RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 AKT1S1Q96B36 256 aa10.01□□□□□ -0.81
TRAV27-201ENST00000390457 COL24A1Q17RW2 1714 aa10□□□□□ -0.81
TRAV27-201ENST00000390457 IP6K1Q92551 441 aa10□□□□□ -0.81
TRAV27-201ENST00000390457 ARXQ96QS3 562 aa10□□□□□ -0.81
TRAV27-201ENST00000390457 A0A1W2PP64 1363 aa10□□□□□ -0.81
TRAV27-201ENST00000390457 CHD4Q14839 1912 aa9.99□□□□□ -0.81
TRAV27-201ENST00000390457 HDGFL2Q7Z4V5 671 aaPredicted RBP9.99□□□□□ -0.81
TRAV27-201ENST00000390457 TESK2Q96S53 571 aa9.99□□□□□ -0.81
TRAV27-201ENST00000390457 CARD11Q9BXL7 1154 aa9.99□□□□□ -0.81
TRAV27-201ENST00000390457 SLC27A3Q5K4L6 730 aa9.98□□□□□ -0.81
TRAV27-201ENST00000390457 TMC1Q8TDI8 760 aa9.98□□□□□ -0.81
TRAV27-201ENST00000390457 SLC16A10Q8TF71 515 aa9.98□□□□□ -0.81
TRAV27-201ENST00000390457 QSER1Q2KHR3 1735 aa9.98□□□□□ -0.81
TRAV27-201ENST00000390457 TERF2IPQ9NYB0 399 aa9.97□□□□□ -0.81
TRAV27-201ENST00000390457 MAP3K19Q56UN5 1328 aa9.97□□□□□ -0.81
TRAV27-201ENST00000390457 PNPLA7Q6ZV29 1317 aa9.97□□□□□ -0.81
TRAV27-201ENST00000390457 NSD2O96028 1365 aa9.97□□□□□ -0.81
TRAV27-201ENST00000390457 FAM208AQ9UK61 1670 aaKnown RBP9.96□□□□□ -0.81
TRAV27-201ENST00000390457 FBLN1P23142 703 aa9.95□□□□□ -0.82
TRAV27-201ENST00000390457 HOXC9P31274 260 aa9.95□□□□□ -0.82
TRAV27-201ENST00000390457 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
TRAV27-201ENST00000390457 DDX54Q8TDD1 881 aaKnown RBP9.95□□□□□ -0.82
TRAV27-201ENST00000390457 ANKRD36BQ8N2N9 1353 aa9.95□□□□□ -0.82
TRAV27-201ENST00000390457 SHANK3Q9BYB0 1731 aa9.95□□□□□ -0.82
TRAV27-201ENST00000390457 TUBGCP6Q96RT7 1819 aa9.94□□□□□ -0.82
TRAV27-201ENST00000390457 LY75O60449 1722 aa9.94□□□□□ -0.82
TRAV27-201ENST00000390457 MEGF6O75095 1541 aa9.94□□□□□ -0.82
TRAV27-201ENST00000390457 KCNQ4P56696 695 aa9.94□□□□□ -0.82
TRAV27-201ENST00000390457 LTV1Q96GA3 475 aaPredicted RBP9.94□□□□□ -0.82
TRAV27-201ENST00000390457 RGPD2P0DJD1 1756 aa9.93□□□□□ -0.82
TRAV27-201ENST00000390457 ST20-MTHFSA0A0A6YYL1 179 aa9.93□□□□□ -0.82
TRAV27-201ENST00000390457 C1QTNF8P60827 252 aa9.93□□□□□ -0.82
TRAV27-201ENST00000390457 NBPF6Q5VWK0 638 aa9.93□□□□□ -0.82
TRAV27-201ENST00000390457 ZCRB1Q8TBF4 217 aaKnown RBP9.93□□□□□ -0.82
TRAV27-201ENST00000390457 NBPF4Q96M43 638 aa9.93□□□□□ -0.82
TRAV27-201ENST00000390457 POLA2Q14181 598 aa9.92□□□□□ -0.82
TRAV27-201ENST00000390457 COG3Q96JB2 828 aa9.92□□□□□ -0.82
TRAV27-201ENST00000390457 TFCP2L1Q9NZI6 479 aa9.92□□□□□ -0.82
TRAV27-201ENST00000390457 RTL1A6NKG5 1358 aa9.91□□□□□ -0.82
TRAV27-201ENST00000390457 DOT1LQ8TEK3 1739 aa9.91□□□□□ -0.82
TRAV27-201ENST00000390457 FYB1O15117 783 aa9.91□□□□□ -0.82
TRAV27-201ENST00000390457 POLD1P28340 1107 aa9.91□□□□□ -0.82
TRAV27-201ENST00000390457 NLGN2Q8NFZ4 835 aa9.91□□□□□ -0.82
TRAV27-201ENST00000390457 CGNL1Q0VF96 1302 aa9.9□□□□□ -0.82
TRAV27-201ENST00000390457 AMPHP49418 695 aa9.9□□□□□ -0.82
TRAV27-201ENST00000390457 RRS1Q15050 365 aaKnown RBP9.9□□□□□ -0.82
TRAV27-201ENST00000390457 GPR162Q16538 588 aa9.9□□□□□ -0.82
TRAV27-201ENST00000390457 COL23A1Q86Y22 540 aaPredicted RBP9.9□□□□□ -0.82
TRAV27-201ENST00000390457 SYTL4Q96C24 671 aaPredicted RBP9.9□□□□□ -0.82
TRAV27-201ENST00000390457 TONSLQ96HA7 1378 aa9.89□□□□□ -0.83
TRAV27-201ENST00000390457 YBX3P16989 372 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRAV27-201ENST00000390457 CCNL1Q9UK58 526 aaPredicted RBP9.89□□□□□ -0.83
TRAV27-201ENST00000390457 USHBP1Q8N6Y0 703 aa9.88□□□□□ -0.83
TRAV27-201ENST00000390457 GGNBP2Q9H3C7 697 aa9.88□□□□□ -0.83
TRAV27-201ENST00000390457 INSRP06213 1382 aa9.88□□□□□ -0.83
TRAV27-201ENST00000390457 USP47Q96K76 1375 aa9.88□□□□□ -0.83
TRAV27-201ENST00000390457 SENP3-EIF4A1A0A087X0R7 540 aa9.87□□□□□ -0.83
TRAV27-201ENST00000390457 HAX1O00165 279 aa9.87□□□□□ -0.83
TRAV27-201ENST00000390457 CYP27B1O15528 508 aa9.87□□□□□ -0.83
TRAV27-201ENST00000390457 HSP90AB2PQ58FF8 381 aa9.87□□□□□ -0.83
TRAV27-201ENST00000390457 PIP4P2Q8N4L2 257 aa9.87□□□□□ -0.83
TRAV27-201ENST00000390457 NCAPD2Q15021 1401 aa9.87□□□□□ -0.83
TRAV27-201ENST00000390457 KIF24Q5T7B8 1368 aa9.87□□□□□ -0.83
TRAV27-201ENST00000390457 AMIGO3Q86WK7 504 aa9.86□□□□□ -0.83
TRAV27-201ENST00000390457 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
TRAV27-201ENST00000390457 RAPGEF4Q8WZA2 1011 aa9.86□□□□□ -0.83
TRAV27-201ENST00000390457 TAF1LQ8IZX4 1826 aa9.86□□□□□ -0.83
TRAV27-201ENST00000390457 GRIN3BO60391 1043 aa9.85□□□□□ -0.83
TRAV27-201ENST00000390457 TATP17735 454 aaPredicted RBP9.85□□□□□ -0.83
TRAV27-201ENST00000390457 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
TRAV27-201ENST00000390457 CARD14Q9BXL6 1004 aa9.85□□□□□ -0.83
TRAV27-201ENST00000390457 CD2APQ9Y5K6 639 aa9.85□□□□□ -0.83
TRAV27-201ENST00000390457 C5P01031 1676 aa9.85□□□□□ -0.83
TRAV27-201ENST00000390457 FLT4P35916 1363 aa9.85□□□□□ -0.83
TRAV27-201ENST00000390457 PALLDQ8WX93 1383 aa9.85□□□□□ -0.83
TRAV27-201ENST00000390457 PCDH11XQ9BZA7 1347 aa9.84□□□□□ -0.83
TRAV27-201ENST00000390457 PCDH11YQ9BZA8 1340 aa9.84□□□□□ -0.83
TRAV27-201ENST00000390457 GIGYF1O75420 1035 aaPredicted RBP9.84□□□□□ -0.83
TRAV27-201ENST00000390457 MSL1Q68DK7 614 aa9.84□□□□□ -0.83
TRAV27-201ENST00000390457 PELP1Q8IZL8 1130 aaKnown RBP9.84□□□□□ -0.83
TRAV27-201ENST00000390457 FLAD1Q8NFF5 587 aa9.84□□□□□ -0.83
TRAV27-201ENST00000390457 TOGARAM1Q9Y4F4 1720 aa9.84□□□□□ -0.83
TRAV27-201ENST00000390457 MAP2P11137 1827 aaKnown RBP9.84□□□□□ -0.83
TRAV27-201ENST00000390457 SMG6Q86US8 1419 aaKnown RBP9.83□□□□□ -0.84
TRAV27-201ENST00000390457 TMF1P82094 1093 aa9.83□□□□□ -0.84
TRAV27-201ENST00000390457 PIGBQ92521 554 aa9.83□□□□□ -0.84
TRAV27-201ENST00000390457 EMILIN1Q9Y6C2 1016 aa9.83□□□□□ -0.84
TRAV27-201ENST00000390457 ITGB4P16144 1822 aa9.83□□□□□ -0.84
TRAV27-201ENST00000390457 ADCY9O60503 1353 aa9.83□□□□□ -0.84
TRAV27-201ENST00000390457 UBR3Q6ZT12 1888 aa9.83□□□□□ -0.84
TRAV27-201ENST00000390457 PKD1L3Q7Z443 1732 aa9.82□□□□□ -0.84
TRAV27-201ENST00000390457 HMGB2P26583 209 aaKnown RBP9.82□□□□□ -0.84
TRAV27-201ENST00000390457 MPRIPQ6WCQ1 1025 aa9.82□□□□□ -0.84
TRAV27-201ENST00000390457 SMARCC1Q92922 1105 aaPredicted RBP9.82□□□□□ -0.84
TRAV27-201ENST00000390457 KIF20BQ96Q89 1820 aa9.82□□□□□ -0.84
TRAV27-201ENST00000390457 C4BP0C0L5 1744 aa9.82□□□□□ -0.84
TRAV27-201ENST00000390457 SMIM5Q71RC9 77 aa9.81□□□□□ -0.84
TRAV27-201ENST00000390457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRAV27-201ENST00000390457 ATP10DQ9P241 1426 aa9.81□□□□□ -0.84
TRAV27-201ENST00000390457 WASHC2AQ641Q2 1341 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms