RNA–Protein interactions for RNA: ENST00000383829.6

BRPF1-201, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-201ENST00000383829 TRIM5Q9C035 493 aa20.55■□□□□ 0.88
BRPF1-201ENST00000383829 ESPNB1AK53 854 aa20.55■□□□□ 0.88
BRPF1-201ENST00000383829 CWC27Q6UX04 472 aaKnown RBP20.55■□□□□ 0.88
BRPF1-201ENST00000383829 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
BRPF1-201ENST00000383829 TBC1D2BQ9UPU7 963 aa20.54■□□□□ 0.88
BRPF1-201ENST00000383829 GLRX3O76003 335 aaKnown RBP20.54■□□□□ 0.88
BRPF1-201ENST00000383829 LARP1BQ659C4 914 aaKnown RBP20.54■□□□□ 0.88
BRPF1-201ENST00000383829 NPC1L1Q9UHC9 1359 aa20.54■□□□□ 0.88
BRPF1-201ENST00000383829 MAP7D2Q96T17 732 aa20.53■□□□□ 0.88
BRPF1-201ENST00000383829 CCDC192P0DO97 292 aa20.53■□□□□ 0.88
BRPF1-201ENST00000383829 MTERF4Q7Z6M4 381 aaKnown RBP20.53■□□□□ 0.88
BRPF1-201ENST00000383829 ZNF396Q96N95 335 aaPredicted RBP20.53■□□□□ 0.88
BRPF1-201ENST00000383829 CLSTN1O94985 981 aa20.53■□□□□ 0.88
BRPF1-201ENST00000383829 C8orf34Q49A92 452 aa20.53■□□□□ 0.88
BRPF1-201ENST00000383829 PDRG1Q9NUG6 133 aa20.53■□□□□ 0.88
BRPF1-201ENST00000383829 ZNF518AQ6AHZ1 1483 aa20.53■□□□□ 0.88
BRPF1-201ENST00000383829 CABP4P57796 275 aa20.53■□□□□ 0.88
BRPF1-201ENST00000383829 TBC1D9Q6ZT07 1266 aa20.53■□□□□ 0.88
BRPF1-201ENST00000383829 JAKMIP1Q96N16 626 aaKnown RBP20.53■□□□□ 0.88
BRPF1-201ENST00000383829 CARD14Q9BXL6 1004 aa20.53■□□□□ 0.88
BRPF1-201ENST00000383829 FBXW7Q969H0 707 aa20.52■□□□□ 0.88
BRPF1-201ENST00000383829 F6X3S4 739 aa20.52■□□□□ 0.88
BRPF1-201ENST00000383829 NUTM1Q86Y26 1132 aa20.52■□□□□ 0.88
BRPF1-201ENST00000383829 CCDC158Q5M9N0 1113 aa20.52■□□□□ 0.88
BRPF1-201ENST00000383829 CCAR2Q8N163 923 aaKnown RBP20.52■□□□□ 0.88
BRPF1-201ENST00000383829 NUCB1Q02818 461 aa20.51■□□□□ 0.87
BRPF1-201ENST00000383829 ASXL2Q76L83 1435 aa20.51■□□□□ 0.87
BRPF1-201ENST00000383829 MYL6BP14649 208 aa20.51■□□□□ 0.87
BRPF1-201ENST00000383829 CCDC47Q96A33 483 aaKnown RBP20.51■□□□□ 0.87
BRPF1-201ENST00000383829 HMGN5P82970 282 aaKnown RBP20.51■□□□□ 0.87
BRPF1-201ENST00000383829 KRT32Q14532 448 aa20.51■□□□□ 0.87
BRPF1-201ENST00000383829 RNF123Q5XPI4 1314 aa20.51■□□□□ 0.87
BRPF1-201ENST00000383829 KIF6Q6ZMV9 814 aa20.51■□□□□ 0.87
BRPF1-201ENST00000383829 WDR7Q9Y4E6 1490 aa20.51■□□□□ 0.87
BRPF1-201ENST00000383829 GCC2Q8IWJ2 1684 aa20.5■□□□□ 0.87
BRPF1-201ENST00000383829 EIF4G3O43432 1585 aaKnown RBP20.5■□□□□ 0.87
BRPF1-201ENST00000383829 TNPO1Q92973 898 aaKnown RBP20.5■□□□□ 0.87
BRPF1-201ENST00000383829 AMOTL2Q9Y2J4 779 aa20.5■□□□□ 0.87
BRPF1-201ENST00000383829 SART3Q15020 963 aaKnown RBP20.49■□□□□ 0.87
BRPF1-201ENST00000383829 UPF3BQ9BZI7 483 aaKnown RBP20.49■□□□□ 0.87
BRPF1-201ENST00000383829 INSRP06213 1382 aa20.49■□□□□ 0.87
BRPF1-201ENST00000383829 IPO7O95373 1038 aaKnown RBP20.49■□□□□ 0.87
BRPF1-201ENST00000383829 FLIIQ13045 1269 aa20.49■□□□□ 0.87
BRPF1-201ENST00000383829 OLFM4Q6UX06 510 aa20.48■□□□□ 0.87
BRPF1-201ENST00000383829 MAGI3Q5TCQ9 1506 aa20.48■□□□□ 0.87
BRPF1-201ENST00000383829 XBP1P17861 261 aa20.48■□□□□ 0.87
BRPF1-201ENST00000383829 NOC3LQ8WTT2 800 aaKnown RBP20.48■□□□□ 0.87
BRPF1-201ENST00000383829 STK3Q13188 491 aa20.48■□□□□ 0.87
BRPF1-201ENST00000383829 AMOTQ4VCS5 1084 aa20.48■□□□□ 0.87
BRPF1-201ENST00000383829 SPATA31E1Q6ZUB1 1445 aa20.47■□□□□ 0.87
BRPF1-201ENST00000383829 FAM83GA6ND36 823 aa20.47■□□□□ 0.87
BRPF1-201ENST00000383829 STK38Q15208 465 aa20.47■□□□□ 0.87
BRPF1-201ENST00000383829 TNMDQ9H2S6 317 aa20.47■□□□□ 0.87
BRPF1-201ENST00000383829 PBRM1Q86U86 1689 aa20.47■□□□□ 0.87
BRPF1-201ENST00000383829 ABCC10Q5T3U5 1492 aa20.47■□□□□ 0.87
BRPF1-201ENST00000383829 LRRFIP2Q9Y608 721 aaKnown RBP20.47■□□□□ 0.87
BRPF1-201ENST00000383829 TTC39AQ5SRH9 613 aa20.46■□□□□ 0.87
BRPF1-201ENST00000383829 SSFA2P28290 1259 aa20.46■□□□□ 0.87
BRPF1-201ENST00000383829 GPS2Q13227 327 aa20.46■□□□□ 0.87
BRPF1-201ENST00000383829 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.46■□□□□ 0.87
BRPF1-201ENST00000383829 CASTP20810 708 aaKnown RBP20.46■□□□□ 0.87
BRPF1-201ENST00000383829 DNAAF4Q8WXU2 420 aa20.46■□□□□ 0.87
BRPF1-201ENST00000383829 TTC22Q5TAA0 569 aa20.45■□□□□ 0.86
BRPF1-201ENST00000383829 LARP1Q6PKG0 1096 aaKnown RBP20.45■□□□□ 0.86
BRPF1-201ENST00000383829 PHF8Q9UPP1 1060 aa20.45■□□□□ 0.86
BRPF1-201ENST00000383829 BRMS1Q9HCU9 246 aa20.45■□□□□ 0.86
BRPF1-201ENST00000383829 ACEP12821 1306 aa20.45■□□□□ 0.86
BRPF1-201ENST00000383829 RLBP1P12271 317 aa20.44■□□□□ 0.86
BRPF1-201ENST00000383829 CEBPZQ03701 1054 aaKnown RBP20.44■□□□□ 0.86
BRPF1-201ENST00000383829 JMYQ8N9B5 988 aa20.44■□□□□ 0.86
BRPF1-201ENST00000383829 RBM42Q9BTD8 480 aaKnown RBP20.44■□□□□ 0.86
BRPF1-201ENST00000383829 CEP126Q9P2H0 1117 aa20.44■□□□□ 0.86
BRPF1-201ENST00000383829 A0A0U1RQG5 324 aaPredicted RBP20.44■□□□□ 0.86
BRPF1-201ENST00000383829 TOM1L2Q6ZVM7 507 aa20.44■□□□□ 0.86
BRPF1-201ENST00000383829 ZSCAN30Q86W11 494 aa20.44■□□□□ 0.86
BRPF1-201ENST00000383829 FBLN1P23142 703 aa20.44■□□□□ 0.86
BRPF1-201ENST00000383829 CCDC57Q2TAC2 916 aa20.44■□□□□ 0.86
BRPF1-201ENST00000383829 CNNM1Q9NRU3 951 aa20.44■□□□□ 0.86
BRPF1-201ENST00000383829 SPATA32Q96LK8 384 aa20.43■□□□□ 0.86
BRPF1-201ENST00000383829 DBF4Q9UBU7 674 aaPredicted RBP20.43■□□□□ 0.86
BRPF1-201ENST00000383829 CFAP45Q9UL16 551 aa20.43■□□□□ 0.86
BRPF1-201ENST00000383829 SYCE3A1L190 88 aa20.43■□□□□ 0.86
BRPF1-201ENST00000383829 POLKQ9UBT6 870 aa20.42■□□□□ 0.86
BRPF1-201ENST00000383829 CTNNA3Q9UI47 895 aa20.42■□□□□ 0.86
BRPF1-201ENST00000383829 VPS53Q5VIR6 699 aa20.42■□□□□ 0.86
BRPF1-201ENST00000383829 MNS1Q8NEH6 495 aa20.42■□□□□ 0.86
BRPF1-201ENST00000383829 ZC3H6P61129 1189 aaKnown RBP20.42■□□□□ 0.86
BRPF1-201ENST00000383829 MRPL50Q8N5N7 158 aaKnown RBP20.42■□□□□ 0.86
BRPF1-201ENST00000383829 ABCC2Q92887 1545 aa20.42■□□□□ 0.86
BRPF1-201ENST00000383829 CCDC70Q6NSX1 233 aa20.41■□□□□ 0.86
BRPF1-201ENST00000383829 NUP62CLQ9H1M0 184 aa20.41■□□□□ 0.86
BRPF1-201ENST00000383829 SPINK5Q9NQ38 1064 aaPredicted RBP20.41■□□□□ 0.86
BRPF1-201ENST00000383829 SH2B1Q9NRF2 756 aaPredicted RBP20.41■□□□□ 0.86
BRPF1-201ENST00000383829 ZMYM4Q5VZL5 1548 aa20.41■□□□□ 0.86
BRPF1-201ENST00000383829 ME1P48163 572 aa20.41■□□□□ 0.86
BRPF1-201ENST00000383829 XPCQ01831 940 aaPredicted RBP20.41■□□□□ 0.86
BRPF1-201ENST00000383829 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
BRPF1-201ENST00000383829 STRN4Q9NRL3 753 aa20.41■□□□□ 0.86
BRPF1-201ENST00000383829 MAST1Q9Y2H9 1570 aa20.41■□□□□ 0.86
BRPF1-201ENST00000383829 ANKRD44Q8N8A2 993 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms