RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 COL3A1P02461 1466 aaPredicted RBP6.95□□□□□ -1.3
TRAV16-201ENST00000390444 LTN1O94822 1766 aa6.95□□□□□ -1.3
TRAV16-201ENST00000390444 PHRF1Q9P1Y6 1649 aaKnown RBP6.94□□□□□ -1.3
TRAV16-201ENST00000390444 ALS2Q96Q42 1657 aa6.93□□□□□ -1.3
TRAV16-201ENST00000390444 OVOS2A0A0J9YW53 1432 aa6.93□□□□□ -1.3
TRAV16-201ENST00000390444 OVOS2Q6IE36 1432 aa6.93□□□□□ -1.3
TRAV16-201ENST00000390444 CDK12Q9NYV4 1490 aaPredicted RBP6.93□□□□□ -1.3
TRAV16-201ENST00000390444 GPR37O15354 613 aa6.93□□□□□ -1.3
TRAV16-201ENST00000390444 NEUROD2Q15784 382 aa6.93□□□□□ -1.3
TRAV16-201ENST00000390444 RGPD1P0DJD0 1748 aa6.93□□□□□ -1.3
TRAV16-201ENST00000390444 CRYBG1Q9Y4K1 1723 aa6.93□□□□□ -1.3
TRAV16-201ENST00000390444 FYB1O15117 783 aa6.92□□□□□ -1.3
TRAV16-201ENST00000390444 POTEIP0CG38 1075 aa6.92□□□□□ -1.3
TRAV16-201ENST00000390444 HSPA2P54652 639 aa6.92□□□□□ -1.3
TRAV16-201ENST00000390444 CNGB1Q14028 1251 aaPredicted RBP6.92□□□□□ -1.3
TRAV16-201ENST00000390444 MORC1Q86VD1 984 aa6.92□□□□□ -1.3
TRAV16-201ENST00000390444 SP7Q8TDD2 431 aaPredicted RBP6.92□□□□□ -1.3
TRAV16-201ENST00000390444 ACEP12821 1306 aa6.92□□□□□ -1.3
TRAV16-201ENST00000390444 ZBED9Q6R2W3 1325 aa6.92□□□□□ -1.3
TRAV16-201ENST00000390444 TTC21AQ8NDW8 1320 aa6.92□□□□□ -1.3
TRAV16-201ENST00000390444 PEAK1Q9H792 1746 aa6.92□□□□□ -1.3
TRAV16-201ENST00000390444 AATKQ6ZMQ8 1374 aa6.92□□□□□ -1.3
TRAV16-201ENST00000390444 PTGER2P43116 358 aa6.91□□□□□ -1.3
TRAV16-201ENST00000390444 FAM9BQ8IZU0 186 aa6.91□□□□□ -1.3
TRAV16-201ENST00000390444 USP31Q70CQ4 1352 aa6.91□□□□□ -1.3
TRAV16-201ENST00000390444 PNPLA6Q8IY17 1366 aa6.91□□□□□ -1.3
TRAV16-201ENST00000390444 MST1RQ04912 1400 aa6.91□□□□□ -1.3
TRAV16-201ENST00000390444 C1orf167Q5SNV9 1468 aa6.91□□□□□ -1.3
TRAV16-201ENST00000390444 NHSL1Q5SYE7 1610 aa6.9□□□□□ -1.3
TRAV16-201ENST00000390444 GRXCR2A6NFK2 248 aa6.9□□□□□ -1.3
TRAV16-201ENST00000390444 HNRNPUQ00839 825 aaKnown RBP eCLIP6.9□□□□□ -1.3
TRAV16-201ENST00000390444 AK7Q96M32 723 aa6.9□□□□□ -1.3
TRAV16-201ENST00000390444 TTC21BQ7Z4L5 1316 aa6.9□□□□□ -1.3
TRAV16-201ENST00000390444 TMEM94Q12767 1356 aa6.9□□□□□ -1.31
TRAV16-201ENST00000390444 IQSEC2Q5JU85 1478 aa6.9□□□□□ -1.31
TRAV16-201ENST00000390444 DLG5Q8TDM6 1919 aa6.89□□□□□ -1.31
TRAV16-201ENST00000390444 TBC1D12O60347 775 aa6.89□□□□□ -1.31
TRAV16-201ENST00000390444 SLC34A2O95436 690 aa6.89□□□□□ -1.31
TRAV16-201ENST00000390444 PROSER2Q86WR7 435 aaPredicted RBP6.89□□□□□ -1.31
TRAV16-201ENST00000390444 PTCD2Q8WV60 388 aaKnown RBP6.89□□□□□ -1.31
TRAV16-201ENST00000390444 GGNBP2Q9H3C7 697 aa6.89□□□□□ -1.31
TRAV16-201ENST00000390444 C19orf44Q9H6X5 657 aa6.89□□□□□ -1.31
TRAV16-201ENST00000390444 SLIT3O75094 1523 aa6.89□□□□□ -1.31
TRAV16-201ENST00000390444 NFAT5O94916 1531 aa6.89□□□□□ -1.31
TRAV16-201ENST00000390444 MED1Q15648 1581 aaPredicted RBP6.89□□□□□ -1.31
TRAV16-201ENST00000390444 ABCA3Q99758 1704 aa6.89□□□□□ -1.31
TRAV16-201ENST00000390444 MSH6P52701 1360 aa6.88□□□□□ -1.31
TRAV16-201ENST00000390444 EVI5O60447 810 aa6.88□□□□□ -1.31
TRAV16-201ENST00000390444 OSBPP22059 807 aa6.88□□□□□ -1.31
TRAV16-201ENST00000390444 MTHFSP49914 203 aa6.88□□□□□ -1.31
TRAV16-201ENST00000390444 NME9Q86XW9 330 aa6.88□□□□□ -1.31
TRAV16-201ENST00000390444 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRAV16-201ENST00000390444 CFAP53Q96M91 514 aa6.88□□□□□ -1.31
TRAV16-201ENST00000390444 FAM208AQ9UK61 1670 aaKnown RBP6.87□□□□□ -1.31
TRAV16-201ENST00000390444 LTBP4Q8N2S1 1624 aa6.87□□□□□ -1.31
TRAV16-201ENST00000390444 KIF24Q5T7B8 1368 aa6.87□□□□□ -1.31
TRAV16-201ENST00000390444 NUTM2FA1L443 756 aa6.87□□□□□ -1.31
TRAV16-201ENST00000390444 WDR43Q15061 677 aaKnown RBP eCLIP6.87□□□□□ -1.31
TRAV16-201ENST00000390444 C14orf37Q86TY3 774 aa6.87□□□□□ -1.31
TRAV16-201ENST00000390444 KRI1Q8N9T8 703 aaKnown RBP6.87□□□□□ -1.31
TRAV16-201ENST00000390444 NGDNQ8NEJ9 315 aaKnown RBP6.87□□□□□ -1.31
TRAV16-201ENST00000390444 DDX12PQ92771 950 aa6.87□□□□□ -1.31
TRAV16-201ENST00000390444 COG3Q96JB2 828 aa6.87□□□□□ -1.31
TRAV16-201ENST00000390444 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.87□□□□□ -1.31
TRAV16-201ENST00000390444 CAMTA1Q9Y6Y1 1673 aa6.87□□□□□ -1.31
TRAV16-201ENST00000390444 ABCC6O95255 1503 aa6.86□□□□□ -1.31
TRAV16-201ENST00000390444 PXDNQ92626 1479 aa6.86□□□□□ -1.31
TRAV16-201ENST00000390444 VIRMAQ69YN4 1812 aaKnown RBP6.86□□□□□ -1.31
TRAV16-201ENST00000390444 TNNT2P45379 298 aaPredicted RBP6.86□□□□□ -1.31
TRAV16-201ENST00000390444 NGEFQ8N5V2 710 aa6.86□□□□□ -1.31
TRAV16-201ENST00000390444 PMFBP1Q8TBY8 1022 aa6.86□□□□□ -1.31
TRAV16-201ENST00000390444 ADAMTS8Q9UP79 889 aa6.86□□□□□ -1.31
TRAV16-201ENST00000390444 GTF3C3Q9Y5Q9 886 aa6.86□□□□□ -1.31
TRAV16-201ENST00000390444 RGPD5Q99666 1765 aa6.86□□□□□ -1.31
TRAV16-201ENST00000390444 RGPD2P0DJD1 1756 aa6.85□□□□□ -1.31
TRAV16-201ENST00000390444 RTL1A6NKG5 1358 aa6.85□□□□□ -1.31
TRAV16-201ENST00000390444 ZNF335Q9H4Z2 1342 aaPredicted RBP6.85□□□□□ -1.31
TRAV16-201ENST00000390444 ATF3P18847 181 aa6.85□□□□□ -1.31
TRAV16-201ENST00000390444 MAP2K5Q13163 448 aa6.85□□□□□ -1.31
TRAV16-201ENST00000390444 RBM33Q96EV2 1170 aaKnown RBP6.85□□□□□ -1.31
TRAV16-201ENST00000390444 POLKQ9UBT6 870 aa6.85□□□□□ -1.31
TRAV16-201ENST00000390444 COL18A1P39060 1754 aa6.85□□□□□ -1.31
TRAV16-201ENST00000390444 SBNO1A3KN83 1393 aa6.84□□□□□ -1.31
TRAV16-201ENST00000390444 FCHSD2O94868 740 aa6.84□□□□□ -1.31
TRAV16-201ENST00000390444 PDE3BQ13370 1112 aa6.84□□□□□ -1.31
TRAV16-201ENST00000390444 HIC1Q14526 733 aa6.84□□□□□ -1.31
TRAV16-201ENST00000390444 ESCO1Q5FWF5 840 aa6.84□□□□□ -1.31
TRAV16-201ENST00000390444 TNS3Q68CZ2 1445 aa6.84□□□□□ -1.32
TRAV16-201ENST00000390444 LMO7Q8WWI1 1683 aa6.84□□□□□ -1.32
TRAV16-201ENST00000390444 ROBO1Q9Y6N7 1651 aa6.84□□□□□ -1.32
TRAV16-201ENST00000390444 FLT4P35916 1363 aa6.83□□□□□ -1.32
TRAV16-201ENST00000390444 AHDC1Q5TGY3 1603 aaPredicted RBP6.83□□□□□ -1.32
TRAV16-201ENST00000390444 ZNF521Q96K83 1311 aa6.83□□□□□ -1.32
TRAV16-201ENST00000390444 TRIM66O15016 1216 aa6.83□□□□□ -1.32
TRAV16-201ENST00000390444 GNPATO15228 680 aa6.83□□□□□ -1.32
TRAV16-201ENST00000390444 DIAPH1O60610 1272 aaKnown RBP6.83□□□□□ -1.32
TRAV16-201ENST00000390444 CCDC102AQ96A19 550 aa6.83□□□□□ -1.32
TRAV16-201ENST00000390444 NUDCQ9Y266 331 aa6.83□□□□□ -1.32
TRAV16-201ENST00000390444 COL22A1Q8NFW1 1626 aaPredicted RBP6.83□□□□□ -1.32
TRAV16-201ENST00000390444 USP19O94966 1318 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms