENST00000393794 NBPF6Q5VWK0 638 aa28.06■■■□□ 2.08
POLR2J-202ENST00000393794 NBPF4Q96M43 638 aa28.06■■■□□ 2.08
POLR2J-202ENST00000393794 CGNL1Q0VF96 1302 aa28.06■■■□□ 2.08
POLR2J-202ENST00000393794 RTL1A6NKG5 1358 aa28.06■■■□□ 2.08
POLR2J-202ENST00000393794 AMPHP49418 695 aa28.05■■■□□ 2.08
POLR2J-202ENST00000393794 USP47Q96K76 1375 aa28.02■■■□□ 2.08
POLR2J-202ENST00000393794 PELP1Q8IZL8 1130 aaKnown RBP28.02■■■□□ 2.08
POLR2J-202ENST00000393794 TAF1LQ8IZX4 1826 aa28■■■□□ 2.07
POLR2J-202ENST00000393794 ST20-MTHFSA0A0A6YYL1 179 aa28■■■□□ 2.07
POLR2J-202ENST00000393794 FYB1O15117 783 aa27.99■■■□□ 2.07
POLR2J-202ENST00000393794 CD2APQ9Y5K6 639 aa27.99■■■□□ 2.07
POLR2J-202ENST00000393794 C5P01031 1676 aa27.99■■■□□ 2.07
POLR2J-202ENST00000393794 SLC24A1O60721 1099 aa27.97■■■□□ 2.07
POLR2J-202ENST00000393794 RRS1Q15050 365 aaKnown RBP27.97■■■□□ 2.07
POLR2J-202ENST00000393794 USHBP1Q8N6Y0 703 aa27.95■■■□□ 2.06
POLR2J-202ENST00000393794 FLAD1Q8NFF5 587 aa27.95■■■□□ 2.06
POLR2J-202ENST00000393794 MSL1Q68DK7 614 aa27.94■■■□□ 2.06
POLR2J-202ENST00000393794 ADCY9O60503 1353 aa27.94■■■□□ 2.06
POLR2J-202ENST00000393794 INSRP06213 1382 aa27.94■■■□□ 2.06
POLR2J-202ENST00000393794 ATP10DQ9P241 1426 aa27.93■■■□□ 2.06
POLR2J-202ENST00000393794 HMGB2P26583 209 aaKnown RBP27.93■■■□□ 2.06
POLR2J-202ENST00000393794 IFFO2Q5TF58 517 aa27.93■■■□□ 2.06
POLR2J-202ENST00000393794 RAPGEF4Q8WZA2 1011 aa27.93■■■□□ 2.06
POLR2J-202ENST00000393794 CYP27B1O15528 508 aa27.92■■■□□ 2.06
POLR2J-202ENST00000393794 MSH5O43196 834 aa27.92■■■□□ 2.06
POLR2J-202ENST00000393794 KIF24Q5T7B8 1368 aa27.91■■■□□ 2.06
POLR2J-202ENST00000393794 PALLDQ8WX93 1383 aa27.91■■■□□ 2.06
POLR2J-202ENST00000393794 TONSLQ96HA7 1378 aa27.91■■■□□ 2.06
POLR2J-202ENST00000393794 TATP17735 454 aaPredicted RBP27.91■■■□□ 2.06
POLR2J-202ENST00000393794 HSP90AB2PQ58FF8 381 aa27.91■■■□□ 2.06
POLR2J-202ENST00000393794 AMIGO3Q86WK7 504 aa27.91■■■□□ 2.06
POLR2J-202ENST00000393794 GGNBP2Q9H3C7 697 aa27.91■■■□□ 2.06
POLR2J-202ENST00000393794 TOGARAM1Q9Y4F4 1720 aa27.91■■■□□ 2.06
POLR2J-202ENST00000393794 PCDH11XQ9BZA7 1347 aa27.91■■■□□ 2.06
POLR2J-202ENST00000393794 PCDH11YQ9BZA8 1340 aa27.91■■■□□ 2.06
POLR2J-202ENST00000393794 ITGB4P16144 1822 aa27.9■■■□□ 2.06
POLR2J-202ENST00000393794 NCAPD2Q15021 1401 aa27.89■■■□□ 2.06
POLR2J-202ENST00000393794 C4BP0C0L5 1744 aa27.89■■■□□ 2.05
POLR2J-202ENST00000393794 UBR3Q6ZT12 1888 aa27.88■■■□□ 2.05
POLR2J-202ENST00000393794 SMG6Q86US8 1419 aaKnown RBP27.88■■■□□ 2.05
POLR2J-202ENST00000393794 MAP2P11137 1827 aaKnown RBP27.87■■■□□ 2.05
POLR2J-202ENST00000393794 FLT4P35916 1363 aa27.86■■■□□ 2.05
POLR2J-202ENST00000393794 NKX1-1Q15270 411 aaPredicted RBP27.86■■■□□ 2.05
POLR2J-202ENST00000393794 PKD1L3Q7Z443 1732 aa27.86■■■□□ 2.05
POLR2J-202ENST00000393794 MPRIPQ6WCQ1 1025 aa27.85■■■□□ 2.05
POLR2J-202ENST00000393794 SMARCC1Q92922 1105 aaPredicted RBP27.84■■■□□ 2.05
POLR2J-202ENST00000393794 PIGBQ92521 554 aa27.82■■■□□ 2.04
POLR2J-202ENST00000393794 GPBP1L1Q9HC44 474 aaPredicted RBP27.8■■■□□ 2.04
POLR2J-202ENST00000393794 KIF20BQ96Q89 1820 aa27.8■■■□□ 2.04
POLR2J-202ENST00000393794 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.78■■■□□ 2.04
POLR2J-202ENST00000393794 HSPA6P17066 643 aa27.78■■■□□ 2.04
POLR2J-202ENST00000393794 TMF1P82094 1093 aa27.78■■■□□ 2.04
POLR2J-202ENST00000393794 SMIM5Q71RC9 77 aa27.78■■■□□ 2.04
POLR2J-202ENST00000393794 AK7Q96M32 723 aa27.78■■■□□ 2.04
POLR2J-202ENST00000393794 CARD14Q9BXL6 1004 aa27.78■■■□□ 2.04
POLR2J-202ENST00000393794 IGSF1Q8N6C5 1336 aa27.77■■■□□ 2.04
POLR2J-202ENST00000393794 SSFA2P28290 1259 aa27.77■■■□□ 2.04
POLR2J-202ENST00000393794 NSD3Q9BZ95 1437 aa27.76■■■□□ 2.04
POLR2J-202ENST00000393794 LINC00116Q8NCU8 138 aa27.75■■■□□ 2.03
POLR2J-202ENST00000393794 EMILIN1Q9Y6C2 1016 aa27.75■■■□□ 2.03
POLR2J-202ENST00000393794 ANKRD26Q9UPS8 1709 aa27.75■■■□□ 2.03
POLR2J-202ENST00000393794 LOC102724428A0A0B4J2F2 783 aa27.74■■■□□ 2.03
POLR2J-202ENST00000393794 SIK1P57059 783 aa27.74■■■□□ 2.03
POLR2J-202ENST00000393794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.74■■■□□ 2.03
POLR2J-202ENST00000393794 CICQ96RK0 1608 aaPredicted RBP27.74■■■□□ 2.03
POLR2J-202ENST00000393794 KIF3CO14782 793 aa27.72■■■□□ 2.03
POLR2J-202ENST00000393794 WASHC2AQ641Q2 1341 aa27.71■■■□□ 2.03
POLR2J-202ENST00000393794 PHF14O94880 888 aa27.71■■■□□ 2.03
POLR2J-202ENST00000393794 ITPK1Q13572 414 aa27.71■■■□□ 2.03
POLR2J-202ENST00000393794 KIF13BQ9NQT8 1826 aa27.71■■■□□ 2.03
POLR2J-202ENST00000393794 ASAP1Q9ULH1 1129 aa27.69■■■□□ 2.02
POLR2J-202ENST00000393794 SPG7Q9UQ90 795 aa27.69■■■□□ 2.02
POLR2J-202ENST00000393794 KIAA1551Q9HCM1 1747 aa27.69■■■□□ 2.02
POLR2J-202ENST00000393794 EYA1Q99502 592 aa27.68■■■□□ 2.02
POLR2J-202ENST00000393794 CDCA8Q53HL2 280 aa27.67■■■□□ 2.02
POLR2J-202ENST00000393794 ZNF526Q8TF50 670 aaPredicted RBP27.67■■■□□ 2.02
POLR2J-202ENST00000393794 PHKG2P15735 406 aa27.65■■■□□ 2.02
POLR2J-202ENST00000393794 ATG3Q9NT62 314 aa27.65■■■□□ 2.02
POLR2J-202ENST00000393794 PXDNLA1KZ92 1463 aa27.64■■■□□ 2.02
POLR2J-202ENST00000393794 TMOD3Q9NYL9 352 aa27.64■■■□□ 2.02
POLR2J-202ENST00000393794 WWC3Q9ULE0 1092 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms