RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 PIP4K2BP78356 416 aa25.61■■□□□ 1.69
PTPN11-202ENST00000392597 TWISTNBQ3B726 338 aaPredicted RBP25.61■■□□□ 1.69
PTPN11-202ENST00000392597 IP6K1Q92551 441 aa25.61■■□□□ 1.69
PTPN11-202ENST00000392597 BACH2Q9BYV9 841 aa25.61■■□□□ 1.69
PTPN11-202ENST00000392597 TSPYL6Q8N831 410 aa25.6■■□□□ 1.69
PTPN11-202ENST00000392597 SLIT3O75094 1523 aa25.6■■□□□ 1.69
PTPN11-202ENST00000392597 CRB1P82279 1406 aa25.6■■□□□ 1.69
PTPN11-202ENST00000392597 HTATSF1O43719 755 aaKnown RBP25.6■■□□□ 1.69
PTPN11-202ENST00000392597 MRPL50Q8N5N7 158 aaKnown RBP25.6■■□□□ 1.69
PTPN11-202ENST00000392597 AHDC1Q5TGY3 1603 aaPredicted RBP25.59■■□□□ 1.69
PTPN11-202ENST00000392597 MTHFSDQ2M296 383 aaKnown RBP25.59■■□□□ 1.69
PTPN11-202ENST00000392597 PCDHB15Q9Y5E8 787 aa25.59■■□□□ 1.69
PTPN11-202ENST00000392597 KIAA0232Q92628 1395 aa25.59■■□□□ 1.69
PTPN11-202ENST00000392597 PXDNQ92626 1479 aa25.58■■□□□ 1.68
PTPN11-202ENST00000392597 MCM10Q7L590 875 aa25.57■■□□□ 1.68
PTPN11-202ENST00000392597 C8orf58Q8NAV2 365 aa25.57■■□□□ 1.68
PTPN11-202ENST00000392597 RTF1Q92541 710 aaKnown RBP25.57■■□□□ 1.68
PTPN11-202ENST00000392597 RWDD1Q9H446 243 aaPredicted RBP25.57■■□□□ 1.68
PTPN11-202ENST00000392597 DDX17Q92841 729 aaKnown RBP25.56■■□□□ 1.68
PTPN11-202ENST00000392597 SKAP1Q86WV1 359 aa25.55■■□□□ 1.68
PTPN11-202ENST00000392597 ITPRIPQ8IWB1 547 aa25.55■■□□□ 1.68
PTPN11-202ENST00000392597 SOS2Q07890 1332 aaPredicted RBP25.55■■□□□ 1.68
PTPN11-202ENST00000392597 LRRC37A3O60309 1634 aa25.55■■□□□ 1.68
PTPN11-202ENST00000392597 KRT28Q7Z3Y7 464 aa25.55■■□□□ 1.68
PTPN11-202ENST00000392597 USP19O94966 1318 aa25.55■■□□□ 1.68
PTPN11-202ENST00000392597 TMEM57Q8N5G2 664 aa25.54■■□□□ 1.68
PTPN11-202ENST00000392597 XPCQ01831 940 aaPredicted RBP25.53■■□□□ 1.68
PTPN11-202ENST00000392597 CHMP4BQ9H444 224 aaKnown RBP25.53■■□□□ 1.68
PTPN11-202ENST00000392597 ELL2O00472 640 aaPredicted RBP25.51■■□□□ 1.67
PTPN11-202ENST00000392597 ZBTB40Q9NUA8 1239 aa25.51■■□□□ 1.67
PTPN11-202ENST00000392597 ALS2Q96Q42 1657 aa25.5■■□□□ 1.67
PTPN11-202ENST00000392597 GCP02774 474 aa25.5■■□□□ 1.67
PTPN11-202ENST00000392597 ANP32AP39687 249 aaKnown RBP25.5■■□□□ 1.67
PTPN11-202ENST00000392597 PHLPP1O60346 1717 aa25.5■■□□□ 1.67
PTPN11-202ENST00000392597 HDAC1Q13547 482 aaPredicted RBP25.49■■□□□ 1.67
PTPN11-202ENST00000392597 ARHGEF25Q86VW2 580 aa25.49■■□□□ 1.67
PTPN11-202ENST00000392597 ABCC4O15439 1325 aa25.49■■□□□ 1.67
PTPN11-202ENST00000392597 GNAT3A8MTJ3 354 aa25.49■■□□□ 1.67
PTPN11-202ENST00000392597 LTV1Q96GA3 475 aaPredicted RBP25.49■■□□□ 1.67
PTPN11-202ENST00000392597 API5Q9BZZ5 524 aaKnown RBP25.49■■□□□ 1.67
PTPN11-202ENST00000392597 TNS3Q68CZ2 1445 aa25.48■■□□□ 1.67
PTPN11-202ENST00000392597 MAP3K5Q99683 1374 aa25.48■■□□□ 1.67
PTPN11-202ENST00000392597 COL16A1Q07092 1604 aaPredicted RBP25.48■■□□□ 1.67
PTPN11-202ENST00000392597 FAM161AQ3B820 660 aa25.47■■□□□ 1.67
PTPN11-202ENST00000392597 RGS3P49796 1198 aa25.47■■□□□ 1.67
PTPN11-202ENST00000392597 SPATA31A3Q5VYP0 1347 aa25.46■■□□□ 1.67
PTPN11-202ENST00000392597 BABAM1Q9NWV8 329 aa25.46■■□□□ 1.67
PTPN11-202ENST00000392597 NCAPD2Q15021 1401 aa25.46■■□□□ 1.67
PTPN11-202ENST00000392597 MSH5O43196 834 aa25.45■■□□□ 1.67
PTPN11-202ENST00000392597 TSPYL4Q9UJ04 414 aa25.45■■□□□ 1.66
PTPN11-202ENST00000392597 LRRC59Q96AG4 307 aaKnown RBP25.44■■□□□ 1.66
PTPN11-202ENST00000392597 NBPF6Q5VWK0 638 aa25.43■■□□□ 1.66
PTPN11-202ENST00000392597 NBPF4Q96M43 638 aa25.43■■□□□ 1.66
PTPN11-202ENST00000392597 CAMTA1Q9Y6Y1 1673 aa25.42■■□□□ 1.66
PTPN11-202ENST00000392597 SOS1Q07889 1333 aaPredicted RBP25.41■■□□□ 1.66
PTPN11-202ENST00000392597 ZBTB7BO15156 539 aaPredicted RBP25.4■■□□□ 1.66
PTPN11-202ENST00000392597 C8orf34Q49A92 452 aa25.4■■□□□ 1.66
PTPN11-202ENST00000392597 LMOD2Q6P5Q4 547 aa25.4■■□□□ 1.66
PTPN11-202ENST00000392597 PTPRCP08575 1304 aa25.4■■□□□ 1.66
PTPN11-202ENST00000392597 RGPD2P0DJD1 1756 aa25.4■■□□□ 1.66
PTPN11-202ENST00000392597 KRT24Q2M2I5 525 aa25.4■■□□□ 1.66
PTPN11-202ENST00000392597 USHBP1Q8N6Y0 703 aa25.4■■□□□ 1.66
PTPN11-202ENST00000392597 FBXO41Q8TF61 875 aa25.4■■□□□ 1.66
PTPN11-202ENST00000392597 PDZRN3Q9UPQ7 1066 aa25.4■■□□□ 1.66
PTPN11-202ENST00000392597 VIRMAQ69YN4 1812 aaKnown RBP25.4■■□□□ 1.66
PTPN11-202ENST00000392597 MED1Q15648 1581 aaPredicted RBP25.38■■□□□ 1.65
PTPN11-202ENST00000392597 SMC5Q8IY18 1101 aa25.38■■□□□ 1.65
PTPN11-202ENST00000392597 IL17REQ8NFR9 667 aa25.38■■□□□ 1.65
PTPN11-202ENST00000392597 IPO9Q96P70 1041 aaKnown RBP25.38■■□□□ 1.65
PTPN11-202ENST00000392597 CEMIPQ8WUJ3 1361 aa25.37■■□□□ 1.65
PTPN11-202ENST00000392597 LMO7Q8WWI1 1683 aa25.37■■□□□ 1.65
PTPN11-202ENST00000392597 ZBTB7CA1YPR0 619 aa25.36■■□□□ 1.65
PTPN11-202ENST00000392597 MIS18AQ9NYP9 233 aa25.36■■□□□ 1.65
PTPN11-202ENST00000392597 TAF7Q15545 349 aaPredicted RBP25.36■■□□□ 1.65
PTPN11-202ENST00000392597 INTS3Q68E01 1043 aaKnown RBP25.36■■□□□ 1.65
PTPN11-202ENST00000392597 RGS12O14924 1447 aa25.35■■□□□ 1.65
PTPN11-202ENST00000392597 HSPA1LP34931 641 aa25.35■■□□□ 1.65
PTPN11-202ENST00000392597 ANKRD24Q8TF21 1146 aa25.35■■□□□ 1.65
PTPN11-202ENST00000392597 AMOTQ4VCS5 1084 aa25.34■■□□□ 1.65
PTPN11-202ENST00000392597 COL22A1Q8NFW1 1626 aaPredicted RBP25.34■■□□□ 1.65
PTPN11-202ENST00000392597 ABCC6O95255 1503 aa25.34■■□□□ 1.65
PTPN11-202ENST00000392597 CACNA1FO60840 1977 aa25.33■■□□□ 1.65
PTPN11-202ENST00000392597 PLEKHO1Q53GL0 409 aaPredicted RBP25.33■■□□□ 1.65
PTPN11-202ENST00000392597 CRYBG1Q9Y4K1 1723 aa25.33■■□□□ 1.64
PTPN11-202ENST00000392597 OVOS2A0A0G2JMS6 1433 aa25.31■■□□□ 1.64
PTPN11-202ENST00000392597 JCADQ9P266 1359 aa25.31■■□□□ 1.64
PTPN11-202ENST00000392597 AKAP4Q5JQC9 854 aa25.31■■□□□ 1.64
PTPN11-202ENST00000392597 SLC4A2P04920 1241 aa25.3■■□□□ 1.64
PTPN11-202ENST00000392597 RGPD5Q99666 1765 aa25.3■■□□□ 1.64
PTPN11-202ENST00000392597 FAM208AQ9UK61 1670 aaKnown RBP25.3■■□□□ 1.64
PTPN11-202ENST00000392597 ERBB3P21860 1342 aa25.29■■□□□ 1.64
PTPN11-202ENST00000392597 AXIN2Q9Y2T1 843 aa25.29■■□□□ 1.64
PTPN11-202ENST00000392597 NPM2Q86SE8 214 aaKnown RBP25.28■■□□□ 1.64
PTPN11-202ENST00000392597 ABCA3Q99758 1704 aa25.28■■□□□ 1.64
PTPN11-202ENST00000392597 CCDC30Q5VVM6 783 aa25.28■■□□□ 1.64
PTPN11-202ENST00000392597 STK31Q9BXU1 1019 aa25.28■■□□□ 1.64
PTPN11-202ENST00000392597 NOP58Q9Y2X3 529 aaKnown RBP25.28■■□□□ 1.64
PTPN11-202ENST00000392597 COL18A1P39060 1754 aa25.27■■□□□ 1.64
PTPN11-202ENST00000392597 ZNF530Q6P9A1 599 aaPredicted RBP25.27■■□□□ 1.64
PTPN11-202ENST00000392597 GCC1Q96CN9 775 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms