RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ANXA1P04083 346 aa12.95□□□□□ -0.34
LTN1-203ENST00000389195 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
LTN1-203ENST00000389195 ARHGEF25Q86VW2 580 aa12.95□□□□□ -0.34
LTN1-203ENST00000389195 BACH2Q9BYV9 841 aa12.95□□□□□ -0.34
LTN1-203ENST00000389195 SLC4A10Q6U841 1118 aa12.94□□□□□ -0.34
LTN1-203ENST00000389195 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
LTN1-203ENST00000389195 GNAT3A8MTJ3 354 aa12.94□□□□□ -0.34
LTN1-203ENST00000389195 LMOD3Q0VAK6 560 aa12.94□□□□□ -0.34
LTN1-203ENST00000389195 PDZRN3Q9UPQ7 1066 aa12.94□□□□□ -0.34
LTN1-203ENST00000389195 APBB1O00213 710 aa12.93□□□□□ -0.34
LTN1-203ENST00000389195 SEC24BO95487 1268 aa12.93□□□□□ -0.34
LTN1-203ENST00000389195 EIF2S2P20042 333 aaKnown RBP12.93□□□□□ -0.34
LTN1-203ENST00000389195 SLC4A3P48751 1232 aa12.93□□□□□ -0.34
LTN1-203ENST00000389195 NLRP2Q9NX02 1062 aa12.93□□□□□ -0.34
LTN1-203ENST00000389195 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
LTN1-203ENST00000389195 ARHGEF10O15013 1369 aa12.92□□□□□ -0.34
LTN1-203ENST00000389195 LTN1O94822 1766 aa12.92□□□□□ -0.34
LTN1-203ENST00000389195 CRB1P82279 1406 aa12.92□□□□□ -0.34
LTN1-203ENST00000389195 CALD1Q05682 793 aaKnown RBP12.92□□□□□ -0.34
LTN1-203ENST00000389195 USP35Q9P2H5 1018 aa12.92□□□□□ -0.34
LTN1-203ENST00000389195 KDRP35968 1356 aa12.92□□□□□ -0.34
LTN1-203ENST00000389195 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
LTN1-203ENST00000389195 ZBTB40Q9NUA8 1239 aa12.91□□□□□ -0.34
LTN1-203ENST00000389195 CSB-PGBD3P0DP91 1061 aa12.91□□□□□ -0.34
LTN1-203ENST00000389195 ZNF530Q6P9A1 599 aaPredicted RBP12.91□□□□□ -0.34
LTN1-203ENST00000389195 BRINP3Q76B58 766 aa12.91□□□□□ -0.34
LTN1-203ENST00000389195 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
LTN1-203ENST00000389195 KCNH5Q8NCM2 988 aa12.9□□□□□ -0.34
LTN1-203ENST00000389195 RGPD1P0DJD0 1748 aa12.9□□□□□ -0.34
LTN1-203ENST00000389195 MST1RQ04912 1400 aa12.9□□□□□ -0.34
LTN1-203ENST00000389195 ZBTB7BO15156 539 aaPredicted RBP12.9□□□□□ -0.34
LTN1-203ENST00000389195 IPO8O15397 1037 aaKnown RBP12.9□□□□□ -0.34
LTN1-203ENST00000389195 ALDH1L2Q3SY69 923 aa12.9□□□□□ -0.34
LTN1-203ENST00000389195 C8orf34Q49A92 452 aa12.9□□□□□ -0.34
LTN1-203ENST00000389195 GAS2L2Q8NHY3 880 aa12.9□□□□□ -0.34
LTN1-203ENST00000389195 KIF16BQ96L93 1317 aa12.9□□□□□ -0.34
LTN1-203ENST00000389195 MSH6P52701 1360 aa12.9□□□□□ -0.34
LTN1-203ENST00000389195 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.35
LTN1-203ENST00000389195 LNPKQ9C0E8 428 aa12.9□□□□□ -0.35
LTN1-203ENST00000389195 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.35
LTN1-203ENST00000389195 CADPS2Q86UW7 1296 aa12.89□□□□□ -0.35
LTN1-203ENST00000389195 SIRT2Q8IXJ6 389 aa12.89□□□□□ -0.35
LTN1-203ENST00000389195 NFAT5O94916 1531 aa12.89□□□□□ -0.35
LTN1-203ENST00000389195 PIP4K2AP48426 406 aaPredicted RBP12.89□□□□□ -0.35
LTN1-203ENST00000389195 SLC39A6Q13433 755 aa12.89□□□□□ -0.35
LTN1-203ENST00000389195 LMTK3Q96Q04 1460 aa12.89□□□□□ -0.35
LTN1-203ENST00000389195 SLAIN2Q9P270 581 aa12.89□□□□□ -0.35
LTN1-203ENST00000389195 PHAXQ9H814 394 aaKnown RBP12.88□□□□□ -0.35
LTN1-203ENST00000389195 RGPD5Q99666 1765 aa12.88□□□□□ -0.35
LTN1-203ENST00000389195 GOLGB1Q14789 3259 aaKnown RBP12.87□□□□□ -0.35
LTN1-203ENST00000389195 MEIS3Q99687 375 aa12.87□□□□□ -0.35
LTN1-203ENST00000389195 RWDD1Q9H446 243 aaPredicted RBP12.87□□□□□ -0.35
LTN1-203ENST00000389195 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
LTN1-203ENST00000389195 PXDNQ92626 1479 aa12.86□□□□□ -0.35
LTN1-203ENST00000389195 KIAA0232Q92628 1395 aa12.86□□□□□ -0.35
LTN1-203ENST00000389195 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
LTN1-203ENST00000389195 STRN4Q9NRL3 753 aa12.86□□□□□ -0.35
LTN1-203ENST00000389195 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
LTN1-203ENST00000389195 ERBB3P21860 1342 aa12.85□□□□□ -0.35
LTN1-203ENST00000389195 FKBP5Q13451 457 aaPredicted RBP12.85□□□□□ -0.35
LTN1-203ENST00000389195 ANKRD45Q5TZF3 282 aa12.85□□□□□ -0.35
LTN1-203ENST00000389195 ANP32AP39687 249 aaKnown RBP12.84□□□□□ -0.35
LTN1-203ENST00000389195 MED1Q15648 1581 aaPredicted RBP12.84□□□□□ -0.35
LTN1-203ENST00000389195 BTBD11A6QL63 1104 aa12.84□□□□□ -0.35
LTN1-203ENST00000389195 C16orf71Q8IYS4 520 aaPredicted RBP12.84□□□□□ -0.35
LTN1-203ENST00000389195 STRCQ7RTU9 1775 aa12.84□□□□□ -0.35
LTN1-203ENST00000389195 USP19O94966 1318 aa12.84□□□□□ -0.35
LTN1-203ENST00000389195 NPHP3Q7Z494 1330 aa12.84□□□□□ -0.35
LTN1-203ENST00000389195 MS4A1P11836 297 aa12.83□□□□□ -0.35
LTN1-203ENST00000389195 TEFQ10587 303 aa12.83□□□□□ -0.35
LTN1-203ENST00000389195 FAM161AQ3B820 660 aa12.83□□□□□ -0.35
LTN1-203ENST00000389195 ABCC4O15439 1325 aa12.83□□□□□ -0.36
LTN1-203ENST00000389195 SMARCA5O60264 1052 aaPredicted RBP12.82□□□□□ -0.36
LTN1-203ENST00000389195 PROSER3Q2NL68 480 aa12.82□□□□□ -0.36
LTN1-203ENST00000389195 C1orf141Q5JVX7 400 aa12.82□□□□□ -0.36
LTN1-203ENST00000389195 NFATC2IPQ8NCF5 419 aa12.82□□□□□ -0.36
LTN1-203ENST00000389195 HDGFL1Q5TGJ6 251 aa12.82□□□□□ -0.36
LTN1-203ENST00000389195 PRDM11Q9NQV5 511 aa12.82□□□□□ -0.36
LTN1-203ENST00000389195 CHPF2Q9P2E5 772 aa12.82□□□□□ -0.36
LTN1-203ENST00000389195 SPATA31A3Q5VYP0 1347 aa12.82□□□□□ -0.36
LTN1-203ENST00000389195 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
LTN1-203ENST00000389195 FLIIQ13045 1269 aa12.81□□□□□ -0.36
LTN1-203ENST00000389195 OTUD7AQ8TE49 926 aaPredicted RBP12.81□□□□□ -0.36
LTN1-203ENST00000389195 RGS12O14924 1447 aa12.81□□□□□ -0.36
LTN1-203ENST00000389195 RNMTO43148 476 aaKnown RBP12.81□□□□□ -0.36
LTN1-203ENST00000389195 NBR1Q14596 966 aa12.81□□□□□ -0.36
LTN1-203ENST00000389195 RAPGEF4Q8WZA2 1011 aa12.81□□□□□ -0.36
LTN1-203ENST00000389195 AIMP1Q12904 312 aaKnown RBP12.8□□□□□ -0.36
LTN1-203ENST00000389195 IPO9Q96P70 1041 aaKnown RBP12.8□□□□□ -0.36
LTN1-203ENST00000389195 STK31Q9BXU1 1019 aa12.8□□□□□ -0.36
LTN1-203ENST00000389195 API5Q9BZZ5 524 aaKnown RBP12.8□□□□□ -0.36
LTN1-203ENST00000389195 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
LTN1-203ENST00000389195 ERICH6Q7L0X2 663 aa12.8□□□□□ -0.36
LTN1-203ENST00000389195 DDX54Q8TDD1 881 aaKnown RBP12.8□□□□□ -0.36
LTN1-203ENST00000389195 TRPM3Q9HCF6 1732 aaPredicted RBP12.8□□□□□ -0.36
LTN1-203ENST00000389195 XIRP1Q702N8 1843 aaKnown RBP12.79□□□□□ -0.36
LTN1-203ENST00000389195 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
LTN1-203ENST00000389195 AKAP4Q5JQC9 854 aa12.79□□□□□ -0.36
LTN1-203ENST00000389195 TOM1L2Q6ZVM7 507 aa12.79□□□□□ -0.36
LTN1-203ENST00000389195 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms