RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 VASH1Q7L8A9 365 aaPredicted RBP3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 TSEN2Q8NCE0 465 aaKnown RBP3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 FOXD4L4Q8WXT5 416 aaPredicted RBP3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 ZNF428Q96B54 188 aa3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 MRGPRX2Q96LB1 330 aa3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 PRIMPOLQ96LW4 560 aa3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 RAB6BQ9NRW1 208 aa3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 PKD2L1Q9P0L9 805 aa3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 NOD1Q9Y239 953 aa3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 MAP4K5Q9Y4K4 846 aa3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 USP3Q9Y6I4 520 aa3.13□□□□□ -1.91
TRAJ41-201ENST00000390496 ATP2B4P23634 1241 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 VARSP26640 1264 aaKnown RBP3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 SSFA2P28290 1259 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 RPIAP49247 311 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 ERVK-9P63128 1117 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 PSME1Q06323 249 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 KCNA1Q09470 495 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 MAP7D1Q3KQU3 841 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 NOM1Q5C9Z4 860 aaKnown RBP3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 TBCELQ5QJ74 424 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 CCDC102BQ68D86 513 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 FAM200AQ8TCP9 573 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 CLP1Q92989 425 aaKnown RBP3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 CDK15Q96Q40 435 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 MKNK1Q9BUB5 465 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 ETNK1Q9HBU6 452 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 ZNF358Q9NW07 568 aa3.12□□□□□ -1.91
TRAJ41-201ENST00000390496 A0A0G2JS52 829 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 TNFRSF10AO00220 468 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 WNT7AO00755 349 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 ADH1CP00326 375 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 ADD1P35611 737 aaKnown RBP3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 GGCXP38435 758 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 SLC19A1P41440 591 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 EPHA4P54764 986 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 MFAP1P55081 439 aaKnown RBP3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 MCCD1P59942 119 aaPredicted RBP3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 FOXC1Q12948 553 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 CBLBQ13191 982 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 ZNF211Q13398 564 aaPredicted RBP3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 FKBP5Q13451 457 aaPredicted RBP3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 MTMR3Q13615 1198 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 PPP1R26Q5T8A7 1209 aaPredicted RBP3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 ZNF697Q5TEC3 545 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 SPRYD7Q5W111 196 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 TRIM67Q6ZTA4 783 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 TXNDC2Q86VQ3 553 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 TNS4Q8IZW8 715 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 LARGE2Q8N3Y3 721 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 KDF1Q8NAX2 398 aaPredicted RBP3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 ZFAND3Q9H8U3 227 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 ANO2Q9NQ90 1003 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 CXXC1Q9P0U4 656 aaPredicted RBP3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 SEPT3Q9UH03 358 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 MTMR7Q9Y216 660 aa3.11□□□□□ -1.91
TRAJ41-201ENST00000390496 J3QL48 77 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 C21orf2O43822 256 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 NNTQ13423 1086 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 SH3PXD2AQ5TCZ1 1133 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 TMCO4Q5TGY1 634 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 CC2D2BQ6DHV5 1058 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 TRIM50Q86XT4 487 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 SEPT12Q8IYM1 358 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 RGS22Q8NE09 1264 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 AGBL1Q96MI9 1066 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 ARHGEF10LQ9HCE6 1279 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 PLA2G2EQ9NZK7 142 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 SERTAD1Q9UHV2 236 aa3.1□□□□□ -1.91
TRAJ41-201ENST00000390496 LZTS3O60299 673 aaPredicted RBP3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 ALDH1A1P00352 501 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 IL2RAP01589 272 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 ATP1A2P50993 1020 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 GDF10P55107 478 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 SEC13P55735 322 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 SWI5Q1ZZU3 235 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 FAM26DQ5JW98 314 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 RNF20Q5VTR2 975 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 SND1Q7KZF4 910 aaKnown RBP eCLIP3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 CCDC116Q8IYX3 515 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 ZNF592Q92610 1267 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 ITPKCQ96DU7 683 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 KLRG1Q96E93 195 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 PRKD2Q9BZL6 878 aa3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 TSPAN10Q9H1Z9 355 aaPredicted RBP3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 CDV3Q9UKY7 258 aaKnown RBP3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 GNEQ9Y223 722 aaKnown RBP3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 CCDC9Q9Y3X0 531 aaKnown RBP3.09□□□□□ -1.91
TRAJ41-201ENST00000390496 A0A1W2PRU2 124 aa3.08□□□□□ -1.92
TRAJ41-201ENST00000390496 SOWAHDA6NJG2 315 aa3.08□□□□□ -1.92
TRAJ41-201ENST00000390496 H3BRB1 525 aa3.08□□□□□ -1.92
TRAJ41-201ENST00000390496 GDF9O60383 454 aa3.08□□□□□ -1.92
TRAJ41-201ENST00000390496 MYCP01106 439 aaPredicted RBP3.08□□□□□ -1.92
TRAJ41-201ENST00000390496 SMPD1P17405 629 aa3.08□□□□□ -1.92
TRAJ41-201ENST00000390496 WEE1P30291 646 aa3.08□□□□□ -1.92
TRAJ41-201ENST00000390496 ECM1Q16610 540 aa3.08□□□□□ -1.92
TRAJ41-201ENST00000390496 IFFO2Q5TF58 517 aa3.08□□□□□ -1.92
TRAJ41-201ENST00000390496 HINFPQ9BQA5 517 aa3.08□□□□□ -1.92
TRAJ41-201ENST00000390496 KLF16Q9BXK1 252 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms