RNA–Protein interactions for RNA: ENST00000390372.3

TRBV5-5-201, Transcript of T cell receptor beta variable 5-5, humanhuman

APPRIS P1 BASIC

Gene TRBV5-5, Length 350 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5-201ENST00000390372 RGPD2P0DJD1 1756 aa14.86□□□□□ -0.03
TRBV5-5-201ENST00000390372 NBPF14Q5TI25 921 aa14.86□□□□□ -0.03
TRBV5-5-201ENST00000390372 SPG7Q9UQ90 795 aa14.86□□□□□ -0.03
TRBV5-5-201ENST00000390372 PCDH11XQ9BZA7 1347 aa14.86□□□□□ -0.03
TRBV5-5-201ENST00000390372 PCDH11YQ9BZA8 1340 aa14.86□□□□□ -0.03
TRBV5-5-201ENST00000390372 ACSBG1Q96GR2 724 aa14.85□□□□□ -0.03
TRBV5-5-201ENST00000390372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.84□□□□□ -0.03
TRBV5-5-201ENST00000390372 NCAPD2Q15021 1401 aa14.83□□□□□ -0.03
TRBV5-5-201ENST00000390372 SBF2Q86WG5 1849 aa14.83□□□□□ -0.04
TRBV5-5-201ENST00000390372 KCNQ2O43526 872 aa14.83□□□□□ -0.04
TRBV5-5-201ENST00000390372 MTHFSP49914 203 aa14.83□□□□□ -0.04
TRBV5-5-201ENST00000390372 CNGB1Q14028 1251 aaPredicted RBP14.83□□□□□ -0.04
TRBV5-5-201ENST00000390372 PLEKHG2Q9H7P9 1386 aa14.83□□□□□ -0.04
TRBV5-5-201ENST00000390372 NHSQ6T4R5 1651 aa14.82□□□□□ -0.04
TRBV5-5-201ENST00000390372 SYTL4Q96C24 671 aaPredicted RBP14.82□□□□□ -0.04
TRBV5-5-201ENST00000390372 IGSF1Q8N6C5 1336 aa14.82□□□□□ -0.04
TRBV5-5-201ENST00000390372 PTF1AQ7RTS3 328 aa14.81□□□□□ -0.04
TRBV5-5-201ENST00000390372 RGPD3A6NKT7 1758 aaPredicted RBP14.8□□□□□ -0.04
TRBV5-5-201ENST00000390372 RGPD4Q7Z3J3 1758 aa14.8□□□□□ -0.04
TRBV5-5-201ENST00000390372 PRIM1P49642 420 aaKnown RBP14.8□□□□□ -0.04
TRBV5-5-201ENST00000390372 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
TRBV5-5-201ENST00000390372 IL13P35225 146 aa14.79□□□□□ -0.04
TRBV5-5-201ENST00000390372 R3HDM1Q15032 1099 aaKnown RBP14.79□□□□□ -0.04
TRBV5-5-201ENST00000390372 TXNRD1Q16881 649 aa14.79□□□□□ -0.04
TRBV5-5-201ENST00000390372 AMOTQ4VCS5 1084 aa14.79□□□□□ -0.04
TRBV5-5-201ENST00000390372 PLEKHO1Q53GL0 409 aaPredicted RBP14.79□□□□□ -0.04
TRBV5-5-201ENST00000390372 CFAP53Q96M91 514 aa14.79□□□□□ -0.04
TRBV5-5-201ENST00000390372 RREB1Q92766 1687 aa14.78□□□□□ -0.04
TRBV5-5-201ENST00000390372 PSDA5PKW4 1024 aaPredicted RBP14.78□□□□□ -0.04
TRBV5-5-201ENST00000390372 CYP27B1O15528 508 aa14.78□□□□□ -0.04
TRBV5-5-201ENST00000390372 HMGB2P26583 209 aaKnown RBP14.78□□□□□ -0.04
TRBV5-5-201ENST00000390372 IFNL2Q8IZJ0 200 aa14.78□□□□□ -0.04
TRBV5-5-201ENST00000390372 NKX1-1Q15270 411 aaPredicted RBP14.77□□□□□ -0.05
TRBV5-5-201ENST00000390372 SULT6B1Q6IMI4 303 aa14.77□□□□□ -0.05
TRBV5-5-201ENST00000390372 PKD1L3Q7Z443 1732 aa14.76□□□□□ -0.05
TRBV5-5-201ENST00000390372 SHANK3Q9BYB0 1731 aa14.76□□□□□ -0.05
TRBV5-5-201ENST00000390372 HSP90AB1P08238 724 aaKnown RBP14.76□□□□□ -0.05
TRBV5-5-201ENST00000390372 SLC27A3Q5K4L6 730 aa14.76□□□□□ -0.05
TRBV5-5-201ENST00000390372 NUP188Q5SRE5 1749 aa14.75□□□□□ -0.05
TRBV5-5-201ENST00000390372 PHKG2P15735 406 aa14.75□□□□□ -0.05
TRBV5-5-201ENST00000390372 PROM2Q8N271 834 aa14.75□□□□□ -0.05
TRBV5-5-201ENST00000390372 STK32BQ9NY57 414 aa14.75□□□□□ -0.05
TRBV5-5-201ENST00000390372 DOT1LQ8TEK3 1739 aa14.75□□□□□ -0.05
TRBV5-5-201ENST00000390372 KDRP35968 1356 aa14.74□□□□□ -0.05
TRBV5-5-201ENST00000390372 C1orf141Q5JVX7 400 aa14.74□□□□□ -0.05
TRBV5-5-201ENST00000390372 MPRIPQ6WCQ1 1025 aa14.74□□□□□ -0.05
TRBV5-5-201ENST00000390372 BTAF1O14981 1849 aa14.73□□□□□ -0.05
TRBV5-5-201ENST00000390372 ZNF530Q6P9A1 599 aaPredicted RBP14.73□□□□□ -0.05
TRBV5-5-201ENST00000390372 AEBP1Q8IUX7 1158 aa14.73□□□□□ -0.05
TRBV5-5-201ENST00000390372 SMARCC1Q92922 1105 aaPredicted RBP14.73□□□□□ -0.05
TRBV5-5-201ENST00000390372 NUDCQ9Y266 331 aa14.73□□□□□ -0.05
TRBV5-5-201ENST00000390372 U2SURPO15042 1029 aaKnown RBP14.72□□□□□ -0.05
TRBV5-5-201ENST00000390372 PPP2R1AP30153 589 aa14.72□□□□□ -0.05
TRBV5-5-201ENST00000390372 DCAF5Q96JK2 942 aa14.72□□□□□ -0.05
TRBV5-5-201ENST00000390372 TMOD3Q9NYL9 352 aa14.72□□□□□ -0.05
TRBV5-5-201ENST00000390372 HMOX1P09601 288 aa14.71□□□□□ -0.05
TRBV5-5-201ENST00000390372 DDX10Q13206 875 aaKnown RBP14.71□□□□□ -0.05
TRBV5-5-201ENST00000390372 SLC15A2Q16348 729 aa14.71□□□□□ -0.05
TRBV5-5-201ENST00000390372 ERVV-2B6SEH9 535 aa14.7□□□□□ -0.06
TRBV5-5-201ENST00000390372 CCNL1Q9UK58 526 aaPredicted RBP14.7□□□□□ -0.06
TRBV5-5-201ENST00000390372 PIGBQ92521 554 aa14.69□□□□□ -0.06
TRBV5-5-201ENST00000390372 KAT6BQ8WYB5 2073 aa14.69□□□□□ -0.06
TRBV5-5-201ENST00000390372 CABP4P57796 275 aa14.68□□□□□ -0.06
TRBV5-5-201ENST00000390372 RALBP1Q15311 655 aa14.68□□□□□ -0.06
TRBV5-5-201ENST00000390372 AKAP4Q5JQC9 854 aa14.68□□□□□ -0.06
TRBV5-5-201ENST00000390372 ANO8Q9HCE9 1232 aaPredicted RBP14.68□□□□□ -0.06
TRBV5-5-201ENST00000390372 LRRC4BQ9NT99 713 aa14.68□□□□□ -0.06
TRBV5-5-201ENST00000390372 PALLDQ8WX93 1383 aa14.68□□□□□ -0.06
TRBV5-5-201ENST00000390372 COL3A1P02461 1466 aaPredicted RBP14.68□□□□□ -0.06
TRBV5-5-201ENST00000390372 SPON1Q9HCB6 807 aa14.66□□□□□ -0.06
TRBV5-5-201ENST00000390372 U2AF1L5P0DN76 240 aaPredicted RBP14.65□□□□□ -0.06
TRBV5-5-201ENST00000390372 U2AF1Q01081 240 aaKnown RBP eCLIP14.65□□□□□ -0.06
TRBV5-5-201ENST00000390372 TFCP2L1Q9NZI6 479 aa14.65□□□□□ -0.06
TRBV5-5-201ENST00000390372 TOGARAM1Q9Y4F4 1720 aa14.65□□□□□ -0.06
TRBV5-5-201ENST00000390372 LRP5O75197 1615 aa14.65□□□□□ -0.06
TRBV5-5-201ENST00000390372 LY75O60449 1722 aa14.64□□□□□ -0.07
TRBV5-5-201ENST00000390372 NEFMP07197 916 aa14.64□□□□□ -0.07
TRBV5-5-201ENST00000390372 MTHFSDQ2M296 383 aaKnown RBP14.64□□□□□ -0.07
TRBV5-5-201ENST00000390372 GAS2L2Q8NHY3 880 aa14.64□□□□□ -0.07
TRBV5-5-201ENST00000390372 AKT1S1Q96B36 256 aa14.64□□□□□ -0.07
TRBV5-5-201ENST00000390372 FCHSD2O94868 740 aa14.63□□□□□ -0.07
TRBV5-5-201ENST00000390372 KCNQ4P56696 695 aa14.63□□□□□ -0.07
TRBV5-5-201ENST00000390372 ASAP1Q9ULH1 1129 aa14.63□□□□□ -0.07
TRBV5-5-201ENST00000390372 ITGB4P16144 1822 aa14.63□□□□□ -0.07
TRBV5-5-201ENST00000390372 PAPPAQ13219 1627 aa14.63□□□□□ -0.07
TRBV5-5-201ENST00000390372 LOC102724428A0A0B4J2F2 783 aa14.62□□□□□ -0.07
TRBV5-5-201ENST00000390372 KDM6AO15550 1401 aaPredicted RBP14.62□□□□□ -0.07
TRBV5-5-201ENST00000390372 PRKAR2BP31323 418 aa14.62□□□□□ -0.07
TRBV5-5-201ENST00000390372 SIK1P57059 783 aa14.62□□□□□ -0.07
TRBV5-5-201ENST00000390372 ZNF827Q17R98 1081 aa14.62□□□□□ -0.07
TRBV5-5-201ENST00000390372 NFATC2IPQ8NCF5 419 aa14.62□□□□□ -0.07
TRBV5-5-201ENST00000390372 PNNQ9H307 717 aaKnown RBP14.62□□□□□ -0.07
TRBV5-5-201ENST00000390372 ATG3Q9NT62 314 aa14.62□□□□□ -0.07
TRBV5-5-201ENST00000390372 PPP1R1BQ9UD71 204 aaPredicted RBP14.62□□□□□ -0.07
TRBV5-5-201ENST00000390372 GNAT3A8MTJ3 354 aa14.61□□□□□ -0.07
TRBV5-5-201ENST00000390372 ATP6V1AP38606 617 aa14.61□□□□□ -0.07
TRBV5-5-201ENST00000390372 FLAD1Q8NFF5 587 aa14.61□□□□□ -0.07
TRBV5-5-201ENST00000390372 SLC16A10Q8TF71 515 aa14.61□□□□□ -0.07
TRBV5-5-201ENST00000390372 MTFR1LQ9H019 292 aa14.61□□□□□ -0.07
TRBV5-5-201ENST00000390372 RSPH6AQ9H0K4 717 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms