RNA–Protein interactions for RNA: ENST00000390617.2

IGHV3-35-201, Transcript of immunoglobulin heavy variable 3-35 (non-functional), humanhuman

APPRIS P1 BASIC

Gene IGHV3-35, Length 366 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-35-201ENST00000390617 SMG6Q86US8 1419 aaKnown RBP21.1■□□□□ 0.97
IGHV3-35-201ENST00000390617 COL24A1Q17RW2 1714 aa21.09■□□□□ 0.97
IGHV3-35-201ENST00000390617 TUBGCP6Q96RT7 1819 aa21.09■□□□□ 0.97
IGHV3-35-201ENST00000390617 RRS1Q15050 365 aaKnown RBP21.09■□□□□ 0.97
IGHV3-35-201ENST00000390617 ZNF827Q17R98 1081 aa21.09■□□□□ 0.97
IGHV3-35-201ENST00000390617 ZCRB1Q8TBF4 217 aaKnown RBP21.09■□□□□ 0.97
IGHV3-35-201ENST00000390617 CGNL1Q0VF96 1302 aa21.08■□□□□ 0.97
IGHV3-35-201ENST00000390617 NSD2O96028 1365 aa21.08■□□□□ 0.96
IGHV3-35-201ENST00000390617 KIF24Q5T7B8 1368 aa21.08■□□□□ 0.96
IGHV3-35-201ENST00000390617 NBPF6Q5VWK0 638 aa21.07■□□□□ 0.96
IGHV3-35-201ENST00000390617 AKT1S1Q96B36 256 aa21.07■□□□□ 0.96
IGHV3-35-201ENST00000390617 NBPF4Q96M43 638 aa21.07■□□□□ 0.96
IGHV3-35-201ENST00000390617 SYT17Q9BSW7 474 aa21.07■□□□□ 0.96
IGHV3-35-201ENST00000390617 FHDC1Q9C0D6 1143 aaPredicted RBP21.07■□□□□ 0.96
IGHV3-35-201ENST00000390617 SYTL4Q96C24 671 aaPredicted RBP21.06■□□□□ 0.96
IGHV3-35-201ENST00000390617 INSRP06213 1382 aa21.06■□□□□ 0.96
IGHV3-35-201ENST00000390617 CHD4Q14839 1912 aa21.06■□□□□ 0.96
IGHV3-35-201ENST00000390617 PRIM1P49642 420 aaKnown RBP21.05■□□□□ 0.96
IGHV3-35-201ENST00000390617 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
IGHV3-35-201ENST00000390617 TIMELESSQ9UNS1 1208 aa21.05■□□□□ 0.96
IGHV3-35-201ENST00000390617 FLT4P35916 1363 aa21.05■□□□□ 0.96
IGHV3-35-201ENST00000390617 MAP3K5Q99683 1374 aa21.05■□□□□ 0.96
IGHV3-35-201ENST00000390617 SLC16A10Q8TF71 515 aa21.04■□□□□ 0.96
IGHV3-35-201ENST00000390617 ANKRD26Q9UPS8 1709 aa21.04■□□□□ 0.96
IGHV3-35-201ENST00000390617 RAPGEF4Q8WZA2 1011 aa21.03■□□□□ 0.96
IGHV3-35-201ENST00000390617 ARXQ96QS3 562 aa21.03■□□□□ 0.96
IGHV3-35-201ENST00000390617 PNPLA7Q6ZV29 1317 aa21.02■□□□□ 0.95
IGHV3-35-201ENST00000390617 HSP90AB2PQ58FF8 381 aa21.01■□□□□ 0.95
IGHV3-35-201ENST00000390617 USHBP1Q8N6Y0 703 aa21.01■□□□□ 0.95
IGHV3-35-201ENST00000390617 NSD3Q9BZ95 1437 aa21.01■□□□□ 0.95
IGHV3-35-201ENST00000390617 TATP17735 454 aaPredicted RBP21■□□□□ 0.95
IGHV3-35-201ENST00000390617 PKD1L3Q7Z443 1732 aa21■□□□□ 0.95
IGHV3-35-201ENST00000390617 MAP2P11137 1827 aaKnown RBP20.99■□□□□ 0.95
IGHV3-35-201ENST00000390617 CARD14Q9BXL6 1004 aa20.99■□□□□ 0.95
IGHV3-35-201ENST00000390617 PCDH11XQ9BZA7 1347 aa20.99■□□□□ 0.95
IGHV3-35-201ENST00000390617 PCDH11YQ9BZA8 1340 aa20.99■□□□□ 0.95
IGHV3-35-201ENST00000390617 CLSPNQ9HAW4 1339 aa20.99■□□□□ 0.95
IGHV3-35-201ENST00000390617 ITGB4P16144 1822 aa20.99■□□□□ 0.95
IGHV3-35-201ENST00000390617 C5P01031 1676 aa20.99■□□□□ 0.95
IGHV3-35-201ENST00000390617 TFCP2L1Q9NZI6 479 aa20.98■□□□□ 0.95
IGHV3-35-201ENST00000390617 TAF1LQ8IZX4 1826 aa20.98■□□□□ 0.95
IGHV3-35-201ENST00000390617 UTRNP46939 3433 aa20.98■□□□□ 0.95
IGHV3-35-201ENST00000390617 KCNQ4P56696 695 aa20.97■□□□□ 0.95
IGHV3-35-201ENST00000390617 CCNL1Q9UK58 526 aaPredicted RBP20.97■□□□□ 0.95
IGHV3-35-201ENST00000390617 NCAPD2Q15021 1401 aa20.96■□□□□ 0.95
IGHV3-35-201ENST00000390617 TOGARAM1Q9Y4F4 1720 aa20.96■□□□□ 0.95
IGHV3-35-201ENST00000390617 POLD1P28340 1107 aa20.96■□□□□ 0.95
IGHV3-35-201ENST00000390617 EMILIN1Q9Y6C2 1016 aa20.95■□□□□ 0.94
IGHV3-35-201ENST00000390617 HMGB2P26583 209 aaKnown RBP20.93■□□□□ 0.94
IGHV3-35-201ENST00000390617 CYP27B1O15528 508 aa20.91■□□□□ 0.94
IGHV3-35-201ENST00000390617 WASHC2AQ641Q2 1341 aa20.91■□□□□ 0.94
IGHV3-35-201ENST00000390617 PALLDQ8WX93 1383 aa20.89■□□□□ 0.93
IGHV3-35-201ENST00000390617 C4BP0C0L5 1744 aa20.88■□□□□ 0.93
IGHV3-35-201ENST00000390617 MPRIPQ6WCQ1 1025 aa20.88■□□□□ 0.93
IGHV3-35-201ENST00000390617 COL23A1Q86Y22 540 aaPredicted RBP20.88■□□□□ 0.93
IGHV3-35-201ENST00000390617 ZNF784Q8NCA9 323 aaPredicted RBP20.88■□□□□ 0.93
IGHV3-35-201ENST00000390617 PPM1GO15355 546 aaPredicted RBP20.87■□□□□ 0.93
IGHV3-35-201ENST00000390617 NKX1-1Q15270 411 aaPredicted RBP20.87■□□□□ 0.93
IGHV3-35-201ENST00000390617 UBR3Q6ZT12 1888 aa20.86■□□□□ 0.93
IGHV3-35-201ENST00000390617 GPR162Q16538 588 aa20.86■□□□□ 0.93
IGHV3-35-201ENST00000390617 KLHL34Q8N239 644 aa20.86■□□□□ 0.93
IGHV3-35-201ENST00000390617 SMARCC1Q92922 1105 aaPredicted RBP20.86■□□□□ 0.93
IGHV3-35-201ENST00000390617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.86■□□□□ 0.93
IGHV3-35-201ENST00000390617 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
IGHV3-35-201ENST00000390617 FLAD1Q8NFF5 587 aa20.85■□□□□ 0.93
IGHV3-35-201ENST00000390617 POLKQ9UBT6 870 aa20.85■□□□□ 0.93
IGHV3-35-201ENST00000390617 PLEKHG2Q9H7P9 1386 aa20.85■□□□□ 0.93
IGHV3-35-201ENST00000390617 MSH5O43196 834 aa20.84■□□□□ 0.93
IGHV3-35-201ENST00000390617 EYA1Q99502 592 aa20.84■□□□□ 0.93
IGHV3-35-201ENST00000390617 NLGN2Q8NFZ4 835 aa20.82■□□□□ 0.92
IGHV3-35-201ENST00000390617 PIGBQ92521 554 aa20.82■□□□□ 0.92
IGHV3-35-201ENST00000390617 GOLGB1Q14789 3259 aaKnown RBP20.8■□□□□ 0.92
IGHV3-35-201ENST00000390617 EIF4G2P78344 907 aaKnown RBP eCLIP20.8■□□□□ 0.92
IGHV3-35-201ENST00000390617 POLR3GLQ9BT43 218 aa20.8■□□□□ 0.92
IGHV3-35-201ENST00000390617 IFNL2Q8IZJ0 200 aa20.79■□□□□ 0.92
IGHV3-35-201ENST00000390617 PHKG2P15735 406 aa20.78■□□□□ 0.92
IGHV3-35-201ENST00000390617 EIF4A2Q14240 407 aaKnown RBP20.78■□□□□ 0.92
IGHV3-35-201ENST00000390617 MSL1Q68DK7 614 aa20.78■□□□□ 0.92
IGHV3-35-201ENST00000390617 AK7Q96M32 723 aa20.78■□□□□ 0.92
IGHV3-35-201ENST00000390617 TMOD3Q9NYL9 352 aa20.78■□□□□ 0.92
IGHV3-35-201ENST00000390617 PELP1Q8IZL8 1130 aaKnown RBP20.77■□□□□ 0.92
IGHV3-35-201ENST00000390617 LOC102724428A0A0B4J2F2 783 aa20.76■□□□□ 0.91
IGHV3-35-201ENST00000390617 HSPA5P11021 654 aaKnown RBP20.76■□□□□ 0.91
IGHV3-35-201ENST00000390617 TNNT2P45379 298 aaPredicted RBP20.76■□□□□ 0.91
IGHV3-35-201ENST00000390617 SIK1P57059 783 aa20.76■□□□□ 0.91
IGHV3-35-201ENST00000390617 CD2APQ9Y5K6 639 aa20.76■□□□□ 0.91
IGHV3-35-201ENST00000390617 ZNF831Q5JPB2 1677 aa20.76■□□□□ 0.91
IGHV3-35-201ENST00000390617 IGSF1Q8N6C5 1336 aa20.76■□□□□ 0.91
IGHV3-35-201ENST00000390617 GRIN3BO60391 1043 aa20.75■□□□□ 0.91
IGHV3-35-201ENST00000390617 SSFA2P28290 1259 aa20.74■□□□□ 0.91
IGHV3-35-201ENST00000390617 AMIGO3Q86WK7 504 aa20.74■□□□□ 0.91
IGHV3-35-201ENST00000390617 PANK3Q9H999 370 aa20.74■□□□□ 0.91
IGHV3-35-201ENST00000390617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.73■□□□□ 0.91
IGHV3-35-201ENST00000390617 YBX3P16989 372 aaKnown RBP eCLIP20.73■□□□□ 0.91
IGHV3-35-201ENST00000390617 LINC00116Q8NCU8 138 aa20.73■□□□□ 0.91
IGHV3-35-201ENST00000390617 ASAP1Q9ULH1 1129 aa20.73■□□□□ 0.91
IGHV3-35-201ENST00000390617 PHF14O94880 888 aa20.71■□□□□ 0.91
IGHV3-35-201ENST00000390617 COL5A3P25940 1745 aaPredicted RBP20.7■□□□□ 0.9
IGHV3-35-201ENST00000390617 ATP6V1AP38606 617 aa20.7■□□□□ 0.9
IGHV3-35-201ENST00000390617 ITPK1Q13572 414 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms