RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 SLC16A10Q8TF71 515 aa25.03■■□□□ 1.6
RPUSD3-201ENST00000383820 ARXQ96QS3 562 aa25.03■■□□□ 1.6
RPUSD3-201ENST00000383820 CGNL1Q0VF96 1302 aa25.03■■□□□ 1.6
RPUSD3-201ENST00000383820 MEGF6O75095 1541 aa25.02■■□□□ 1.6
RPUSD3-201ENST00000383820 PRIM1P49642 420 aaKnown RBP25.02■■□□□ 1.6
RPUSD3-201ENST00000383820 SYTL4Q96C24 671 aaPredicted RBP25.01■■□□□ 1.59
RPUSD3-201ENST00000383820 GGNBP2Q9H3C7 697 aa25.01■■□□□ 1.59
RPUSD3-201ENST00000383820 SMG6Q86US8 1419 aaKnown RBP25.01■■□□□ 1.59
RPUSD3-201ENST00000383820 LY75O60449 1722 aa25■■□□□ 1.59
RPUSD3-201ENST00000383820 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
RPUSD3-201ENST00000383820 RRS1Q15050 365 aaKnown RBP25■■□□□ 1.59
RPUSD3-201ENST00000383820 NSD2O96028 1365 aa24.99■■□□□ 1.59
RPUSD3-201ENST00000383820 KIF24Q5T7B8 1368 aa24.99■■□□□ 1.59
RPUSD3-201ENST00000383820 NBPF6Q5VWK0 638 aa24.99■■□□□ 1.59
RPUSD3-201ENST00000383820 NBPF4Q96M43 638 aa24.99■■□□□ 1.59
RPUSD3-201ENST00000383820 KIF20BQ96Q89 1820 aa24.98■■□□□ 1.59
RPUSD3-201ENST00000383820 COL24A1Q17RW2 1714 aa24.98■■□□□ 1.59
RPUSD3-201ENST00000383820 INSRP06213 1382 aa24.97■■□□□ 1.59
RPUSD3-201ENST00000383820 PNPLA7Q6ZV29 1317 aa24.96■■□□□ 1.59
RPUSD3-201ENST00000383820 RAPGEF4Q8WZA2 1011 aa24.96■■□□□ 1.59
RPUSD3-201ENST00000383820 FLT4P35916 1363 aa24.95■■□□□ 1.59
RPUSD3-201ENST00000383820 TFCP2L1Q9NZI6 479 aa24.95■■□□□ 1.58
RPUSD3-201ENST00000383820 TUBGCP6Q96RT7 1819 aa24.94■■□□□ 1.58
RPUSD3-201ENST00000383820 TATP17735 454 aaPredicted RBP24.93■■□□□ 1.58
RPUSD3-201ENST00000383820 POLD1P28340 1107 aa24.93■■□□□ 1.58
RPUSD3-201ENST00000383820 USHBP1Q8N6Y0 703 aa24.92■■□□□ 1.58
RPUSD3-201ENST00000383820 CCNL1Q9UK58 526 aaPredicted RBP24.92■■□□□ 1.58
RPUSD3-201ENST00000383820 CHD4Q14839 1912 aa24.92■■□□□ 1.58
RPUSD3-201ENST00000383820 HMGB2P26583 209 aaKnown RBP24.91■■□□□ 1.58
RPUSD3-201ENST00000383820 KCNQ4P56696 695 aa24.91■■□□□ 1.58
RPUSD3-201ENST00000383820 HSP90AB2PQ58FF8 381 aa24.91■■□□□ 1.58
RPUSD3-201ENST00000383820 TIMELESSQ9UNS1 1208 aa24.91■■□□□ 1.58
RPUSD3-201ENST00000383820 PCDH11XQ9BZA7 1347 aa24.9■■□□□ 1.58
RPUSD3-201ENST00000383820 PCDH11YQ9BZA8 1340 aa24.9■■□□□ 1.58
RPUSD3-201ENST00000383820 ZNF784Q8NCA9 323 aaPredicted RBP24.88■■□□□ 1.57
RPUSD3-201ENST00000383820 CARD14Q9BXL6 1004 aa24.88■■□□□ 1.57
RPUSD3-201ENST00000383820 NSD3Q9BZ95 1437 aa24.86■■□□□ 1.57
RPUSD3-201ENST00000383820 NCAPD2Q15021 1401 aa24.84■■□□□ 1.57
RPUSD3-201ENST00000383820 ANKRD26Q9UPS8 1709 aa24.83■■□□□ 1.57
RPUSD3-201ENST00000383820 GPR162Q16538 588 aa24.83■■□□□ 1.57
RPUSD3-201ENST00000383820 EMILIN1Q9Y6C2 1016 aa24.83■■□□□ 1.57
RPUSD3-201ENST00000383820 PKD1L3Q7Z443 1732 aa24.83■■□□□ 1.57
RPUSD3-201ENST00000383820 C5P01031 1676 aa24.82■■□□□ 1.56
RPUSD3-201ENST00000383820 CYP27B1O15528 508 aa24.82■■□□□ 1.56
RPUSD3-201ENST00000383820 KLHL34Q8N239 644 aa24.82■■□□□ 1.56
RPUSD3-201ENST00000383820 COL23A1Q86Y22 540 aaPredicted RBP24.81■■□□□ 1.56
RPUSD3-201ENST00000383820 CLSPNQ9HAW4 1339 aa24.81■■□□□ 1.56
RPUSD3-201ENST00000383820 PALLDQ8WX93 1383 aa24.8■■□□□ 1.56
RPUSD3-201ENST00000383820 FLAD1Q8NFF5 587 aa24.8■■□□□ 1.56
RPUSD3-201ENST00000383820 MSH5O43196 834 aa24.79■■□□□ 1.56
RPUSD3-201ENST00000383820 SMARCC1Q92922 1105 aaPredicted RBP24.79■■□□□ 1.56
RPUSD3-201ENST00000383820 WASHC2AQ641Q2 1341 aa24.79■■□□□ 1.56
RPUSD3-201ENST00000383820 TAF1LQ8IZX4 1826 aa24.79■■□□□ 1.56
RPUSD3-201ENST00000383820 TOGARAM1Q9Y4F4 1720 aa24.78■■□□□ 1.56
RPUSD3-201ENST00000383820 ITGB4P16144 1822 aa24.78■■□□□ 1.56
RPUSD3-201ENST00000383820 MPRIPQ6WCQ1 1025 aa24.78■■□□□ 1.56
RPUSD3-201ENST00000383820 NKX1-1Q15270 411 aaPredicted RBP24.77■■□□□ 1.56
RPUSD3-201ENST00000383820 SPG7Q9UQ90 795 aa24.77■■□□□ 1.56
RPUSD3-201ENST00000383820 PPM1GO15355 546 aaPredicted RBP24.76■■□□□ 1.55
RPUSD3-201ENST00000383820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.76■■□□□ 1.55
RPUSD3-201ENST00000383820 MAP2P11137 1827 aaKnown RBP24.76■■□□□ 1.55
RPUSD3-201ENST00000383820 NLGN2Q8NFZ4 835 aa24.75■■□□□ 1.55
RPUSD3-201ENST00000383820 UTRNP46939 3433 aa24.75■■□□□ 1.55
RPUSD3-201ENST00000383820 C4BP0C0L5 1744 aa24.73■■□□□ 1.55
RPUSD3-201ENST00000383820 PELP1Q8IZL8 1130 aaKnown RBP24.72■■□□□ 1.55
RPUSD3-201ENST00000383820 PIGBQ92521 554 aa24.72■■□□□ 1.55
RPUSD3-201ENST00000383820 EYA1Q99502 592 aa24.72■■□□□ 1.55
RPUSD3-201ENST00000383820 POLKQ9UBT6 870 aa24.72■■□□□ 1.55
RPUSD3-201ENST00000383820 PLEKHG2Q9H7P9 1386 aa24.71■■□□□ 1.55
RPUSD3-201ENST00000383820 GRIN3BO60391 1043 aa24.7■■□□□ 1.54
RPUSD3-201ENST00000383820 MSL1Q68DK7 614 aa24.7■■□□□ 1.54
RPUSD3-201ENST00000383820 AK7Q96M32 723 aa24.69■■□□□ 1.54
RPUSD3-201ENST00000383820 CD2APQ9Y5K6 639 aa24.69■■□□□ 1.54
RPUSD3-201ENST00000383820 UBR3Q6ZT12 1888 aa24.67■■□□□ 1.54
RPUSD3-201ENST00000383820 IFNL2Q8IZJ0 200 aa24.67■■□□□ 1.54
RPUSD3-201ENST00000383820 TMOD3Q9NYL9 352 aa24.67■■□□□ 1.54
RPUSD3-201ENST00000383820 LOC102724428A0A0B4J2F2 783 aa24.65■■□□□ 1.54
RPUSD3-201ENST00000383820 PHKG2P15735 406 aa24.65■■□□□ 1.54
RPUSD3-201ENST00000383820 YBX3P16989 372 aaKnown RBP eCLIP24.65■■□□□ 1.547e-7■■□□□ 12.7
RPUSD3-201ENST00000383820 SIK1P57059 783 aa24.65■■□□□ 1.54
RPUSD3-201ENST00000383820 C1QTNF8P60827 252 aa24.65■■□□□ 1.54
RPUSD3-201ENST00000383820 SSFA2P28290 1259 aa24.64■■□□□ 1.54
RPUSD3-201ENST00000383820 EIF4A2Q14240 407 aaKnown RBP24.64■■□□□ 1.54
RPUSD3-201ENST00000383820 POLR3GLQ9BT43 218 aa24.63■■□□□ 1.53
RPUSD3-201ENST00000383820 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.62■■□□□ 1.53
RPUSD3-201ENST00000383820 EIF4G2P78344 907 aaKnown RBP eCLIP24.62■■□□□ 1.53
RPUSD3-201ENST00000383820 PCGF6Q9BYE7 350 aa24.62■■□□□ 1.53
RPUSD3-201ENST00000383820 AMIGO3Q86WK7 504 aa24.61■■□□□ 1.53
RPUSD3-201ENST00000383820 IGSF1Q8N6C5 1336 aa24.61■■□□□ 1.53
RPUSD3-201ENST00000383820 TNNT2P45379 298 aaPredicted RBP24.6■■□□□ 1.53
RPUSD3-201ENST00000383820 LINC00116Q8NCU8 138 aa24.6■■□□□ 1.53
RPUSD3-201ENST00000383820 ASAP1Q9ULH1 1129 aa24.6■■□□□ 1.53
RPUSD3-201ENST00000383820 GIGYF1O75420 1035 aaPredicted RBP24.59■■□□□ 1.53
RPUSD3-201ENST00000383820 PHF14O94880 888 aa24.59■■□□□ 1.53
RPUSD3-201ENST00000383820 ATP6V1AP38606 617 aa24.58■■□□□ 1.53
RPUSD3-201ENST00000383820 HSP90AB1P08238 724 aaKnown RBP24.57■■□□□ 1.52
RPUSD3-201ENST00000383820 HSPA5P11021 654 aaKnown RBP24.57■■□□□ 1.52
RPUSD3-201ENST00000383820 ITPK1Q13572 414 aa24.57■■□□□ 1.52
RPUSD3-201ENST00000383820 PANK3Q9H999 370 aa24.57■■□□□ 1.52
RPUSD3-201ENST00000383820 ATG3Q9NT62 314 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms