RNA–Protein interactions for RNA: ENST00000390278.3

IGKV1D-42-201, Transcript of immunoglobulin kappa variable 1D-42 (non-functional), humanhuman

APPRIS P1 BASIC

Gene IGKV1D-42, Length 373 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-42-201ENST00000390278 GGNBP2Q9H3C7 697 aa14.12□□□□□ -0.15
IGKV1D-42-201ENST00000390278 USP47Q96K76 1375 aa14.11□□□□□ -0.15
IGKV1D-42-201ENST00000390278 FYB1O15117 783 aa14.11□□□□□ -0.15
IGKV1D-42-201ENST00000390278 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
IGKV1D-42-201ENST00000390278 USHBP1Q8N6Y0 703 aa14.11□□□□□ -0.15
IGKV1D-42-201ENST00000390278 GOLGB1Q14789 3259 aaKnown RBP14.11□□□□□ -0.15
IGKV1D-42-201ENST00000390278 NBPF6Q5VWK0 638 aa14.1□□□□□ -0.15
IGKV1D-42-201ENST00000390278 NBPF4Q96M43 638 aa14.1□□□□□ -0.15
IGKV1D-42-201ENST00000390278 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
IGKV1D-42-201ENST00000390278 ZCRB1Q8TBF4 217 aaKnown RBP14.09□□□□□ -0.15
IGKV1D-42-201ENST00000390278 SYTL4Q96C24 671 aaPredicted RBP14.09□□□□□ -0.15
IGKV1D-42-201ENST00000390278 ARXQ96QS3 562 aa14.09□□□□□ -0.15
IGKV1D-42-201ENST00000390278 PNPLA7Q6ZV29 1317 aa14.09□□□□□ -0.15
IGKV1D-42-201ENST00000390278 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
IGKV1D-42-201ENST00000390278 TOGARAM1Q9Y4F4 1720 aa14.08□□□□□ -0.16
IGKV1D-42-201ENST00000390278 ITGB4P16144 1822 aa14.08□□□□□ -0.16
IGKV1D-42-201ENST00000390278 TAF1LQ8IZX4 1826 aa14.07□□□□□ -0.16
IGKV1D-42-201ENST00000390278 TMF1P82094 1093 aa14.07□□□□□ -0.16
IGKV1D-42-201ENST00000390278 HSP90AB2PQ58FF8 381 aa14.07□□□□□ -0.16
IGKV1D-42-201ENST00000390278 SLC27A3Q5K4L6 730 aa14.07□□□□□ -0.16
IGKV1D-42-201ENST00000390278 CARD14Q9BXL6 1004 aa14.07□□□□□ -0.16
IGKV1D-42-201ENST00000390278 C5P01031 1676 aa14.06□□□□□ -0.16
IGKV1D-42-201ENST00000390278 MAP2P11137 1827 aaKnown RBP14.06□□□□□ -0.16
IGKV1D-42-201ENST00000390278 MAP3K5Q99683 1374 aa14.05□□□□□ -0.16
IGKV1D-42-201ENST00000390278 PKD1L3Q7Z443 1732 aa14.04□□□□□ -0.16
IGKV1D-42-201ENST00000390278 ANKRD26Q9UPS8 1709 aa14.04□□□□□ -0.16
IGKV1D-42-201ENST00000390278 ZNF784Q8NCA9 323 aaPredicted RBP14.04□□□□□ -0.16
IGKV1D-42-201ENST00000390278 TFCP2L1Q9NZI6 479 aa14.04□□□□□ -0.16
IGKV1D-42-201ENST00000390278 INSRP06213 1382 aa14.04□□□□□ -0.16
IGKV1D-42-201ENST00000390278 SLC24A1O60721 1099 aa14.03□□□□□ -0.16
IGKV1D-42-201ENST00000390278 TRIM26Q12899 539 aaPredicted RBP14.03□□□□□ -0.16
IGKV1D-42-201ENST00000390278 CCNL1Q9UK58 526 aaPredicted RBP14.03□□□□□ -0.16
IGKV1D-42-201ENST00000390278 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
IGKV1D-42-201ENST00000390278 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
IGKV1D-42-201ENST00000390278 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.16
IGKV1D-42-201ENST00000390278 FLT4P35916 1363 aa14.02□□□□□ -0.17
IGKV1D-42-201ENST00000390278 KLHL34Q8N239 644 aa14.02□□□□□ -0.17
IGKV1D-42-201ENST00000390278 RAPGEF4Q8WZA2 1011 aa14.02□□□□□ -0.17
IGKV1D-42-201ENST00000390278 CYP27B1O15528 508 aa14.01□□□□□ -0.17
IGKV1D-42-201ENST00000390278 TATP17735 454 aaPredicted RBP14.01□□□□□ -0.17
IGKV1D-42-201ENST00000390278 COL23A1Q86Y22 540 aaPredicted RBP14.01□□□□□ -0.17
IGKV1D-42-201ENST00000390278 NLGN2Q8NFZ4 835 aa14.01□□□□□ -0.17
IGKV1D-42-201ENST00000390278 SLC16A10Q8TF71 515 aa14.01□□□□□ -0.17
IGKV1D-42-201ENST00000390278 CGNL1Q0VF96 1302 aa14□□□□□ -0.17
IGKV1D-42-201ENST00000390278 NCAPD2Q15021 1401 aa13.99□□□□□ -0.17
IGKV1D-42-201ENST00000390278 MSL1Q68DK7 614 aa13.99□□□□□ -0.17
IGKV1D-42-201ENST00000390278 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
IGKV1D-42-201ENST00000390278 KIF24Q5T7B8 1368 aa13.98□□□□□ -0.17
IGKV1D-42-201ENST00000390278 PCDH11XQ9BZA7 1347 aa13.98□□□□□ -0.17
IGKV1D-42-201ENST00000390278 PCDH11YQ9BZA8 1340 aa13.98□□□□□ -0.17
IGKV1D-42-201ENST00000390278 POLD1P28340 1107 aa13.98□□□□□ -0.17
IGKV1D-42-201ENST00000390278 GPR162Q16538 588 aa13.98□□□□□ -0.17
IGKV1D-42-201ENST00000390278 MPRIPQ6WCQ1 1025 aa13.98□□□□□ -0.17
IGKV1D-42-201ENST00000390278 SMIM5Q71RC9 77 aa13.98□□□□□ -0.17
IGKV1D-42-201ENST00000390278 AMIGO3Q86WK7 504 aa13.98□□□□□ -0.17
IGKV1D-42-201ENST00000390278 C4BP0C0L5 1744 aa13.98□□□□□ -0.17
IGKV1D-42-201ENST00000390278 PALLDQ8WX93 1383 aa13.97□□□□□ -0.17
IGKV1D-42-201ENST00000390278 MSH5O43196 834 aa13.97□□□□□ -0.17
IGKV1D-42-201ENST00000390278 PPM1GO15355 546 aaPredicted RBP13.96□□□□□ -0.17
IGKV1D-42-201ENST00000390278 CDCA8Q53HL2 280 aa13.96□□□□□ -0.17
IGKV1D-42-201ENST00000390278 PELP1Q8IZL8 1130 aaKnown RBP13.96□□□□□ -0.17
IGKV1D-42-201ENST00000390278 YBX3P16989 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
IGKV1D-42-201ENST00000390278 PIGBQ92521 554 aa13.95□□□□□ -0.18
IGKV1D-42-201ENST00000390278 EYA1Q99502 592 aa13.94□□□□□ -0.18
IGKV1D-42-201ENST00000390278 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
IGKV1D-42-201ENST00000390278 POLKQ9UBT6 870 aa13.93□□□□□ -0.18
IGKV1D-42-201ENST00000390278 TNNT2P45379 298 aaPredicted RBP13.92□□□□□ -0.18
IGKV1D-42-201ENST00000390278 NKX1-1Q15270 411 aaPredicted RBP13.92□□□□□ -0.18
IGKV1D-42-201ENST00000390278 POLR3GLQ9BT43 218 aa13.92□□□□□ -0.18
IGKV1D-42-201ENST00000390278 PHF14O94880 888 aa13.9□□□□□ -0.18
IGKV1D-42-201ENST00000390278 EIF4A2Q14240 407 aaKnown RBP13.9□□□□□ -0.18
IGKV1D-42-201ENST00000390278 LINC00116Q8NCU8 138 aa13.9□□□□□ -0.18
IGKV1D-42-201ENST00000390278 PCGF6Q9BYE7 350 aa13.9□□□□□ -0.18
IGKV1D-42-201ENST00000390278 ASAP1Q9ULH1 1129 aa13.9□□□□□ -0.18
IGKV1D-42-201ENST00000390278 PHKG2P15735 406 aa13.89□□□□□ -0.19
IGKV1D-42-201ENST00000390278 ITPK1Q13572 414 aa13.89□□□□□ -0.19
IGKV1D-42-201ENST00000390278 SMARCC1Q92922 1105 aaPredicted RBP13.89□□□□□ -0.19
IGKV1D-42-201ENST00000390278 SPG7Q9UQ90 795 aa13.89□□□□□ -0.19
IGKV1D-42-201ENST00000390278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
IGKV1D-42-201ENST00000390278 LOC102724428A0A0B4J2F2 783 aa13.88□□□□□ -0.19
IGKV1D-42-201ENST00000390278 SIK1P57059 783 aa13.88□□□□□ -0.19
IGKV1D-42-201ENST00000390278 C1QTNF8P60827 252 aa13.88□□□□□ -0.19
IGKV1D-42-201ENST00000390278 AK7Q96M32 723 aa13.88□□□□□ -0.19
IGKV1D-42-201ENST00000390278 TIMELESSQ9UNS1 1208 aa13.88□□□□□ -0.19
IGKV1D-42-201ENST00000390278 MYH14Q7Z406 1995 aaKnown RBP13.87□□□□□ -0.19
IGKV1D-42-201ENST00000390278 HSPA5P11021 654 aaKnown RBP13.86□□□□□ -0.19
IGKV1D-42-201ENST00000390278 FLAD1Q8NFF5 587 aa13.86□□□□□ -0.19
IGKV1D-42-201ENST00000390278 ATG3Q9NT62 314 aa13.86□□□□□ -0.19
IGKV1D-42-201ENST00000390278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.19
IGKV1D-42-201ENST00000390278 TMOD3Q9NYL9 352 aa13.86□□□□□ -0.19
IGKV1D-42-201ENST00000390278 WWC3Q9ULE0 1092 aa13.86□□□□□ -0.19
IGKV1D-42-201ENST00000390278 COL5A3P25940 1745 aaPredicted RBP13.86□□□□□ -0.19
IGKV1D-42-201ENST00000390278 KIAA1551Q9HCM1 1747 aa13.85□□□□□ -0.19
IGKV1D-42-201ENST00000390278 SENP3-EIF4A1A0A087X0R7 540 aa13.85□□□□□ -0.19
IGKV1D-42-201ENST00000390278 IFNL2Q8IZJ0 200 aa13.85□□□□□ -0.19
IGKV1D-42-201ENST00000390278 SLC4A9Q96Q91 983 aa13.85□□□□□ -0.19
IGKV1D-42-201ENST00000390278 PANK3Q9H999 370 aa13.85□□□□□ -0.19
IGKV1D-42-201ENST00000390278 CD2APQ9Y5K6 639 aa13.85□□□□□ -0.19
IGKV1D-42-201ENST00000390278 IGSF1Q8N6C5 1336 aa13.85□□□□□ -0.19
IGKV1D-42-201ENST00000390278 KDRP35968 1356 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms