RNA–Protein interactions for RNA: ENST00000390435.1

TRAV8-3-201, Transcript of T cell receptor alpha variable 8-3, humanhuman

APPRIS P1 BASIC

Gene TRAV8-3, Length 341 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3-201ENST00000390435 C1orf141Q5JVX7 400 aa10.09□□□□□ -0.79
TRAV8-3-201ENST00000390435 MIER1Q8N108 512 aa10.09□□□□□ -0.79
TRAV8-3-201ENST00000390435 PKD1L3Q7Z443 1732 aa10.09□□□□□ -0.79
TRAV8-3-201ENST00000390435 KDRP35968 1356 aa10.09□□□□□ -0.79
TRAV8-3-201ENST00000390435 THSD7AQ9UPZ6 1657 aa10.09□□□□□ -0.79
TRAV8-3-201ENST00000390435 PCDH11XQ9BZA7 1347 aa10.08□□□□□ -0.8
TRAV8-3-201ENST00000390435 PCDH11YQ9BZA8 1340 aa10.08□□□□□ -0.8
TRAV8-3-201ENST00000390435 OVOS2A0A0G2JMS6 1433 aa10.08□□□□□ -0.8
TRAV8-3-201ENST00000390435 TNS2Q63HR2 1409 aa10.08□□□□□ -0.8
TRAV8-3-201ENST00000390435 LRRC37A3O60309 1634 aa10.08□□□□□ -0.8
TRAV8-3-201ENST00000390435 PRKAR2BP31323 418 aa10.08□□□□□ -0.8
TRAV8-3-201ENST00000390435 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
TRAV8-3-201ENST00000390435 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
TRAV8-3-201ENST00000390435 FAM9BQ8IZU0 186 aa10.08□□□□□ -0.8
TRAV8-3-201ENST00000390435 GAS2L2Q8NHY3 880 aa10.08□□□□□ -0.8
TRAV8-3-201ENST00000390435 ZCRB1Q8TBF4 217 aaKnown RBP10.08□□□□□ -0.8
TRAV8-3-201ENST00000390435 MEGF6O75095 1541 aa10.07□□□□□ -0.8
TRAV8-3-201ENST00000390435 BRWD3Q6RI45 1802 aa10.07□□□□□ -0.8
TRAV8-3-201ENST00000390435 HSP90AB1P08238 724 aaKnown RBP10.07□□□□□ -0.8
TRAV8-3-201ENST00000390435 AEBP1Q8IUX7 1158 aa10.07□□□□□ -0.8
TRAV8-3-201ENST00000390435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRAV8-3-201ENST00000390435 RGS17Q9UGC6 210 aaPredicted RBP10.07□□□□□ -0.8
TRAV8-3-201ENST00000390435 DISP2A7MBM2 1401 aa10.07□□□□□ -0.8
TRAV8-3-201ENST00000390435 VIRMAQ69YN4 1812 aaKnown RBP10.06□□□□□ -0.8
TRAV8-3-201ENST00000390435 ZNF530Q6P9A1 599 aaPredicted RBP10.06□□□□□ -0.8
TRAV8-3-201ENST00000390435 RUNDC1Q96C34 613 aa10.06□□□□□ -0.8
TRAV8-3-201ENST00000390435 RSPH6AQ9H0K4 717 aa10.06□□□□□ -0.8
TRAV8-3-201ENST00000390435 LMOD3Q0VAK6 560 aa10.05□□□□□ -0.8
TRAV8-3-201ENST00000390435 KRT27Q7Z3Y8 459 aa10.05□□□□□ -0.8
TRAV8-3-201ENST00000390435 IFNL2Q8IZJ0 200 aa10.05□□□□□ -0.8
TRAV8-3-201ENST00000390435 DDX54Q8TDD1 881 aaKnown RBP10.05□□□□□ -0.8
TRAV8-3-201ENST00000390435 PNISRQ8TF01 805 aaKnown RBP10.05□□□□□ -0.8
TRAV8-3-201ENST00000390435 RTF1Q92541 710 aaKnown RBP10.05□□□□□ -0.8
TRAV8-3-201ENST00000390435 ADAMTS8Q9UP79 889 aa10.05□□□□□ -0.8
TRAV8-3-201ENST00000390435 RGS12O14924 1447 aa10.05□□□□□ -0.8
TRAV8-3-201ENST00000390435 DLG5Q8TDM6 1919 aa10.04□□□□□ -0.8
TRAV8-3-201ENST00000390435 ONECUT3O60422 494 aaPredicted RBP10.04□□□□□ -0.8
TRAV8-3-201ENST00000390435 CCDC184Q52MB2 194 aa10.04□□□□□ -0.8
TRAV8-3-201ENST00000390435 AKAP4Q5JQC9 854 aa10.04□□□□□ -0.8
TRAV8-3-201ENST00000390435 SHANK3Q9BYB0 1731 aa10.04□□□□□ -0.8
TRAV8-3-201ENST00000390435 CCDC146Q8IYE0 955 aa10.03□□□□□ -0.8
TRAV8-3-201ENST00000390435 MAP3K5Q99683 1374 aa10.02□□□□□ -0.8
TRAV8-3-201ENST00000390435 GNAT3A8MTJ3 354 aa10.02□□□□□ -0.81
TRAV8-3-201ENST00000390435 NFE2L2Q16236 605 aa10.02□□□□□ -0.81
TRAV8-3-201ENST00000390435 DOT1LQ8TEK3 1739 aa10.02□□□□□ -0.81
TRAV8-3-201ENST00000390435 SCN11AQ9UI33 1791 aa10.01□□□□□ -0.81
TRAV8-3-201ENST00000390435 PHKG2P15735 406 aa10.01□□□□□ -0.81
TRAV8-3-201ENST00000390435 SF3B2Q13435 895 aaKnown RBP10.01□□□□□ -0.81
TRAV8-3-201ENST00000390435 NEUROD2Q15784 382 aa10.01□□□□□ -0.81
TRAV8-3-201ENST00000390435 MTHFSDQ2M296 383 aaKnown RBP10.01□□□□□ -0.81
TRAV8-3-201ENST00000390435 FAM196AQ6ZSG2 479 aa10.01□□□□□ -0.81
TRAV8-3-201ENST00000390435 NGEFQ8N5V2 710 aa10.01□□□□□ -0.81
TRAV8-3-201ENST00000390435 HTATSF1O43719 755 aaKnown RBP10□□□□□ -0.81
TRAV8-3-201ENST00000390435 RIPK4P57078 832 aa10□□□□□ -0.81
TRAV8-3-201ENST00000390435 CALD1Q05682 793 aaKnown RBP10□□□□□ -0.81
TRAV8-3-201ENST00000390435 TEFQ10587 303 aa10□□□□□ -0.81
TRAV8-3-201ENST00000390435 SYTL4Q96C24 671 aaPredicted RBP10□□□□□ -0.81
TRAV8-3-201ENST00000390435 DCAF5Q96JK2 942 aa10□□□□□ -0.81
TRAV8-3-201ENST00000390435 PLEKHF1Q96S99 279 aa10□□□□□ -0.81
TRAV8-3-201ENST00000390435 ITGB4P16144 1822 aa10□□□□□ -0.81
TRAV8-3-201ENST00000390435 SBF2Q86WG5 1849 aa10□□□□□ -0.81
TRAV8-3-201ENST00000390435 APAF1O14727 1248 aa9.99□□□□□ -0.81
TRAV8-3-201ENST00000390435 TMPOP42166 694 aaKnown RBP9.99□□□□□ -0.81
TRAV8-3-201ENST00000390435 PHACTR3Q96KR7 559 aa9.99□□□□□ -0.81
TRAV8-3-201ENST00000390435 CYP27B1O15528 508 aa9.98□□□□□ -0.81
TRAV8-3-201ENST00000390435 CABP4P57796 275 aa9.98□□□□□ -0.81
TRAV8-3-201ENST00000390435 MARCH10Q8NA82 808 aaPredicted RBP9.98□□□□□ -0.81
TRAV8-3-201ENST00000390435 TMOD3Q9NYL9 352 aa9.98□□□□□ -0.81
TRAV8-3-201ENST00000390435 NHSQ6T4R5 1651 aa9.98□□□□□ -0.81
TRAV8-3-201ENST00000390435 ERVV-2B6SEH9 535 aa9.97□□□□□ -0.81
TRAV8-3-201ENST00000390435 NKX1-1Q15270 411 aaPredicted RBP9.97□□□□□ -0.81
TRAV8-3-201ENST00000390435 MPRIPQ6WCQ1 1025 aa9.97□□□□□ -0.81
TRAV8-3-201ENST00000390435 ACSBG1Q96GR2 724 aa9.97□□□□□ -0.81
TRAV8-3-201ENST00000390435 RRP7AQ9Y3A4 280 aaKnown RBP9.97□□□□□ -0.81
TRAV8-3-201ENST00000390435 BCL9O00512 1426 aa9.97□□□□□ -0.81
TRAV8-3-201ENST00000390435 RNMTO43148 476 aaKnown RBP9.96□□□□□ -0.82
TRAV8-3-201ENST00000390435 HNRNPUQ00839 825 aaKnown RBP eCLIP9.96□□□□□ -0.82
TRAV8-3-201ENST00000390435 NCBP3Q53F19 620 aaKnown RBP9.96□□□□□ -0.82
TRAV8-3-201ENST00000390435 FAM182BQ5T319 152 aa9.96□□□□□ -0.82
TRAV8-3-201ENST00000390435 TOGARAM1Q9Y4F4 1720 aa9.96□□□□□ -0.82
TRAV8-3-201ENST00000390435 BTAF1O14981 1849 aa9.96□□□□□ -0.82
TRAV8-3-201ENST00000390435 HMGB2P26583 209 aaKnown RBP9.95□□□□□ -0.82
TRAV8-3-201ENST00000390435 TTC5Q8N0Z6 440 aa9.95□□□□□ -0.82
TRAV8-3-201ENST00000390435 SALL2Q9Y467 1007 aaPredicted RBP9.95□□□□□ -0.82
TRAV8-3-201ENST00000390435 ADAMTS7Q9UKP4 1686 aa9.95□□□□□ -0.82
TRAV8-3-201ENST00000390435 MRC1P22897 1456 aa9.94□□□□□ -0.82
TRAV8-3-201ENST00000390435 KDM6AO15550 1401 aaPredicted RBP9.94□□□□□ -0.82
TRAV8-3-201ENST00000390435 PRIM1P49642 420 aaKnown RBP9.94□□□□□ -0.82
TRAV8-3-201ENST00000390435 CCDC27Q2M243 656 aa9.94□□□□□ -0.82
TRAV8-3-201ENST00000390435 MCM10Q7L590 875 aa9.94□□□□□ -0.82
TRAV8-3-201ENST00000390435 CCDC125Q86Z20 511 aa9.94□□□□□ -0.82
TRAV8-3-201ENST00000390435 SMARCC1Q92922 1105 aaPredicted RBP9.94□□□□□ -0.82
TRAV8-3-201ENST00000390435 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
TRAV8-3-201ENST00000390435 SLC52A2Q9HAB3 445 aa9.94□□□□□ -0.82
TRAV8-3-201ENST00000390435 LAS1LQ9Y4W2 734 aaKnown RBP9.94□□□□□ -0.82
TRAV8-3-201ENST00000390435 SIPA1L3O60292 1781 aaPredicted RBP9.93□□□□□ -0.82
TRAV8-3-201ENST00000390435 TRIM37O94972 964 aa9.93□□□□□ -0.82
TRAV8-3-201ENST00000390435 BAG6P46379 1132 aa9.93□□□□□ -0.82
TRAV8-3-201ENST00000390435 TNS1Q9HBL0 1735 aaKnown RBP9.93□□□□□ -0.82
TRAV8-3-201ENST00000390435 CEMIPQ8WUJ3 1361 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms