RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SOS2Q07890 1332 aaPredicted RBP14.72□□□□□ -0.05
SMARCAL1-203ENST00000392128 CHL1O00533 1208 aa14.72□□□□□ -0.05
SMARCAL1-203ENST00000392128 BRPF1P55201 1214 aaPredicted RBP14.72□□□□□ -0.05
SMARCAL1-203ENST00000392128 ZKSCAN2Q63HK3 967 aa14.72□□□□□ -0.05
SMARCAL1-203ENST00000392128 RTF1Q92541 710 aaKnown RBP14.72□□□□□ -0.05
SMARCAL1-203ENST00000392128 VAMP4O75379 141 aa14.71□□□□□ -0.05
SMARCAL1-203ENST00000392128 USHBP1Q8N6Y0 703 aa14.71□□□□□ -0.05
SMARCAL1-203ENST00000392128 ANKRD24Q8TF21 1146 aa14.71□□□□□ -0.05
SMARCAL1-203ENST00000392128 FAM208AQ9UK61 1670 aaKnown RBP14.71□□□□□ -0.05
SMARCAL1-203ENST00000392128 PLEKHG5O94827 1062 aa14.71□□□□□ -0.06
SMARCAL1-203ENST00000392128 MS4A1P11836 297 aa14.71□□□□□ -0.06
SMARCAL1-203ENST00000392128 PANK1Q8TE04 598 aa14.71□□□□□ -0.06
SMARCAL1-203ENST00000392128 AXIN2Q9Y2T1 843 aa14.71□□□□□ -0.06
SMARCAL1-203ENST00000392128 MAP3K5Q99683 1374 aa14.7□□□□□ -0.06
SMARCAL1-203ENST00000392128 KIF16BQ96L93 1317 aa14.7□□□□□ -0.06
SMARCAL1-203ENST00000392128 GNAT3A8MTJ3 354 aa14.7□□□□□ -0.06
SMARCAL1-203ENST00000392128 CPDO75976 1380 aa14.7□□□□□ -0.06
SMARCAL1-203ENST00000392128 ZC3H6P61129 1189 aaKnown RBP14.7□□□□□ -0.06
SMARCAL1-203ENST00000392128 AAMPQ13685 434 aa14.7□□□□□ -0.06
SMARCAL1-203ENST00000392128 LRRC59Q96AG4 307 aaKnown RBP14.7□□□□□ -0.06
SMARCAL1-203ENST00000392128 KIAA0232Q92628 1395 aa14.69□□□□□ -0.06
SMARCAL1-203ENST00000392128 ERBB3P21860 1342 aa14.69□□□□□ -0.06
SMARCAL1-203ENST00000392128 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
SMARCAL1-203ENST00000392128 TSHZ2Q9NRE2 1034 aa14.69□□□□□ -0.06
SMARCAL1-203ENST00000392128 TWISTNBQ3B726 338 aaPredicted RBP14.68□□□□□ -0.06
SMARCAL1-203ENST00000392128 ABCA3Q99758 1704 aa14.68□□□□□ -0.06
SMARCAL1-203ENST00000392128 RLBP1P12271 317 aa14.68□□□□□ -0.06
SMARCAL1-203ENST00000392128 C8orf58Q8NAV2 365 aa14.68□□□□□ -0.06
SMARCAL1-203ENST00000392128 COG6Q9Y2V7 657 aa14.68□□□□□ -0.06
SMARCAL1-203ENST00000392128 ATF7IPQ6VMQ6 1270 aa14.67□□□□□ -0.06
SMARCAL1-203ENST00000392128 IPO8O15397 1037 aaKnown RBP14.67□□□□□ -0.06
SMARCAL1-203ENST00000392128 HAP1P54257 671 aaPredicted RBP14.67□□□□□ -0.06
SMARCAL1-203ENST00000392128 DZIP1LQ8IYY4 767 aaKnown RBP14.67□□□□□ -0.06
SMARCAL1-203ENST00000392128 CABLES1Q8TDN4 633 aa14.67□□□□□ -0.06
SMARCAL1-203ENST00000392128 NOB1Q9ULX3 412 aaKnown RBP14.67□□□□□ -0.06
SMARCAL1-203ENST00000392128 TNNQ9UQP3 1299 aa14.67□□□□□ -0.06
SMARCAL1-203ENST00000392128 TRIM27P14373 513 aa14.66□□□□□ -0.06
SMARCAL1-203ENST00000392128 KDM2BQ8NHM5 1336 aa14.66□□□□□ -0.06
SMARCAL1-203ENST00000392128 AMOTQ4VCS5 1084 aa14.66□□□□□ -0.06
SMARCAL1-203ENST00000392128 FTSJ3Q8IY81 847 aaKnown RBP14.66□□□□□ -0.06
SMARCAL1-203ENST00000392128 LTBP4Q8N2S1 1624 aa14.66□□□□□ -0.06
SMARCAL1-203ENST00000392128 MVPQ14764 893 aaKnown RBP14.65□□□□□ -0.06
SMARCAL1-203ENST00000392128 MRPL50Q8N5N7 158 aaKnown RBP14.65□□□□□ -0.06
SMARCAL1-203ENST00000392128 CLUAP1Q96AJ1 413 aa14.65□□□□□ -0.06
SMARCAL1-203ENST00000392128 BABAM1Q9NWV8 329 aa14.65□□□□□ -0.06
SMARCAL1-203ENST00000392128 VIRMAQ69YN4 1812 aaKnown RBP14.65□□□□□ -0.06
SMARCAL1-203ENST00000392128 PLEKHO1Q53GL0 409 aaPredicted RBP14.65□□□□□ -0.06
SMARCAL1-203ENST00000392128 CENPQQ7L2Z9 268 aaPredicted RBP14.65□□□□□ -0.06
SMARCAL1-203ENST00000392128 CEMIPQ8WUJ3 1361 aa14.65□□□□□ -0.06
SMARCAL1-203ENST00000392128 IL17REQ8NFR9 667 aa14.64□□□□□ -0.07
SMARCAL1-203ENST00000392128 ARHGAP45Q92619 1136 aa14.64□□□□□ -0.07
SMARCAL1-203ENST00000392128 PLEKHG2Q9H7P9 1386 aa14.64□□□□□ -0.07
SMARCAL1-203ENST00000392128 ELL2O00472 640 aaPredicted RBP14.64□□□□□ -0.07
SMARCAL1-203ENST00000392128 TSPYL4Q9UJ04 414 aa14.64□□□□□ -0.07
SMARCAL1-203ENST00000392128 AKAP4Q5JQC9 854 aa14.63□□□□□ -0.07
SMARCAL1-203ENST00000392128 OVOS2A0A0G2JMS6 1433 aa14.63□□□□□ -0.07
SMARCAL1-203ENST00000392128 ROBO1Q9Y6N7 1651 aa14.62□□□□□ -0.07
SMARCAL1-203ENST00000392128 ADAMTS7Q9UKP4 1686 aa14.62□□□□□ -0.07
SMARCAL1-203ENST00000392128 KDM3BQ7LBC6 1761 aa14.61□□□□□ -0.07
SMARCAL1-203ENST00000392128 TAF7Q15545 349 aaPredicted RBP14.61□□□□□ -0.07
SMARCAL1-203ENST00000392128 ZNF530Q6P9A1 599 aaPredicted RBP14.61□□□□□ -0.07
SMARCAL1-203ENST00000392128 MIS18AQ9NYP9 233 aa14.61□□□□□ -0.07
SMARCAL1-203ENST00000392128 DDX19BQ9UMR2 479 aa14.61□□□□□ -0.07
SMARCAL1-203ENST00000392128 AHDC1Q5TGY3 1603 aaPredicted RBP14.61□□□□□ -0.07
SMARCAL1-203ENST00000392128 CHRNA2Q15822 529 aa14.61□□□□□ -0.07
SMARCAL1-203ENST00000392128 KRT24Q2M2I5 525 aa14.61□□□□□ -0.07
SMARCAL1-203ENST00000392128 SOS1Q07889 1333 aaPredicted RBP14.6□□□□□ -0.07
SMARCAL1-203ENST00000392128 NLRP2Q9NX02 1062 aa14.6□□□□□ -0.07
SMARCAL1-203ENST00000392128 C1orf141Q5JVX7 400 aa14.59□□□□□ -0.07
SMARCAL1-203ENST00000392128 TMEM57Q8N5G2 664 aa14.59□□□□□ -0.07
SMARCAL1-203ENST00000392128 PKD1L3Q7Z443 1732 aa14.59□□□□□ -0.07
SMARCAL1-203ENST00000392128 CACNA1FO60840 1977 aa14.59□□□□□ -0.07
SMARCAL1-203ENST00000392128 SIPA1L3O60292 1781 aaPredicted RBP14.59□□□□□ -0.07
SMARCAL1-203ENST00000392128 CSB-PGBD3P0DP91 1061 aa14.58□□□□□ -0.07
SMARCAL1-203ENST00000392128 ITPRIPQ8IWB1 547 aa14.58□□□□□ -0.07
SMARCAL1-203ENST00000392128 RAPGEF4Q8WZA2 1011 aa14.58□□□□□ -0.07
SMARCAL1-203ENST00000392128 PRDM11Q9NQV5 511 aa14.58□□□□□ -0.07
SMARCAL1-203ENST00000392128 ABCC4O15439 1325 aa14.58□□□□□ -0.08
SMARCAL1-203ENST00000392128 MEGF6O75095 1541 aa14.58□□□□□ -0.08
SMARCAL1-203ENST00000392128 API5Q9BZZ5 524 aaKnown RBP14.57□□□□□ -0.08
SMARCAL1-203ENST00000392128 LGR6Q9HBX8 967 aa14.57□□□□□ -0.08
SMARCAL1-203ENST00000392128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.57□□□□□ -0.085e-8■□□□□ 10.1
SMARCAL1-203ENST00000392128 TCERG1O14776 1098 aaKnown RBP14.57□□□□□ -0.08
SMARCAL1-203ENST00000392128 SCN11AQ9UI33 1791 aa14.57□□□□□ -0.08
SMARCAL1-203ENST00000392128 COL22A1Q8NFW1 1626 aaPredicted RBP14.57□□□□□ -0.08
SMARCAL1-203ENST00000392128 COL5A2P05997 1499 aaPredicted RBP14.57□□□□□ -0.08
SMARCAL1-203ENST00000392128 RNMTO43148 476 aaKnown RBP14.56□□□□□ -0.08
SMARCAL1-203ENST00000392128 TATP17735 454 aaPredicted RBP14.56□□□□□ -0.08
SMARCAL1-203ENST00000392128 PCDHB15Q9Y5E8 787 aa14.56□□□□□ -0.08
SMARCAL1-203ENST00000392128 PARP4Q9UKK3 1724 aaKnown RBP14.56□□□□□ -0.08
SMARCAL1-203ENST00000392128 IGHDP01880 384 aa14.56□□□□□ -0.08
SMARCAL1-203ENST00000392128 WDR17Q8IZU2 1322 aa14.56□□□□□ -0.08
SMARCAL1-203ENST00000392128 PTPRCP08575 1304 aa14.55□□□□□ -0.08
SMARCAL1-203ENST00000392128 MPRIPQ6WCQ1 1025 aa14.55□□□□□ -0.08
SMARCAL1-203ENST00000392128 CHMP4BQ9H444 224 aaKnown RBP14.55□□□□□ -0.08
SMARCAL1-203ENST00000392128 SPG7Q9UQ90 795 aa14.55□□□□□ -0.08
SMARCAL1-203ENST00000392128 RGS12O14924 1447 aa14.55□□□□□ -0.08
SMARCAL1-203ENST00000392128 TEFQ10587 303 aa14.54□□□□□ -0.08
SMARCAL1-203ENST00000392128 ZBTB40Q9NUA8 1239 aa14.54□□□□□ -0.08
SMARCAL1-203ENST00000392128 SLC4A2P04920 1241 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms