RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 DPYSL4O14531 572 aa12.07□□□□□ -0.48
TRAV17-201ENST00000390445 RGPD1P0DJD0 1748 aa12.07□□□□□ -0.48
TRAV17-201ENST00000390445 NBR1Q14596 966 aa12.07□□□□□ -0.48
TRAV17-201ENST00000390445 NUTM2GQ5VZR2 741 aa12.07□□□□□ -0.48
TRAV17-201ENST00000390445 SEPT12Q8IYM1 358 aa12.07□□□□□ -0.48
TRAV17-201ENST00000390445 L3MBTL2Q969R5 705 aa12.07□□□□□ -0.48
TRAV17-201ENST00000390445 TNS1Q9HBL0 1735 aaKnown RBP12.07□□□□□ -0.48
TRAV17-201ENST00000390445 BTG4Q9NY30 223 aa12.07□□□□□ -0.48
TRAV17-201ENST00000390445 POLR3AO14802 1390 aaPredicted RBP12.06□□□□□ -0.48
TRAV17-201ENST00000390445 OXER1Q8TDS5 423 aa12.06□□□□□ -0.48
TRAV17-201ENST00000390445 PIK3C2AO00443 1686 aa12.06□□□□□ -0.48
TRAV17-201ENST00000390445 LMO7Q8WWI1 1683 aa12.06□□□□□ -0.48
TRAV17-201ENST00000390445 ACEP12821 1306 aa12.06□□□□□ -0.48
TRAV17-201ENST00000390445 PPIP5K1Q6PFW1 1433 aa12.05□□□□□ -0.48
TRAV17-201ENST00000390445 WNK3Q9BYP7 1800 aa12.05□□□□□ -0.48
TRAV17-201ENST00000390445 NEUROD1Q13562 356 aa12.05□□□□□ -0.48
TRAV17-201ENST00000390445 CENPJQ9HC77 1338 aaPredicted RBP12.05□□□□□ -0.48
TRAV17-201ENST00000390445 CHRNA2Q15822 529 aa12.04□□□□□ -0.48
TRAV17-201ENST00000390445 KIAA0232Q92628 1395 aa12.04□□□□□ -0.48
TRAV17-201ENST00000390445 A0A0G2JS52 829 aa12.03□□□□□ -0.48
TRAV17-201ENST00000390445 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
TRAV17-201ENST00000390445 MYT1Q01538 1121 aa12.03□□□□□ -0.48
TRAV17-201ENST00000390445 FAM98CQ17RN3 349 aaKnown RBP12.03□□□□□ -0.48
TRAV17-201ENST00000390445 NBPF8Q3BBV2 869 aa12.03□□□□□ -0.48
TRAV17-201ENST00000390445 PRDM11Q9NQV5 511 aa12.03□□□□□ -0.48
TRAV17-201ENST00000390445 MON2Q7Z3U7 1717 aa12.03□□□□□ -0.48
TRAV17-201ENST00000390445 BLMP54132 1417 aaPredicted RBP12.03□□□□□ -0.48
TRAV17-201ENST00000390445 COL18A1P39060 1754 aa12.02□□□□□ -0.48
TRAV17-201ENST00000390445 PLEKHG3A1L390 1219 aa12.02□□□□□ -0.49
TRAV17-201ENST00000390445 ONECUT3O60422 494 aaPredicted RBP12.02□□□□□ -0.49
TRAV17-201ENST00000390445 SLC34A2O95436 690 aa12.02□□□□□ -0.49
TRAV17-201ENST00000390445 HOXB3P14651 431 aaPredicted RBP12.02□□□□□ -0.49
TRAV17-201ENST00000390445 ZC3H6P61129 1189 aaKnown RBP12.02□□□□□ -0.49
TRAV17-201ENST00000390445 KRT27Q7Z3Y8 459 aa12.02□□□□□ -0.49
TRAV17-201ENST00000390445 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.49
TRAV17-201ENST00000390445 CAMTA1Q9Y6Y1 1673 aa12.02□□□□□ -0.49
TRAV17-201ENST00000390445 SBF2Q86WG5 1849 aa12.02□□□□□ -0.49
TRAV17-201ENST00000390445 FAM182BQ5T319 152 aa12.01□□□□□ -0.49
TRAV17-201ENST00000390445 PTCD2Q8WV60 388 aaKnown RBP12.01□□□□□ -0.49
TRAV17-201ENST00000390445 SPATA31A5Q5VU36 1347 aa12.01□□□□□ -0.49
TRAV17-201ENST00000390445 SPATA31A7Q8IWB4 1347 aa12.01□□□□□ -0.49
TRAV17-201ENST00000390445 SRCAPQ6ZRS2 3230 aa12.01□□□□□ -0.49
TRAV17-201ENST00000390445 LTN1O94822 1766 aa12□□□□□ -0.49
TRAV17-201ENST00000390445 SEMA3EO15041 775 aa12□□□□□ -0.49
TRAV17-201ENST00000390445 CCDC125Q86Z20 511 aa12□□□□□ -0.49
TRAV17-201ENST00000390445 ABTB2Q8N961 1025 aa12□□□□□ -0.49
TRAV17-201ENST00000390445 PARP4Q9UKK3 1724 aaKnown RBP12□□□□□ -0.49
TRAV17-201ENST00000390445 PDIA6Q15084 440 aa11.99□□□□□ -0.49
TRAV17-201ENST00000390445 STRN4Q9NRL3 753 aa11.99□□□□□ -0.49
TRAV17-201ENST00000390445 ROCK2O75116 1388 aaKnown RBP11.99□□□□□ -0.49
TRAV17-201ENST00000390445 KAT6BQ8WYB5 2073 aa11.98□□□□□ -0.49
TRAV17-201ENST00000390445 SLIT3O75094 1523 aa11.98□□□□□ -0.49
TRAV17-201ENST00000390445 USP6P35125 1406 aa11.98□□□□□ -0.49
TRAV17-201ENST00000390445 MAP3K9P80192 1104 aa11.98□□□□□ -0.49
TRAV17-201ENST00000390445 CABP1Q9NZU7 370 aa11.98□□□□□ -0.49
TRAV17-201ENST00000390445 SSH2Q76I76 1423 aa11.97□□□□□ -0.49
TRAV17-201ENST00000390445 USP19O94966 1318 aa11.97□□□□□ -0.49
TRAV17-201ENST00000390445 SPATA31A1Q5TZJ5 1347 aa11.97□□□□□ -0.49
TRAV17-201ENST00000390445 USP35Q9P2H5 1018 aa11.97□□□□□ -0.49
TRAV17-201ENST00000390445 PCDHGA4Q9Y5G9 962 aa11.96□□□□□ -0.49
TRAV17-201ENST00000390445 RREB1Q92766 1687 aa11.96□□□□□ -0.5
TRAV17-201ENST00000390445 LRRC37A3O60309 1634 aa11.96□□□□□ -0.5
TRAV17-201ENST00000390445 NUP188Q5SRE5 1749 aa11.95□□□□□ -0.5
TRAV17-201ENST00000390445 EVC2Q86UK5 1308 aa11.95□□□□□ -0.5
TRAV17-201ENST00000390445 USP54Q70EL1 1684 aa11.95□□□□□ -0.5
TRAV17-201ENST00000390445 SF3B2Q13435 895 aaKnown RBP11.95□□□□□ -0.5
TRAV17-201ENST00000390445 LARP1Q6PKG0 1096 aaKnown RBP11.95□□□□□ -0.5
TRAV17-201ENST00000390445 COL5A2P05997 1499 aaPredicted RBP11.95□□□□□ -0.5
TRAV17-201ENST00000390445 CPDO75976 1380 aa11.94□□□□□ -0.5
TRAV17-201ENST00000390445 ZBTB7CA1YPR0 619 aa11.94□□□□□ -0.5
TRAV17-201ENST00000390445 TESPA1A2RU30 521 aaPredicted RBP11.94□□□□□ -0.5
TRAV17-201ENST00000390445 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
TRAV17-201ENST00000390445 GCP02774 474 aa11.94□□□□□ -0.5
TRAV17-201ENST00000390445 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
TRAV17-201ENST00000390445 NLRP13Q86W25 1043 aa11.94□□□□□ -0.5
TRAV17-201ENST00000390445 EVA1CP58658 441 aa11.93□□□□□ -0.5
TRAV17-201ENST00000390445 PEAK1Q9H792 1746 aa11.93□□□□□ -0.5
TRAV17-201ENST00000390445 POTEMA6NI47 508 aa11.92□□□□□ -0.5
TRAV17-201ENST00000390445 MLLT3P42568 568 aaPredicted RBP11.92□□□□□ -0.5
TRAV17-201ENST00000390445 KHSRPQ92945 711 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRAV17-201ENST00000390445 LRP5O75197 1615 aa11.92□□□□□ -0.5
TRAV17-201ENST00000390445 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
TRAV17-201ENST00000390445 EVI5O60447 810 aa11.91□□□□□ -0.5
TRAV17-201ENST00000390445 BAG6P46379 1132 aa11.91□□□□□ -0.5
TRAV17-201ENST00000390445 EN1Q05925 392 aaPredicted RBP11.91□□□□□ -0.5
TRAV17-201ENST00000390445 BRD4O60885 1362 aaPredicted RBP11.91□□□□□ -0.5
TRAV17-201ENST00000390445 NFAT5O94916 1531 aa11.91□□□□□ -0.5
TRAV17-201ENST00000390445 TTC21BQ7Z4L5 1316 aa11.9□□□□□ -0.5
TRAV17-201ENST00000390445 CD163L1Q9NR16 1453 aa11.9□□□□□ -0.5
TRAV17-201ENST00000390445 PSDA5PKW4 1024 aaPredicted RBP11.9□□□□□ -0.5
TRAV17-201ENST00000390445 TBC1D12O60347 775 aa11.9□□□□□ -0.5
TRAV17-201ENST00000390445 CPSF1Q10570 1443 aaKnown RBP11.9□□□□□ -0.5
TRAV17-201ENST00000390445 ARSIQ5FYB1 569 aa11.9□□□□□ -0.5
TRAV17-201ENST00000390445 TONSLQ96HA7 1378 aa11.9□□□□□ -0.5
TRAV17-201ENST00000390445 CRB1P82279 1406 aa11.89□□□□□ -0.51
TRAV17-201ENST00000390445 TRIM37O94972 964 aa11.89□□□□□ -0.51
TRAV17-201ENST00000390445 GPR153Q6NV75 609 aa11.89□□□□□ -0.51
TRAV17-201ENST00000390445 POTEGQ6S5H5 508 aa11.89□□□□□ -0.51
TRAV17-201ENST00000390445 BARGINQ6ZT62 677 aa11.89□□□□□ -0.51
TRAV17-201ENST00000390445 TCP11L2Q8N4U5 519 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms