RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 NWD1Q149M9 1564 aa18.05■□□□□ 0.48
MKS1-203ENST00000393120 INTS3Q68E01 1043 aaKnown RBP18.04■□□□□ 0.48
MKS1-203ENST00000393120 GCC1Q96CN9 775 aa18.04■□□□□ 0.48
MKS1-203ENST00000393120 FOXO3O43524 673 aa18.04■□□□□ 0.48
MKS1-203ENST00000393120 PTPRCP08575 1304 aa18.03■□□□□ 0.48
MKS1-203ENST00000393120 NUTM2GQ5VZR2 741 aa18.03■□□□□ 0.48
MKS1-203ENST00000393120 SEC24BO95487 1268 aa18.02■□□□□ 0.48
MKS1-203ENST00000393120 PSME1Q06323 249 aa18.02■□□□□ 0.48
MKS1-203ENST00000393120 KCNH5Q8NCM2 988 aa18.02■□□□□ 0.48
MKS1-203ENST00000393120 IP6K1Q92551 441 aa18.02■□□□□ 0.48
MKS1-203ENST00000393120 BABAM1Q9NWV8 329 aa18.02■□□□□ 0.48
MKS1-203ENST00000393120 ESCO1Q5FWF5 840 aa18.01■□□□□ 0.47
MKS1-203ENST00000393120 RGS12O14924 1447 aa18■□□□□ 0.47
MKS1-203ENST00000393120 NFAT5O94916 1531 aa18■□□□□ 0.47
MKS1-203ENST00000393120 GNAT3A8MTJ3 354 aa18■□□□□ 0.47
MKS1-203ENST00000393120 KRT24Q2M2I5 525 aa18■□□□□ 0.47
MKS1-203ENST00000393120 CHD1LQ86WJ1 897 aa18■□□□□ 0.47
MKS1-203ENST00000393120 TSPYL4Q9UJ04 414 aa18■□□□□ 0.47
MKS1-203ENST00000393120 SOS1Q07889 1333 aaPredicted RBP18■□□□□ 0.47
MKS1-203ENST00000393120 UPF2Q9HAU5 1272 aaKnown RBP18■□□□□ 0.47
MKS1-203ENST00000393120 DAXXQ9UER7 740 aaPredicted RBP18■□□□□ 0.47
MKS1-203ENST00000393120 RBM33Q96EV2 1170 aaKnown RBP17.99■□□□□ 0.47
MKS1-203ENST00000393120 SIRT2Q8IXJ6 389 aa17.98■□□□□ 0.47
MKS1-203ENST00000393120 LRRC37A3O60309 1634 aa17.98■□□□□ 0.47
MKS1-203ENST00000393120 C14orf37Q86TY3 774 aa17.98■□□□□ 0.47
MKS1-203ENST00000393120 MAP3K5Q99683 1374 aa17.97■□□□□ 0.47
MKS1-203ENST00000393120 TBC1D32Q96NH3 1257 aa17.97■□□□□ 0.47
MKS1-203ENST00000393120 PHRF1Q9P1Y6 1649 aaKnown RBP17.97■□□□□ 0.47
MKS1-203ENST00000393120 MIS18AQ9NYP9 233 aa17.96■□□□□ 0.47
MKS1-203ENST00000393120 USP35Q9P2H5 1018 aa17.96■□□□□ 0.47
MKS1-203ENST00000393120 SLC4A2P04920 1241 aa17.95■□□□□ 0.46
MKS1-203ENST00000393120 IL17REQ8NFR9 667 aa17.95■□□□□ 0.46
MKS1-203ENST00000393120 MSH6P52701 1360 aa17.95■□□□□ 0.46
MKS1-203ENST00000393120 NBR1Q14596 966 aa17.94■□□□□ 0.46
MKS1-203ENST00000393120 RPAP2Q8IXW5 612 aaPredicted RBP17.94■□□□□ 0.46
MKS1-203ENST00000393120 C1orf115Q9H7X2 142 aa17.94■□□□□ 0.46
MKS1-203ENST00000393120 TAF7Q15545 349 aaPredicted RBP17.94■□□□□ 0.46
MKS1-203ENST00000393120 LTV1Q96GA3 475 aaPredicted RBP17.94■□□□□ 0.46
MKS1-203ENST00000393120 ORAI2Q96SN7 254 aa17.94■□□□□ 0.46
MKS1-203ENST00000393120 LNPKQ9C0E8 428 aa17.94■□□□□ 0.46
MKS1-203ENST00000393120 MST1RQ04912 1400 aa17.93■□□□□ 0.46
MKS1-203ENST00000393120 SLIT3O75094 1523 aa17.93■□□□□ 0.46
MKS1-203ENST00000393120 ANKRD45Q5TZF3 282 aa17.93■□□□□ 0.46
MKS1-203ENST00000393120 PROSER2Q86WR7 435 aaPredicted RBP17.93■□□□□ 0.46
MKS1-203ENST00000393120 C19orf44Q9H6X5 657 aa17.93■□□□□ 0.46
MKS1-203ENST00000393120 LTN1O94822 1766 aa17.93■□□□□ 0.46
MKS1-203ENST00000393120 BMP2KLQ5H9B9 411 aa17.92■□□□□ 0.46
MKS1-203ENST00000393120 ANKRD44Q8N8A2 993 aa17.92■□□□□ 0.46
MKS1-203ENST00000393120 DCTPP1Q9H773 170 aa17.92■□□□□ 0.46
MKS1-203ENST00000393120 NBPF6Q5VWK0 638 aa17.92■□□□□ 0.46
MKS1-203ENST00000393120 ARHGEF25Q86VW2 580 aa17.92■□□□□ 0.46
MKS1-203ENST00000393120 NBPF4Q96M43 638 aa17.92■□□□□ 0.46
MKS1-203ENST00000393120 CEMIPQ8WUJ3 1361 aa17.92■□□□□ 0.46
MKS1-203ENST00000393120 GCP02774 474 aa17.91■□□□□ 0.46
MKS1-203ENST00000393120 SLC4A3P48751 1232 aa17.91■□□□□ 0.46
MKS1-203ENST00000393120 CCT4P50991 539 aaKnown RBP17.91■□□□□ 0.46
MKS1-203ENST00000393120 BECN1Q14457 450 aa17.91■□□□□ 0.46
MKS1-203ENST00000393120 CCDC30Q5VVM6 783 aa17.91■□□□□ 0.46
MKS1-203ENST00000393120 STK31Q9BXU1 1019 aa17.9■□□□□ 0.46
MKS1-203ENST00000393120 NCAPD2Q15021 1401 aa17.9■□□□□ 0.46
MKS1-203ENST00000393120 ATP10DQ9P241 1426 aa17.9■□□□□ 0.46
MKS1-203ENST00000393120 RTL5Q5HYW3 569 aaPredicted RBP17.9■□□□□ 0.46
MKS1-203ENST00000393120 C1orf167Q5SNV9 1468 aa17.89■□□□□ 0.45
MKS1-203ENST00000393120 NCOA3Q9Y6Q9 1424 aa17.89■□□□□ 0.45
MKS1-203ENST00000393120 KIF1AQ12756 1690 aa17.88■□□□□ 0.45
MKS1-203ENST00000393120 CEP85Q6P2H3 762 aa17.88■□□□□ 0.45
MKS1-203ENST00000393120 G2E3Q7L622 706 aa17.88■□□□□ 0.45
MKS1-203ENST00000393120 KRT28Q7Z3Y7 464 aa17.88■□□□□ 0.45
MKS1-203ENST00000393120 USHBP1Q8N6Y0 703 aa17.88■□□□□ 0.45
MKS1-203ENST00000393120 TRPM3Q9HCF6 1732 aaPredicted RBP17.86■□□□□ 0.45
MKS1-203ENST00000393120 AMOTQ4VCS5 1084 aa17.86■□□□□ 0.45
MKS1-203ENST00000393120 CHMP4AQ9BY43 222 aa17.86■□□□□ 0.45
MKS1-203ENST00000393120 C22orf23Q9BZE7 217 aa17.86■□□□□ 0.45
MKS1-203ENST00000393120 PLEKHO1Q53GL0 409 aaPredicted RBP17.86■□□□□ 0.45
MKS1-203ENST00000393120 MED1Q15648 1581 aaPredicted RBP17.85■□□□□ 0.45
MKS1-203ENST00000393120 HOXB7P09629 217 aa17.85■□□□□ 0.45
MKS1-203ENST00000393120 AKAP4Q5JQC9 854 aa17.85■□□□□ 0.45
MKS1-203ENST00000393120 MEIS3Q99687 375 aa17.85■□□□□ 0.45
MKS1-203ENST00000393120 DCCP43146 1447 aa17.85■□□□□ 0.45
MKS1-203ENST00000393120 FLIIQ13045 1269 aa17.84■□□□□ 0.45
MKS1-203ENST00000393120 MFAP1P55081 439 aaKnown RBP17.83■□□□□ 0.44
MKS1-203ENST00000393120 XPCQ01831 940 aaPredicted RBP17.83■□□□□ 0.44
MKS1-203ENST00000393120 OVOS2A0A0G2JMS6 1433 aa17.83■□□□□ 0.44
MKS1-203ENST00000393120 HMMRO75330 724 aa17.82■□□□□ 0.44
MKS1-203ENST00000393120 RBM25P49756 843 aaKnown RBP17.82■□□□□ 0.44
MKS1-203ENST00000393120 F6X3S4 739 aa17.82■□□□□ 0.44
MKS1-203ENST00000393120 EIF5BO60841 1220 aaKnown RBP17.82■□□□□ 0.44
MKS1-203ENST00000393120 PLEKHM2Q8IWE5 1019 aa17.82■□□□□ 0.44
MKS1-203ENST00000393120 ANKRD24Q8TF21 1146 aa17.82■□□□□ 0.44
MKS1-203ENST00000393120 LRRC59Q96AG4 307 aaKnown RBP17.82■□□□□ 0.44
MKS1-203ENST00000393120 FAM208AQ9UK61 1670 aaKnown RBP17.81■□□□□ 0.44
MKS1-203ENST00000393120 ATF3P18847 181 aa17.81■□□□□ 0.44
MKS1-203ENST00000393120 LMO7Q8WWI1 1683 aa17.81■□□□□ 0.44
MKS1-203ENST00000393120 PXDNLA1KZ92 1463 aa17.81■□□□□ 0.44
MKS1-203ENST00000393120 LMTK3Q96Q04 1460 aa17.81■□□□□ 0.44
MKS1-203ENST00000393120 CACNA1FO60840 1977 aa17.8■□□□□ 0.44
MKS1-203ENST00000393120 GNAI3P08754 354 aa17.8■□□□□ 0.44
MKS1-203ENST00000393120 EIF4A1P60842 406 aaKnown RBP17.8■□□□□ 0.44
MKS1-203ENST00000393120 SLC4A10Q6U841 1118 aa17.8■□□□□ 0.44
MKS1-203ENST00000393120 LGR6Q9HBX8 967 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms