RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 RBM27Q9P2N5 1060 aaKnown RBP4.28□□□□□ -1.72
TRAV39-201ENST00000390466 PEAK1Q9H792 1746 aa4.28□□□□□ -1.72
TRAV39-201ENST00000390466 MARF1Q9Y4F3 1742 aaKnown RBP4.28□□□□□ -1.72
TRAV39-201ENST00000390466 TOPAZ1Q8N9V7 1692 aa4.28□□□□□ -1.72
TRAV39-201ENST00000390466 CPSF1Q10570 1443 aaKnown RBP4.28□□□□□ -1.72
TRAV39-201ENST00000390466 NRXN3Q9Y4C0 1643 aa4.28□□□□□ -1.72
TRAV39-201ENST00000390466 RTL1A6NKG5 1358 aa4.27□□□□□ -1.73
TRAV39-201ENST00000390466 RPAP1Q9BWH6 1393 aaPredicted RBP4.27□□□□□ -1.73
TRAV39-201ENST00000390466 RIMS1Q86UR5 1692 aaKnown RBP4.27□□□□□ -1.73
TRAV39-201ENST00000390466 ZBTB7BO15156 539 aaPredicted RBP4.27□□□□□ -1.73
TRAV39-201ENST00000390466 SLC24A1O60721 1099 aa4.27□□□□□ -1.73
TRAV39-201ENST00000390466 CDC45O75419 566 aa4.27□□□□□ -1.73
TRAV39-201ENST00000390466 RABEP1Q15276 862 aa4.27□□□□□ -1.73
TRAV39-201ENST00000390466 CAVIN1Q6NZI2 390 aaKnown RBP4.27□□□□□ -1.73
TRAV39-201ENST00000390466 LRSAM1Q6UWE0 723 aa4.27□□□□□ -1.73
TRAV39-201ENST00000390466 PLEKHM2Q8IWE5 1019 aa4.27□□□□□ -1.73
TRAV39-201ENST00000390466 MRPL50Q8N5N7 158 aaKnown RBP4.27□□□□□ -1.73
TRAV39-201ENST00000390466 ANKRD7Q92527 254 aa4.27□□□□□ -1.73
TRAV39-201ENST00000390466 USP26Q9BXU7 913 aa4.27□□□□□ -1.73
TRAV39-201ENST00000390466 SLC12A5Q9H2X9 1139 aa4.27□□□□□ -1.73
TRAV39-201ENST00000390466 C14orf93Q9H972 538 aaKnown RBP4.27□□□□□ -1.73
TRAV39-201ENST00000390466 SMC4Q9NTJ3 1288 aa4.27□□□□□ -1.73
TRAV39-201ENST00000390466 NOB1Q9ULX3 412 aaKnown RBP4.27□□□□□ -1.73
TRAV39-201ENST00000390466 DDX49Q9Y6V7 483 aaKnown RBP4.27□□□□□ -1.73
TRAV39-201ENST00000390466 RICTORQ6R327 1708 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 DDX60Q8IY21 1712 aaKnown RBP4.26□□□□□ -1.73
TRAV39-201ENST00000390466 DLC1Q96QB1 1528 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 SALL3Q9BXA9 1300 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 BRD1O95696 1058 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 ZNF853P0CG23 659 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 MSNP26038 577 aaKnown RBP4.26□□□□□ -1.73
TRAV39-201ENST00000390466 GTF2E1P29083 439 aaPredicted RBP4.26□□□□□ -1.73
TRAV39-201ENST00000390466 NUCB2P80303 420 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 HMGN5P82970 282 aaKnown RBP4.26□□□□□ -1.73
TRAV39-201ENST00000390466 FKBP5Q13451 457 aaPredicted RBP4.26□□□□□ -1.73
TRAV39-201ENST00000390466 CUL4AQ13619 759 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 ATP2B3Q16720 1220 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 CSPP1Q1MSJ5 1256 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 TTC22Q5TAA0 569 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 MORC1Q86VD1 984 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 ITPRIPQ8IWB1 547 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 ZGPATQ8N5A5 531 aaKnown RBP4.26□□□□□ -1.73
TRAV39-201ENST00000390466 TMEM87AQ8NBN3 555 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 PIBF1Q8WXW3 757 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 FUCA2Q9BTY2 467 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 PRDM10Q9NQV6 1147 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 FAM13BQ9NYF5 915 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.26□□□□□ -1.73
TRAV39-201ENST00000390466 MED1Q15648 1581 aaPredicted RBP4.26□□□□□ -1.73
TRAV39-201ENST00000390466 DIP2CQ9Y2E4 1556 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 KIAA0232Q92628 1395 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 USP54Q70EL1 1684 aa4.26□□□□□ -1.73
TRAV39-201ENST00000390466 ERBB3P21860 1342 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 ATP7BP35670 1465 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 ZBTB22O15209 634 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 CTIFO43310 598 aaKnown RBP4.25□□□□□ -1.73
TRAV39-201ENST00000390466 FGD1P98174 961 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 MCTP1Q6DN14 999 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 SPATA31D1Q6ZQQ2 1576 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 FTSJ3Q8IY81 847 aaKnown RBP4.25□□□□□ -1.73
TRAV39-201ENST00000390466 OTUD7AQ8TE49 926 aaPredicted RBP4.25□□□□□ -1.73
TRAV39-201ENST00000390466 TSC1Q92574 1164 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 ARHGAP45Q92619 1136 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 GCC1Q96CN9 775 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 PRIMPOLQ96LW4 560 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 YTHDC2Q9H6S0 1430 aaKnown RBP4.25□□□□□ -1.73
TRAV39-201ENST00000390466 FOXD4L1Q9NU39 408 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 CCDC39Q9UFE4 941 aa4.25□□□□□ -1.73
TRAV39-201ENST00000390466 ZHX1Q9UKY1 873 aaPredicted RBP4.25□□□□□ -1.73
TRAV39-201ENST00000390466 SPAG9O60271 1321 aaKnown RBP4.24□□□□□ -1.73
TRAV39-201ENST00000390466 SSH2Q76I76 1423 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 RIMS2Q9UQ26 1411 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 SYCE3A1L190 88 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 AP5Z1O43299 807 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 VAMP4O75379 141 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 KIF20AO95235 890 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 NEUROD2Q15784 382 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 ZNF428Q96B54 188 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 GTPBP4Q9BZE4 634 aaKnown RBP4.24□□□□□ -1.73
TRAV39-201ENST00000390466 KCNF1Q9H3M0 494 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 DCTPP1Q9H773 170 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 BCL2L12Q9HB09 334 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 CWC22Q9HCG8 908 aaKnown RBP4.24□□□□□ -1.73
TRAV39-201ENST00000390466 FAM53CQ9NYF3 392 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 ATAD2Q6PL18 1390 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 ALKQ9UM73 1620 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 MLH3Q9UHC1 1453 aa4.24□□□□□ -1.73
TRAV39-201ENST00000390466 ECM29Q5VYK3 1845 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 POGZQ7Z3K3 1410 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 KDM3BQ7LBC6 1761 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 CPS1P31327 1500 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 GOLGA6L22H0YM25 854 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 MBD3O95983 291 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 KIAA2012Q0VF49 1180 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 UVSSAQ2YD98 709 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 PPP4R3BQ5MIZ7 849 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 EFCAB2Q5VUJ9 269 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 C17orf53Q8N3J3 647 aaPredicted RBP4.23□□□□□ -1.73
TRAV39-201ENST00000390466 TSPYL6Q8N831 410 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 CFAP53Q96M91 514 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms