RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 TATP17735 454 aaPredicted RBP12.24□□□□□ -0.45
TRBV27-201ENST00000390399 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
TRBV27-201ENST00000390399 ACSBG1Q96GR2 724 aa12.24□□□□□ -0.45
TRBV27-201ENST00000390399 DOT1LQ8TEK3 1739 aa12.23□□□□□ -0.45
TRBV27-201ENST00000390399 PLSCR1O15162 318 aa12.23□□□□□ -0.45
TRBV27-201ENST00000390399 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
TRBV27-201ENST00000390399 ZCRB1Q8TBF4 217 aaKnown RBP12.23□□□□□ -0.45
TRBV27-201ENST00000390399 KCNQ2O43526 872 aa12.22□□□□□ -0.45
TRBV27-201ENST00000390399 R3HDM1Q15032 1099 aaKnown RBP12.22□□□□□ -0.45
TRBV27-201ENST00000390399 BTAF1O14981 1849 aa12.21□□□□□ -0.45
TRBV27-201ENST00000390399 PKD1L3Q7Z443 1732 aa12.21□□□□□ -0.45
TRBV27-201ENST00000390399 EIF4A2Q14240 407 aaKnown RBP12.21□□□□□ -0.45
TRBV27-201ENST00000390399 NBPF14Q5TI25 921 aa12.21□□□□□ -0.45
TRBV27-201ENST00000390399 EYA1Q99502 592 aa12.21□□□□□ -0.45
TRBV27-201ENST00000390399 PCDH11XQ9BZA7 1347 aa12.2□□□□□ -0.46
TRBV27-201ENST00000390399 PCDH11YQ9BZA8 1340 aa12.2□□□□□ -0.46
TRBV27-201ENST00000390399 LRP5O75197 1615 aa12.19□□□□□ -0.46
TRBV27-201ENST00000390399 PER1O15534 1290 aaPredicted RBP12.19□□□□□ -0.46
TRBV27-201ENST00000390399 CC2D1BQ5T0F9 858 aaKnown RBP12.19□□□□□ -0.46
TRBV27-201ENST00000390399 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
TRBV27-201ENST00000390399 SYTL4Q96C24 671 aaPredicted RBP12.18□□□□□ -0.46
TRBV27-201ENST00000390399 NPC1L1Q9UHC9 1359 aa12.18□□□□□ -0.46
TRBV27-201ENST00000390399 IGSF1Q8N6C5 1336 aa12.17□□□□□ -0.46
TRBV27-201ENST00000390399 PRIM1P49642 420 aaKnown RBP12.17□□□□□ -0.46
TRBV27-201ENST00000390399 PROM2Q8N271 834 aa12.17□□□□□ -0.46
TRBV27-201ENST00000390399 SPG7Q9UQ90 795 aa12.17□□□□□ -0.46
TRBV27-201ENST00000390399 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
TRBV27-201ENST00000390399 ANO8Q9HCE9 1232 aaPredicted RBP12.16□□□□□ -0.46
TRBV27-201ENST00000390399 PLEKHG2Q9H7P9 1386 aa12.16□□□□□ -0.46
TRBV27-201ENST00000390399 TOGARAM1Q9Y4F4 1720 aa12.15□□□□□ -0.46
TRBV27-201ENST00000390399 CYP27B1O15528 508 aa12.15□□□□□ -0.46
TRBV27-201ENST00000390399 PAPPAQ13219 1627 aa12.15□□□□□ -0.47
TRBV27-201ENST00000390399 KAT6BQ8WYB5 2073 aa12.14□□□□□ -0.47
TRBV27-201ENST00000390399 MTHFSP49914 203 aa12.14□□□□□ -0.47
TRBV27-201ENST00000390399 STK32BQ9NY57 414 aa12.14□□□□□ -0.47
TRBV27-201ENST00000390399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
TRBV27-201ENST00000390399 LY75O60449 1722 aa12.14□□□□□ -0.47
TRBV27-201ENST00000390399 IL13P35225 146 aa12.13□□□□□ -0.47
TRBV27-201ENST00000390399 CASZ1Q86V15 1759 aa12.13□□□□□ -0.47
TRBV27-201ENST00000390399 AEBP1Q8IUX7 1158 aa12.12□□□□□ -0.47
TRBV27-201ENST00000390399 IFNL2Q8IZJ0 200 aa12.12□□□□□ -0.47
TRBV27-201ENST00000390399 SRCAPQ6ZRS2 3230 aa12.12□□□□□ -0.47
TRBV27-201ENST00000390399 ITGB4P16144 1822 aa12.11□□□□□ -0.47
TRBV27-201ENST00000390399 PHKG2P15735 406 aa12.11□□□□□ -0.47
TRBV27-201ENST00000390399 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
TRBV27-201ENST00000390399 SLC15A2Q16348 729 aa12.11□□□□□ -0.47
TRBV27-201ENST00000390399 SLC27A3Q5K4L6 730 aa12.11□□□□□ -0.47
TRBV27-201ENST00000390399 SULT6B1Q6IMI4 303 aa12.11□□□□□ -0.47
TRBV27-201ENST00000390399 LRRC4BQ9NT99 713 aa12.11□□□□□ -0.47
TRBV27-201ENST00000390399 KDRP35968 1356 aa12.1□□□□□ -0.47
TRBV27-201ENST00000390399 PLEKHO1Q53GL0 409 aaPredicted RBP12.1□□□□□ -0.47
TRBV27-201ENST00000390399 MPRIPQ6WCQ1 1025 aa12.1□□□□□ -0.47
TRBV27-201ENST00000390399 COL3A1P02461 1466 aaPredicted RBP12.09□□□□□ -0.47
TRBV27-201ENST00000390399 PALLDQ8WX93 1383 aa12.09□□□□□ -0.47
TRBV27-201ENST00000390399 DIAPH1O60610 1272 aaKnown RBP12.09□□□□□ -0.47
TRBV27-201ENST00000390399 AMOTQ4VCS5 1084 aa12.09□□□□□ -0.47
TRBV27-201ENST00000390399 ZNF530Q6P9A1 599 aaPredicted RBP12.09□□□□□ -0.47
TRBV27-201ENST00000390399 CCNL1Q9UK58 526 aaPredicted RBP12.09□□□□□ -0.47
TRBV27-201ENST00000390399 KCNQ4P56696 695 aa12.08□□□□□ -0.48
TRBV27-201ENST00000390399 ZNF827Q17R98 1081 aa12.08□□□□□ -0.48
TRBV27-201ENST00000390399 SPON1Q9HCB6 807 aa12.08□□□□□ -0.48
TRBV27-201ENST00000390399 HSP90AB1P08238 724 aaKnown RBP12.07□□□□□ -0.48
TRBV27-201ENST00000390399 HMOX1P09601 288 aa12.07□□□□□ -0.48
TRBV27-201ENST00000390399 QSER1Q2KHR3 1735 aa12.07□□□□□ -0.48
TRBV27-201ENST00000390399 C1orf141Q5JVX7 400 aa12.07□□□□□ -0.48
TRBV27-201ENST00000390399 PIGBQ92521 554 aa12.07□□□□□ -0.48
TRBV27-201ENST00000390399 SMARCC1Q92922 1105 aaPredicted RBP12.07□□□□□ -0.48
TRBV27-201ENST00000390399 PDGFDQ9GZP0 370 aaPredicted RBP12.07□□□□□ -0.48
TRBV27-201ENST00000390399 TMOD3Q9NYL9 352 aa12.07□□□□□ -0.48
TRBV27-201ENST00000390399 C5P01031 1676 aa12.06□□□□□ -0.48
TRBV27-201ENST00000390399 KDM6AO15550 1401 aaPredicted RBP12.06□□□□□ -0.48
TRBV27-201ENST00000390399 AKT1S1Q96B36 256 aa12.06□□□□□ -0.48
TRBV27-201ENST00000390399 DCAF5Q96JK2 942 aa12.06□□□□□ -0.48
TRBV27-201ENST00000390399 CFAP53Q96M91 514 aa12.06□□□□□ -0.48
TRBV27-201ENST00000390399 TUBGCP6Q96RT7 1819 aa12.06□□□□□ -0.48
TRBV27-201ENST00000390399 U2SURPO15042 1029 aaKnown RBP12.05□□□□□ -0.48
TRBV27-201ENST00000390399 ZBTB7AO95365 584 aa12.05□□□□□ -0.48
TRBV27-201ENST00000390399 ERVV-2B6SEH9 535 aa12.04□□□□□ -0.48
TRBV27-201ENST00000390399 PPP2R1AP30153 589 aa12.04□□□□□ -0.48
TRBV27-201ENST00000390399 TFCP2L1Q9NZI6 479 aa12.04□□□□□ -0.48
TRBV27-201ENST00000390399 PPP1R1BQ9UD71 204 aaPredicted RBP12.04□□□□□ -0.48
TRBV27-201ENST00000390399 TAF1LQ8IZX4 1826 aa12.04□□□□□ -0.48
TRBV27-201ENST00000390399 HMGB2P26583 209 aaKnown RBP12.03□□□□□ -0.48
TRBV27-201ENST00000390399 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
TRBV27-201ENST00000390399 ASAP1Q9ULH1 1129 aa12.03□□□□□ -0.48
TRBV27-201ENST00000390399 PNPLA7Q6ZV29 1317 aa12.03□□□□□ -0.48
TRBV27-201ENST00000390399 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
TRBV27-201ENST00000390399 SCN11AQ9UI33 1791 aa12.02□□□□□ -0.48
TRBV27-201ENST00000390399 CABP4P57796 275 aa12.02□□□□□ -0.49
TRBV27-201ENST00000390399 MTFR1LQ9H019 292 aa12.02□□□□□ -0.49
TRBV27-201ENST00000390399 ATG3Q9NT62 314 aa12.02□□□□□ -0.49
TRBV27-201ENST00000390399 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
TRBV27-201ENST00000390399 LOC102724428A0A0B4J2F2 783 aa12.01□□□□□ -0.49
TRBV27-201ENST00000390399 SIK1P57059 783 aa12.01□□□□□ -0.49
TRBV27-201ENST00000390399 NUDCQ9Y266 331 aa12.01□□□□□ -0.49
TRBV27-201ENST00000390399 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
TRBV27-201ENST00000390399 PTGER2P43116 358 aa12□□□□□ -0.49
TRBV27-201ENST00000390399 MTHFSDQ2M296 383 aaKnown RBP12□□□□□ -0.49
TRBV27-201ENST00000390399 AK7Q96M32 723 aa12□□□□□ -0.49
TRBV27-201ENST00000390399 MRC1P22897 1456 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms