RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
TRAV20-201ENST00000390448 KCNQ4P56696 695 aa12.55□□□□□ -0.4
TRAV20-201ENST00000390448 ANKRD36BQ8N2N9 1353 aa12.55□□□□□ -0.4
TRAV20-201ENST00000390448 FYB1O15117 783 aa12.54□□□□□ -0.4
TRAV20-201ENST00000390448 TATP17735 454 aaPredicted RBP12.54□□□□□ -0.4
TRAV20-201ENST00000390448 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
TRAV20-201ENST00000390448 USHBP1Q8N6Y0 703 aa12.54□□□□□ -0.4
TRAV20-201ENST00000390448 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
TRAV20-201ENST00000390448 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
TRAV20-201ENST00000390448 SGIP1Q9BQI5 828 aa12.54□□□□□ -0.4
TRAV20-201ENST00000390448 CCNL1Q9UK58 526 aaPredicted RBP12.54□□□□□ -0.4
TRAV20-201ENST00000390448 BTAF1O14981 1849 aa12.53□□□□□ -0.4
TRAV20-201ENST00000390448 HMGB2P26583 209 aaKnown RBP12.53□□□□□ -0.4
TRAV20-201ENST00000390448 CGNL1Q0VF96 1302 aa12.53□□□□□ -0.4
TRAV20-201ENST00000390448 USP47Q96K76 1375 aa12.53□□□□□ -0.4
TRAV20-201ENST00000390448 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
TRAV20-201ENST00000390448 TRIM26Q12899 539 aaPredicted RBP12.52□□□□□ -0.41
TRAV20-201ENST00000390448 ZNF784Q8NCA9 323 aaPredicted RBP12.52□□□□□ -0.41
TRAV20-201ENST00000390448 RTL1A6NKG5 1358 aa12.52□□□□□ -0.41
TRAV20-201ENST00000390448 HSP90AB2PQ58FF8 381 aa12.51□□□□□ -0.41
TRAV20-201ENST00000390448 PNPLA7Q6ZV29 1317 aa12.51□□□□□ -0.41
TRAV20-201ENST00000390448 FAM208AQ9UK61 1670 aaKnown RBP12.51□□□□□ -0.41
TRAV20-201ENST00000390448 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
TRAV20-201ENST00000390448 MPRIPQ6WCQ1 1025 aa12.5□□□□□ -0.41
TRAV20-201ENST00000390448 MEGF6O75095 1541 aa12.49□□□□□ -0.41
TRAV20-201ENST00000390448 MAP3K5Q99683 1374 aa12.49□□□□□ -0.41
TRAV20-201ENST00000390448 PCDH11XQ9BZA7 1347 aa12.49□□□□□ -0.41
TRAV20-201ENST00000390448 PCDH11YQ9BZA8 1340 aa12.49□□□□□ -0.41
TRAV20-201ENST00000390448 INSRP06213 1382 aa12.48□□□□□ -0.41
TRAV20-201ENST00000390448 FLT4P35916 1363 aa12.48□□□□□ -0.41
TRAV20-201ENST00000390448 POLR3GLQ9BT43 218 aa12.48□□□□□ -0.41
TRAV20-201ENST00000390448 PAPPAQ13219 1627 aa12.48□□□□□ -0.41
TRAV20-201ENST00000390448 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
TRAV20-201ENST00000390448 FLAD1Q8NFF5 587 aa12.47□□□□□ -0.41
TRAV20-201ENST00000390448 MSL1Q68DK7 614 aa12.46□□□□□ -0.41
TRAV20-201ENST00000390448 SMARCC1Q92922 1105 aaPredicted RBP12.46□□□□□ -0.41
TRAV20-201ENST00000390448 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
TRAV20-201ENST00000390448 NSD2O96028 1365 aa12.45□□□□□ -0.42
TRAV20-201ENST00000390448 KIF24Q5T7B8 1368 aa12.45□□□□□ -0.42
TRAV20-201ENST00000390448 GRIN3BO60391 1043 aa12.45□□□□□ -0.42
TRAV20-201ENST00000390448 NLGN2Q8NFZ4 835 aa12.45□□□□□ -0.42
TRAV20-201ENST00000390448 AK7Q96M32 723 aa12.45□□□□□ -0.42
TRAV20-201ENST00000390448 EMILIN1Q9Y6C2 1016 aa12.45□□□□□ -0.42
TRAV20-201ENST00000390448 DOT1LQ8TEK3 1739 aa12.45□□□□□ -0.42
TRAV20-201ENST00000390448 PALLDQ8WX93 1383 aa12.44□□□□□ -0.42
TRAV20-201ENST00000390448 RGPD2P0DJD1 1756 aa12.44□□□□□ -0.42
TRAV20-201ENST00000390448 CARD14Q9BXL6 1004 aa12.44□□□□□ -0.42
TRAV20-201ENST00000390448 NSD3Q9BZ95 1437 aa12.44□□□□□ -0.42
TRAV20-201ENST00000390448 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
TRAV20-201ENST00000390448 CYP27B1O15528 508 aa12.43□□□□□ -0.42
TRAV20-201ENST00000390448 PCGF6Q9BYE7 350 aa12.43□□□□□ -0.42
TRAV20-201ENST00000390448 TIMELESSQ9UNS1 1208 aa12.43□□□□□ -0.42
TRAV20-201ENST00000390448 GIGYF1O75420 1035 aaPredicted RBP12.42□□□□□ -0.42
TRAV20-201ENST00000390448 PHF14O94880 888 aa12.42□□□□□ -0.42
TRAV20-201ENST00000390448 TNNT2P45379 298 aaPredicted RBP12.42□□□□□ -0.42
TRAV20-201ENST00000390448 C1QTNF8P60827 252 aa12.42□□□□□ -0.42
TRAV20-201ENST00000390448 PIGBQ92521 554 aa12.41□□□□□ -0.42
TRAV20-201ENST00000390448 TMOD3Q9NYL9 352 aa12.41□□□□□ -0.42
TRAV20-201ENST00000390448 CHD4Q14839 1912 aa12.41□□□□□ -0.42
TRAV20-201ENST00000390448 WASHC2AQ641Q2 1341 aa12.4□□□□□ -0.42
TRAV20-201ENST00000390448 LY75O60449 1722 aa12.4□□□□□ -0.42
TRAV20-201ENST00000390448 EYA1Q99502 592 aa12.4□□□□□ -0.42
TRAV20-201ENST00000390448 CD2APQ9Y5K6 639 aa12.4□□□□□ -0.42
TRAV20-201ENST00000390448 QSER1Q2KHR3 1735 aa12.4□□□□□ -0.43
TRAV20-201ENST00000390448 YBX3P16989 372 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRAV20-201ENST00000390448 IFNL2Q8IZJ0 200 aa12.39□□□□□ -0.43
TRAV20-201ENST00000390448 SHANK3Q9BYB0 1731 aa12.39□□□□□ -0.43
TRAV20-201ENST00000390448 KIF20BQ96Q89 1820 aa12.39□□□□□ -0.43
TRAV20-201ENST00000390448 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.38□□□□□ -0.43
TRAV20-201ENST00000390448 LOC102724428A0A0B4J2F2 783 aa12.38□□□□□ -0.43
TRAV20-201ENST00000390448 ATP6V1AP38606 617 aa12.38□□□□□ -0.43
TRAV20-201ENST00000390448 SIK1P57059 783 aa12.38□□□□□ -0.43
TRAV20-201ENST00000390448 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
TRAV20-201ENST00000390448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAV20-201ENST00000390448 POLKQ9UBT6 870 aa12.38□□□□□ -0.43
TRAV20-201ENST00000390448 GNPATO15228 680 aa12.36□□□□□ -0.43
TRAV20-201ENST00000390448 PHKG2P15735 406 aa12.36□□□□□ -0.43
TRAV20-201ENST00000390448 SSFA2P28290 1259 aa12.36□□□□□ -0.43
TRAV20-201ENST00000390448 EIF4G2P78344 907 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRAV20-201ENST00000390448 SMIM5Q71RC9 77 aa12.36□□□□□ -0.43
TRAV20-201ENST00000390448 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
TRAV20-201ENST00000390448 ASAP1Q9ULH1 1129 aa12.36□□□□□ -0.43
TRAV20-201ENST00000390448 TUBGCP6Q96RT7 1819 aa12.36□□□□□ -0.43
TRAV20-201ENST00000390448 EIF4A2Q14240 407 aaKnown RBP12.35□□□□□ -0.43
TRAV20-201ENST00000390448 LINC00116Q8NCU8 138 aa12.35□□□□□ -0.43
TRAV20-201ENST00000390448 C5P01031 1676 aa12.35□□□□□ -0.43
TRAV20-201ENST00000390448 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
TRAV20-201ENST00000390448 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
TRAV20-201ENST00000390448 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
TRAV20-201ENST00000390448 PANK3Q9H999 370 aa12.34□□□□□ -0.43
TRAV20-201ENST00000390448 GPBP1L1Q9HC44 474 aaPredicted RBP12.34□□□□□ -0.43
TRAV20-201ENST00000390448 CLSPNQ9HAW4 1339 aa12.34□□□□□ -0.43
TRAV20-201ENST00000390448 TRAPPC3LQ5T215 181 aa12.33□□□□□ -0.44
TRAV20-201ENST00000390448 AMIGO3Q86WK7 504 aa12.33□□□□□ -0.44
TRAV20-201ENST00000390448 ZNF526Q8TF50 670 aaPredicted RBP12.33□□□□□ -0.44
TRAV20-201ENST00000390448 ATG3Q9NT62 314 aa12.33□□□□□ -0.44
TRAV20-201ENST00000390448 RTCBQ9Y3I0 505 aaKnown RBP12.33□□□□□ -0.44
TRAV20-201ENST00000390448 IGSF1Q8N6C5 1336 aa12.33□□□□□ -0.44
TRAV20-201ENST00000390448 C4BP0C0L5 1744 aa12.32□□□□□ -0.44
TRAV20-201ENST00000390448 COL24A1Q17RW2 1714 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms