RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 FLT4P35916 1363 aa35.45■■■■□ 3.26
KRT18-201ENST00000388835 INSRP06213 1382 aa35.44■■■■□ 3.26
KRT18-201ENST00000388835 SYTL4Q96C24 671 aaPredicted RBP35.43■■■■□ 3.26
KRT18-201ENST00000388835 ZBTB7AO95365 584 aa35.42■■■■□ 3.26
KRT18-201ENST00000388835 EMILIN1Q9Y6C2 1016 aa35.42■■■■□ 3.26
KRT18-201ENST00000388835 DOT1LQ8TEK3 1739 aa35.42■■■■□ 3.26
KRT18-201ENST00000388835 EIF4G2P78344 907 aaKnown RBP eCLIP35.42■■■■□ 3.26
KRT18-201ENST00000388835 HSPA5P11021 654 aaKnown RBP35.41■■■■□ 3.26
KRT18-201ENST00000388835 RAPGEF4Q8WZA2 1011 aa35.41■■■■□ 3.26
KRT18-201ENST00000388835 PPM1GO15355 546 aaPredicted RBP35.39■■■■□ 3.26
KRT18-201ENST00000388835 PRIM1P49642 420 aaKnown RBP35.39■■■■□ 3.26
KRT18-201ENST00000388835 CGNL1Q0VF96 1302 aa35.39■■■■□ 3.26
KRT18-201ENST00000388835 KIF24Q5T7B8 1368 aa35.39■■■■□ 3.26
KRT18-201ENST00000388835 ATF5Q9Y2D1 282 aaPredicted RBP35.37■■■■□ 3.25
KRT18-201ENST00000388835 TATP17735 454 aaPredicted RBP35.36■■■■□ 3.25
KRT18-201ENST00000388835 LRRC4BQ9NT99 713 aa35.36■■■■□ 3.25
KRT18-201ENST00000388835 PAPPAQ13219 1627 aa35.36■■■■□ 3.25
KRT18-201ENST00000388835 MAP2P11137 1827 aaKnown RBP35.35■■■■□ 3.25
KRT18-201ENST00000388835 ZNF827Q17R98 1081 aa35.31■■■■□ 3.24
KRT18-201ENST00000388835 ANKRD26Q9UPS8 1709 aa35.3■■■■□ 3.24
KRT18-201ENST00000388835 NSD2O96028 1365 aa35.3■■■■□ 3.24
KRT18-201ENST00000388835 KCNQ4P56696 695 aa35.3■■■■□ 3.24
KRT18-201ENST00000388835 TNNT2P45379 298 aaPredicted RBP35.28■■■■□ 3.24
KRT18-201ENST00000388835 SLC27A3Q5K4L6 730 aa35.28■■■■□ 3.24
KRT18-201ENST00000388835 PTGER2P43116 358 aa35.27■■■■□ 3.24
KRT18-201ENST00000388835 PCDH11XQ9BZA7 1347 aa35.26■■■■□ 3.23
KRT18-201ENST00000388835 PCDH11YQ9BZA8 1340 aa35.26■■■■□ 3.23
KRT18-201ENST00000388835 MTFR1LQ9H019 292 aa35.25■■■■□ 3.23
KRT18-201ENST00000388835 PANK3Q9H999 370 aa35.25■■■■□ 3.23
KRT18-201ENST00000388835 POLKQ9UBT6 870 aa35.25■■■■□ 3.23
KRT18-201ENST00000388835 LY75O60449 1722 aa35.24■■■■□ 3.23
KRT18-201ENST00000388835 WASHC2AQ641Q2 1341 aa35.24■■■■□ 3.23
KRT18-201ENST00000388835 AKT1S1Q96B36 256 aa35.22■■■■□ 3.23
KRT18-201ENST00000388835 CYP27B1O15528 508 aa35.19■■■■□ 3.22
KRT18-201ENST00000388835 EYA1Q99502 592 aa35.19■■■■□ 3.22
KRT18-201ENST00000388835 PKD1L3Q7Z443 1732 aa35.18■■■■□ 3.22
KRT18-201ENST00000388835 CCNL1Q9UK58 526 aaPredicted RBP35.18■■■■□ 3.22
KRT18-201ENST00000388835 NCAPD2Q15021 1401 aa35.17■■■■□ 3.22
KRT18-201ENST00000388835 TUBGCP6Q96RT7 1819 aa35.16■■■■□ 3.22
KRT18-201ENST00000388835 DCAF8L1A6NGE4 600 aa35.16■■■■□ 3.22
KRT18-201ENST00000388835 TFCP2L1Q9NZI6 479 aa35.16■■■■□ 3.22
KRT18-201ENST00000388835 SGIP1Q9BQI5 828 aa35.15■■■■□ 3.22
KRT18-201ENST00000388835 QSER1Q2KHR3 1735 aa35.15■■■■□ 3.22
KRT18-201ENST00000388835 MPRIPQ6WCQ1 1025 aa35.14■■■■□ 3.22
KRT18-201ENST00000388835 TOGARAM1Q9Y4F4 1720 aa35.13■■■■□ 3.22
KRT18-201ENST00000388835 FHDC1Q9C0D6 1143 aaPredicted RBP35.13■■■■□ 3.21
KRT18-201ENST00000388835 SPG7Q9UQ90 795 aa35.13■■■■□ 3.21
KRT18-201ENST00000388835 PNPLA7Q6ZV29 1317 aa35.12■■■■□ 3.21
KRT18-201ENST00000388835 ITGB4P16144 1822 aa35.12■■■■□ 3.21
KRT18-201ENST00000388835 EIF4A2Q14240 407 aaKnown RBP35.12■■■■□ 3.21
KRT18-201ENST00000388835 ARXQ96QS3 562 aa35.09■■■■□ 3.21
KRT18-201ENST00000388835 SYT17Q9BSW7 474 aa35.08■■■■□ 3.21
KRT18-201ENST00000388835 PALLDQ8WX93 1383 aa35.06■■■■□ 3.2
KRT18-201ENST00000388835 MORC1Q86VD1 984 aa35.06■■■■□ 3.2
KRT18-201ENST00000388835 SLC16A10Q8TF71 515 aa35.06■■■■□ 3.2
KRT18-201ENST00000388835 C5P01031 1676 aa35.04■■■■□ 3.2
KRT18-201ENST00000388835 YY1P25490 414 aa35.04■■■■□ 3.2
KRT18-201ENST00000388835 KNSTRNQ9Y448 316 aa35.04■■■■□ 3.2
KRT18-201ENST00000388835 MSH5O43196 834 aa35.03■■■■□ 3.2
KRT18-201ENST00000388835 NKX1-1Q15270 411 aaPredicted RBP35.03■■■■□ 3.2
KRT18-201ENST00000388835 PIGBQ92521 554 aa35.02■■■■□ 3.2
KRT18-201ENST00000388835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.02■■■■□ 3.2
KRT18-201ENST00000388835 TAF1LQ8IZX4 1826 aa35■■■■□ 3.19
KRT18-201ENST00000388835 KIF7Q2M1P5 1343 aa34.99■■■■□ 3.19
KRT18-201ENST00000388835 PHKG2P15735 406 aa34.99■■■■□ 3.19
KRT18-201ENST00000388835 POLD1P28340 1107 aa34.99■■■■□ 3.19
KRT18-201ENST00000388835 IFNL2Q8IZJ0 200 aa34.99■■■■□ 3.19
KRT18-201ENST00000388835 SMARCC1Q92922 1105 aaPredicted RBP34.99■■■■□ 3.19
KRT18-201ENST00000388835 IGSF1Q8N6C5 1336 aa34.98■■■■□ 3.19
KRT18-201ENST00000388835 KLHL34Q8N239 644 aa34.98■■■■□ 3.19
KRT18-201ENST00000388835 COL23A1Q86Y22 540 aaPredicted RBP34.97■■■■□ 3.19
KRT18-201ENST00000388835 COL24A1Q17RW2 1714 aa34.96■■■■□ 3.19
KRT18-201ENST00000388835 TMOD3Q9NYL9 352 aa34.96■■■■□ 3.19
KRT18-201ENST00000388835 MAP3K5Q99683 1374 aa34.91■■■■□ 3.18
KRT18-201ENST00000388835 C4BP0C0L5 1744 aa34.9■■■■□ 3.18
KRT18-201ENST00000388835 AMER1Q5JTC6 1135 aaPredicted RBP34.9■■■■□ 3.18
KRT18-201ENST00000388835 MSL1Q68DK7 614 aa34.9■■■■□ 3.18
KRT18-201ENST00000388835 ASAP1Q9ULH1 1129 aa34.9■■■■□ 3.18
KRT18-201ENST00000388835 HMGB2P26583 209 aaKnown RBP34.89■■■■□ 3.18
KRT18-201ENST00000388835 AEBP1Q8IUX7 1158 aa34.88■■■■□ 3.17
KRT18-201ENST00000388835 PLEKHO1Q53GL0 409 aaPredicted RBP34.87■■■■□ 3.17
KRT18-201ENST00000388835 AK7Q96M32 723 aa34.87■■■■□ 3.17
KRT18-201ENST00000388835 LOC102724428A0A0B4J2F2 783 aa34.87■■■■□ 3.17
KRT18-201ENST00000388835 SIK1P57059 783 aa34.87■■■■□ 3.17
KRT18-201ENST00000388835 PLEKHG2Q9H7P9 1386 aa34.86■■■■□ 3.17
KRT18-201ENST00000388835 ZNF530Q6P9A1 599 aaPredicted RBP34.85■■■■□ 3.17
KRT18-201ENST00000388835 FLAD1Q8NFF5 587 aa34.84■■■■□ 3.17
KRT18-201ENST00000388835 SMIM5Q71RC9 77 aa34.83■■■■□ 3.17
KRT18-201ENST00000388835 PHF14O94880 888 aa34.83■■■■□ 3.17
KRT18-201ENST00000388835 SULT6B1Q6IMI4 303 aa34.83■■■■□ 3.17
KRT18-201ENST00000388835 AMIGO3Q86WK7 504 aa34.83■■■■□ 3.17
KRT18-201ENST00000388835 ATG3Q9NT62 314 aa34.83■■■■□ 3.17
KRT18-201ENST00000388835 UBR3Q6ZT12 1888 aa34.82■■■■□ 3.16
KRT18-201ENST00000388835 LINC00116Q8NCU8 138 aa34.82■■■■□ 3.16
KRT18-201ENST00000388835 AMOTQ4VCS5 1084 aa34.81■■■■□ 3.16
KRT18-201ENST00000388835 HSP90AB1P08238 724 aaKnown RBP34.8■■■■□ 3.16
KRT18-201ENST00000388835 IL13P35225 146 aa34.8■■■■□ 3.16
KRT18-201ENST00000388835 ATP6V1AP38606 617 aa34.8■■■■□ 3.16
KRT18-201ENST00000388835 DCAF5Q96JK2 942 aa34.8■■■■□ 3.16
KRT18-201ENST00000388835 ITPK1Q13572 414 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms