RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 AMER1Q5JTC6 1135 aaPredicted RBP20.41■□□□□ 0.86
SNRPN-202ENST00000390687 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
SNRPN-202ENST00000390687 KAT6BQ8WYB5 2073 aa20.4■□□□□ 0.86
SNRPN-202ENST00000390687 PER1O15534 1290 aaPredicted RBP20.4■□□□□ 0.86
SNRPN-202ENST00000390687 RREB1Q92766 1687 aa20.4■□□□□ 0.86
SNRPN-202ENST00000390687 TATP17735 454 aaPredicted RBP20.39■□□□□ 0.85
SNRPN-202ENST00000390687 EYA1Q99502 592 aa20.39■□□□□ 0.85
SNRPN-202ENST00000390687 NBPF14Q5TI25 921 aa20.38■□□□□ 0.85
SNRPN-202ENST00000390687 NUP188Q5SRE5 1749 aa20.37■□□□□ 0.85
SNRPN-202ENST00000390687 EIF4A2Q14240 407 aaKnown RBP20.37■□□□□ 0.85
SNRPN-202ENST00000390687 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
SNRPN-202ENST00000390687 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
SNRPN-202ENST00000390687 NHSQ6T4R5 1651 aa20.36■□□□□ 0.85
SNRPN-202ENST00000390687 TXNRD1Q16881 649 aa20.36■□□□□ 0.85
SNRPN-202ENST00000390687 PRIM1P49642 420 aaKnown RBP20.35■□□□□ 0.85
SNRPN-202ENST00000390687 SHANK3Q9BYB0 1731 aa20.35■□□□□ 0.85
SNRPN-202ENST00000390687 NCAPD2Q15021 1401 aa20.35■□□□□ 0.85
SNRPN-202ENST00000390687 CYP27B1O15528 508 aa20.32■□□□□ 0.84
SNRPN-202ENST00000390687 SYTL4Q96C24 671 aaPredicted RBP20.32■□□□□ 0.84
SNRPN-202ENST00000390687 ANO8Q9HCE9 1232 aaPredicted RBP20.32■□□□□ 0.84
SNRPN-202ENST00000390687 CC2D1BQ5T0F9 858 aaKnown RBP20.31■□□□□ 0.84
SNRPN-202ENST00000390687 PCDH11XQ9BZA7 1347 aa20.31■□□□□ 0.84
SNRPN-202ENST00000390687 PCDH11YQ9BZA8 1340 aa20.31■□□□□ 0.84
SNRPN-202ENST00000390687 BTAF1O14981 1849 aa20.3■□□□□ 0.84
SNRPN-202ENST00000390687 SPG7Q9UQ90 795 aa20.28■□□□□ 0.84
SNRPN-202ENST00000390687 IGSF1Q8N6C5 1336 aa20.28■□□□□ 0.84
SNRPN-202ENST00000390687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.27■□□□□ 0.843e-8■□□□□ 11.3
SNRPN-202ENST00000390687 MTHFSP49914 203 aa20.27■□□□□ 0.83
SNRPN-202ENST00000390687 LRRC4BQ9NT99 713 aa20.27■□□□□ 0.83
SNRPN-202ENST00000390687 DOT1LQ8TEK3 1739 aa20.26■□□□□ 0.83
SNRPN-202ENST00000390687 NPC1L1Q9UHC9 1359 aa20.25■□□□□ 0.83
SNRPN-202ENST00000390687 IL13P35225 146 aa20.25■□□□□ 0.83
SNRPN-202ENST00000390687 CNGB1Q14028 1251 aaPredicted RBP20.25■□□□□ 0.83
SNRPN-202ENST00000390687 NKX1-1Q15270 411 aaPredicted RBP20.25■□□□□ 0.83
SNRPN-202ENST00000390687 SLC15A2Q16348 729 aa20.25■□□□□ 0.83
SNRPN-202ENST00000390687 PKD1L3Q7Z443 1732 aa20.24■□□□□ 0.83
SNRPN-202ENST00000390687 PDGFDQ9GZP0 370 aaPredicted RBP20.24■□□□□ 0.83
SNRPN-202ENST00000390687 STK32BQ9NY57 414 aa20.24■□□□□ 0.83
SNRPN-202ENST00000390687 LRP5O75197 1615 aa20.24■□□□□ 0.83
SNRPN-202ENST00000390687 SLC27A3Q5K4L6 730 aa20.22■□□□□ 0.83
SNRPN-202ENST00000390687 MPRIPQ6WCQ1 1025 aa20.22■□□□□ 0.83
SNRPN-202ENST00000390687 AEBP1Q8IUX7 1158 aa20.22■□□□□ 0.83
SNRPN-202ENST00000390687 PHKG2P15735 406 aa20.22■□□□□ 0.83
SNRPN-202ENST00000390687 KCNQ4P56696 695 aa20.22■□□□□ 0.83
SNRPN-202ENST00000390687 IFNL2Q8IZJ0 200 aa20.22■□□□□ 0.83
SNRPN-202ENST00000390687 SULT6B1Q6IMI4 303 aa20.21■□□□□ 0.83
SNRPN-202ENST00000390687 PLEKHG2Q9H7P9 1386 aa20.19■□□□□ 0.82
SNRPN-202ENST00000390687 ZNF827Q17R98 1081 aa20.18■□□□□ 0.82
SNRPN-202ENST00000390687 PLEKHO1Q53GL0 409 aaPredicted RBP20.18■□□□□ 0.82
SNRPN-202ENST00000390687 PIGBQ92521 554 aa20.18■□□□□ 0.82
SNRPN-202ENST00000390687 SPON1Q9HCB6 807 aa20.18■□□□□ 0.82
SNRPN-202ENST00000390687 AKT1S1Q96B36 256 aa20.17■□□□□ 0.82
SNRPN-202ENST00000390687 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
SNRPN-202ENST00000390687 AMOTQ4VCS5 1084 aa20.17■□□□□ 0.82
SNRPN-202ENST00000390687 CCNL1Q9UK58 526 aaPredicted RBP20.17■□□□□ 0.82
SNRPN-202ENST00000390687 PAPPAQ13219 1627 aa20.17■□□□□ 0.82
SNRPN-202ENST00000390687 KDRP35968 1356 aa20.16■□□□□ 0.82
SNRPN-202ENST00000390687 LY75O60449 1722 aa20.16■□□□□ 0.82
SNRPN-202ENST00000390687 DIAPH1O60610 1272 aaKnown RBP20.16■□□□□ 0.82
SNRPN-202ENST00000390687 ITGB4P16144 1822 aa20.15■□□□□ 0.82
SNRPN-202ENST00000390687 ZBTB7AO95365 584 aa20.15■□□□□ 0.82
SNRPN-202ENST00000390687 CASZ1Q86V15 1759 aa20.15■□□□□ 0.82
SNRPN-202ENST00000390687 ZNF530Q6P9A1 599 aaPredicted RBP20.13■□□□□ 0.81
SNRPN-202ENST00000390687 PALLDQ8WX93 1383 aa20.13■□□□□ 0.81
SNRPN-202ENST00000390687 HMOX1P09601 288 aa20.12■□□□□ 0.81
SNRPN-202ENST00000390687 SMARCC1Q92922 1105 aaPredicted RBP20.12■□□□□ 0.81
SNRPN-202ENST00000390687 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
SNRPN-202ENST00000390687 ATF5Q9Y2D1 282 aaPredicted RBP20.12■□□□□ 0.81
SNRPN-202ENST00000390687 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
SNRPN-202ENST00000390687 DCAF5Q96JK2 942 aa20.12■□□□□ 0.81
SNRPN-202ENST00000390687 ERVV-2B6SEH9 535 aa20.11■□□□□ 0.81
SNRPN-202ENST00000390687 TFCP2L1Q9NZI6 479 aa20.11■□□□□ 0.81
SNRPN-202ENST00000390687 ASAP1Q9ULH1 1129 aa20.11■□□□□ 0.81
SNRPN-202ENST00000390687 PTGER2P43116 358 aa20.09■□□□□ 0.81
SNRPN-202ENST00000390687 C1orf141Q5JVX7 400 aa20.09■□□□□ 0.81
SNRPN-202ENST00000390687 MTFR1LQ9H019 292 aa20.09■□□□□ 0.81
SNRPN-202ENST00000390687 ATG3Q9NT62 314 aa20.09■□□□□ 0.81
SNRPN-202ENST00000390687 COL3A1P02461 1466 aaPredicted RBP20.08■□□□□ 0.81
SNRPN-202ENST00000390687 PPP2R1AP30153 589 aa20.08■□□□□ 0.81
SNRPN-202ENST00000390687 PNPLA7Q6ZV29 1317 aa20.08■□□□□ 0.81
SNRPN-202ENST00000390687 PPP1R1BQ9UD71 204 aaPredicted RBP20.07■□□□□ 0.8
SNRPN-202ENST00000390687 KDM6AO15550 1401 aaPredicted RBP20.07■□□□□ 0.8
SNRPN-202ENST00000390687 LOC102724428A0A0B4J2F2 783 aa20.07■□□□□ 0.8
SNRPN-202ENST00000390687 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
SNRPN-202ENST00000390687 SIK1P57059 783 aa20.07■□□□□ 0.8
SNRPN-202ENST00000390687 SGIP1Q9BQI5 828 aa20.06■□□□□ 0.8
SNRPN-202ENST00000390687 CABP4P57796 275 aa20.05■□□□□ 0.8
SNRPN-202ENST00000390687 AKAP4Q5JQC9 854 aa20.05■□□□□ 0.8
SNRPN-202ENST00000390687 UTRNP46939 3433 aa20.05■□□□□ 0.8
SNRPN-202ENST00000390687 HMGB2P26583 209 aaKnown RBP20.04■□□□□ 0.8
SNRPN-202ENST00000390687 MTHFSDQ2M296 383 aaKnown RBP20.04■□□□□ 0.8
SNRPN-202ENST00000390687 NFATC2IPQ8NCF5 419 aa20.04■□□□□ 0.8
SNRPN-202ENST00000390687 SLC16A10Q8TF71 515 aa20.04■□□□□ 0.8
SNRPN-202ENST00000390687 CFAP53Q96M91 514 aa20.04■□□□□ 0.8
SNRPN-202ENST00000390687 COL23A1Q86Y22 540 aaPredicted RBP20.03■□□□□ 0.8
SNRPN-202ENST00000390687 QSER1Q2KHR3 1735 aa20.03■□□□□ 0.8
SNRPN-202ENST00000390687 ITPK1Q13572 414 aa20.02■□□□□ 0.8
SNRPN-202ENST00000390687 LGR6Q9HBX8 967 aa20.02■□□□□ 0.8
SNRPN-202ENST00000390687 C5P01031 1676 aa20.02■□□□□ 0.8
SNRPN-202ENST00000390687 TAF1LQ8IZX4 1826 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms