RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 MEGF6O75095 1541 aa26.03■■□□□ 1.76
SNCB-202ENST00000393693 FYB1O15117 783 aa26.02■■□□□ 1.76
SNCB-202ENST00000393693 NBPF6Q5VWK0 638 aa26.02■■□□□ 1.76
SNCB-202ENST00000393693 NBPF4Q96M43 638 aa26.02■■□□□ 1.76
SNCB-202ENST00000393693 SLC24A1O60721 1099 aa26.01■■□□□ 1.75
SNCB-202ENST00000393693 RGPD2P0DJD1 1756 aa26.01■■□□□ 1.75
SNCB-202ENST00000393693 USHBP1Q8N6Y0 703 aa26.01■■□□□ 1.75
SNCB-202ENST00000393693 UTRNP46939 3433 aa26.01■■□□□ 1.75
SNCB-202ENST00000393693 NSD2O96028 1365 aa26■■□□□ 1.75
SNCB-202ENST00000393693 PNPLA7Q6ZV29 1317 aa26■■□□□ 1.75
SNCB-202ENST00000393693 TMF1P82094 1093 aa25.98■■□□□ 1.75
SNCB-202ENST00000393693 ZNF784Q8NCA9 323 aaPredicted RBP25.98■■□□□ 1.75
SNCB-202ENST00000393693 TFCP2L1Q9NZI6 479 aa25.98■■□□□ 1.75
SNCB-202ENST00000393693 DOT1LQ8TEK3 1739 aa25.97■■□□□ 1.75
SNCB-202ENST00000393693 KLHL34Q8N239 644 aa25.97■■□□□ 1.75
SNCB-202ENST00000393693 SLC16A10Q8TF71 515 aa25.97■■□□□ 1.75
SNCB-202ENST00000393693 TIMELESSQ9UNS1 1208 aa25.97■■□□□ 1.75
SNCB-202ENST00000393693 SHANK3Q9BYB0 1731 aa25.97■■□□□ 1.75
SNCB-202ENST00000393693 RTL1A6NKG5 1358 aa25.96■■□□□ 1.75
SNCB-202ENST00000393693 MAP3K5Q99683 1374 aa25.96■■□□□ 1.75
SNCB-202ENST00000393693 USP47Q96K76 1375 aa25.95■■□□□ 1.75
SNCB-202ENST00000393693 HSP90AB2PQ58FF8 381 aa25.94■■□□□ 1.74
SNCB-202ENST00000393693 POLD1P28340 1107 aa25.93■■□□□ 1.74
SNCB-202ENST00000393693 CCNL1Q9UK58 526 aaPredicted RBP25.93■■□□□ 1.74
SNCB-202ENST00000393693 RAPGEF4Q8WZA2 1011 aa25.92■■□□□ 1.74
SNCB-202ENST00000393693 GPR162Q16538 588 aa25.91■■□□□ 1.74
SNCB-202ENST00000393693 LY75O60449 1722 aa25.91■■□□□ 1.74
SNCB-202ENST00000393693 TATP17735 454 aaPredicted RBP25.9■■□□□ 1.74
SNCB-202ENST00000393693 QSER1Q2KHR3 1735 aa25.9■■□□□ 1.74
SNCB-202ENST00000393693 TUBGCP6Q96RT7 1819 aa25.9■■□□□ 1.74
SNCB-202ENST00000393693 SMG6Q86US8 1419 aaKnown RBP25.89■■□□□ 1.74
SNCB-202ENST00000393693 CGNL1Q0VF96 1302 aa25.88■■□□□ 1.73
SNCB-202ENST00000393693 INSRP06213 1382 aa25.88■■□□□ 1.73
SNCB-202ENST00000393693 MSH5O43196 834 aa25.87■■□□□ 1.73
SNCB-202ENST00000393693 COL23A1Q86Y22 540 aaPredicted RBP25.87■■□□□ 1.73
SNCB-202ENST00000393693 NLGN2Q8NFZ4 835 aa25.87■■□□□ 1.73
SNCB-202ENST00000393693 CARD14Q9BXL6 1004 aa25.87■■□□□ 1.73
SNCB-202ENST00000393693 PELP1Q8IZL8 1130 aaKnown RBP25.86■■□□□ 1.73
SNCB-202ENST00000393693 COL24A1Q17RW2 1714 aa25.85■■□□□ 1.73
SNCB-202ENST00000393693 FLT4P35916 1363 aa25.85■■□□□ 1.73
SNCB-202ENST00000393693 EMILIN1Q9Y6C2 1016 aa25.85■■□□□ 1.73
SNCB-202ENST00000393693 CDCA8Q53HL2 280 aa25.84■■□□□ 1.73
SNCB-202ENST00000393693 PCDH11XQ9BZA7 1347 aa25.83■■□□□ 1.73
SNCB-202ENST00000393693 PCDH11YQ9BZA8 1340 aa25.83■■□□□ 1.73
SNCB-202ENST00000393693 KIF20BQ96Q89 1820 aa25.82■■□□□ 1.72
SNCB-202ENST00000393693 CYP27B1O15528 508 aa25.82■■□□□ 1.72
SNCB-202ENST00000393693 MSL1Q68DK7 614 aa25.82■■□□□ 1.72
SNCB-202ENST00000393693 MPRIPQ6WCQ1 1025 aa25.82■■□□□ 1.72
SNCB-202ENST00000393693 CHD4Q14839 1912 aa25.82■■□□□ 1.72
SNCB-202ENST00000393693 NSD3Q9BZ95 1437 aa25.8■■□□□ 1.72
SNCB-202ENST00000393693 KIF24Q5T7B8 1368 aa25.8■■□□□ 1.72
SNCB-202ENST00000393693 PPM1GO15355 546 aaPredicted RBP25.79■■□□□ 1.72
SNCB-202ENST00000393693 PALLDQ8WX93 1383 aa25.79■■□□□ 1.72
SNCB-202ENST00000393693 YBX3P16989 372 aaKnown RBP eCLIP25.75■■□□□ 1.71
SNCB-202ENST00000393693 C5P01031 1676 aa25.74■■□□□ 1.71
SNCB-202ENST00000393693 C1QTNF8P60827 252 aa25.73■■□□□ 1.71
SNCB-202ENST00000393693 SMIM5Q71RC9 77 aa25.73■■□□□ 1.71
SNCB-202ENST00000393693 AMIGO3Q86WK7 504 aa25.73■■□□□ 1.71
SNCB-202ENST00000393693 PIGBQ92521 554 aa25.73■■□□□ 1.71
SNCB-202ENST00000393693 GOLGB1Q14789 3259 aaKnown RBP25.73■■□□□ 1.71
SNCB-202ENST00000393693 TOGARAM1Q9Y4F4 1720 aa25.73■■□□□ 1.71
SNCB-202ENST00000393693 EYA1Q99502 592 aa25.71■■□□□ 1.71
SNCB-202ENST00000393693 NCAPD2Q15021 1401 aa25.71■■□□□ 1.71
SNCB-202ENST00000393693 WASHC2AQ641Q2 1341 aa25.7■■□□□ 1.71
SNCB-202ENST00000393693 NKX1-1Q15270 411 aaPredicted RBP25.7■■□□□ 1.7
SNCB-202ENST00000393693 FLAD1Q8NFF5 587 aa25.7■■□□□ 1.7
SNCB-202ENST00000393693 SMARCC1Q92922 1105 aaPredicted RBP25.7■■□□□ 1.7
SNCB-202ENST00000393693 SENP3-EIF4A1A0A087X0R7 540 aa25.69■■□□□ 1.7
SNCB-202ENST00000393693 POLR3GLQ9BT43 218 aa25.69■■□□□ 1.7
SNCB-202ENST00000393693 SPG7Q9UQ90 795 aa25.69■■□□□ 1.7
SNCB-202ENST00000393693 PKD1L3Q7Z443 1732 aa25.68■■□□□ 1.7
SNCB-202ENST00000393693 TAF1LQ8IZX4 1826 aa25.68■■□□□ 1.7
SNCB-202ENST00000393693 AK7Q96M32 723 aa25.68■■□□□ 1.7
SNCB-202ENST00000393693 POLKQ9UBT6 870 aa25.68■■□□□ 1.7
SNCB-202ENST00000393693 ITGB4P16144 1822 aa25.67■■□□□ 1.7
SNCB-202ENST00000393693 GRIN3BO60391 1043 aa25.67■■□□□ 1.7
SNCB-202ENST00000393693 PHF14O94880 888 aa25.67■■□□□ 1.7
SNCB-202ENST00000393693 C4BP0C0L5 1744 aa25.66■■□□□ 1.7
SNCB-202ENST00000393693 TNNT2P45379 298 aaPredicted RBP25.65■■□□□ 1.7
SNCB-202ENST00000393693 CD2APQ9Y5K6 639 aa25.65■■□□□ 1.7
SNCB-202ENST00000393693 GIGYF1O75420 1035 aaPredicted RBP25.64■■□□□ 1.7
SNCB-202ENST00000393693 HMGB2P26583 209 aaKnown RBP25.64■■□□□ 1.7
SNCB-202ENST00000393693 LINC00116Q8NCU8 138 aa25.64■■□□□ 1.7
SNCB-202ENST00000393693 ANKRD26Q9UPS8 1709 aa25.63■■□□□ 1.69
SNCB-202ENST00000393693 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.63■■□□□ 1.69
SNCB-202ENST00000393693 LOC102724428A0A0B4J2F2 783 aa25.63■■□□□ 1.69
SNCB-202ENST00000393693 SIK1P57059 783 aa25.63■■□□□ 1.69
SNCB-202ENST00000393693 TMOD3Q9NYL9 352 aa25.63■■□□□ 1.69
SNCB-202ENST00000393693 ASAP1Q9ULH1 1129 aa25.63■■□□□ 1.69
SNCB-202ENST00000393693 PHKG2P15735 406 aa25.62■■□□□ 1.69
SNCB-202ENST00000393693 EIF4A2Q14240 407 aaKnown RBP25.62■■□□□ 1.69
SNCB-202ENST00000393693 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.62■■□□□ 1.69
SNCB-202ENST00000393693 MAP2P11137 1827 aaKnown RBP25.62■■□□□ 1.69
SNCB-202ENST00000393693 ITPK1Q13572 414 aa25.61■■□□□ 1.69
SNCB-202ENST00000393693 IFNL2Q8IZJ0 200 aa25.61■■□□□ 1.69
SNCB-202ENST00000393693 WWC3Q9ULE0 1092 aa25.6■■□□□ 1.69
SNCB-202ENST00000393693 UBR3Q6ZT12 1888 aa25.58■■□□□ 1.69
SNCB-202ENST00000393693 ATP6V1AP38606 617 aa25.58■■□□□ 1.69
SNCB-202ENST00000393693 ATG3Q9NT62 314 aa25.58■■□□□ 1.69
SNCB-202ENST00000393693 SSFA2P28290 1259 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms