RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 SYT10Q6XYQ8 523 aa18.04■□□□□ 0.48
VLDLR-202ENST00000382099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.04■□□□□ 0.48
VLDLR-202ENST00000382099 KRBA2Q6ZNG9 492 aa18.04■□□□□ 0.48
VLDLR-202ENST00000382099 TMEM57Q8N5G2 664 aa18.04■□□□□ 0.48
VLDLR-202ENST00000382099 CYP2C19P33261 490 aa18.04■□□□□ 0.48
VLDLR-202ENST00000382099 ELF2Q15723 593 aa18.04■□□□□ 0.48
VLDLR-202ENST00000382099 TSR2Q969E8 191 aaKnown RBP18.04■□□□□ 0.48
VLDLR-202ENST00000382099 C1orf115Q9H7X2 142 aa18.04■□□□□ 0.48
VLDLR-202ENST00000382099 LRMPQ12912 555 aa18.03■□□□□ 0.48
VLDLR-202ENST00000382099 MYCBPQ99417 103 aaPredicted RBP18.03■□□□□ 0.48
VLDLR-202ENST00000382099 PLXNC1O60486 1568 aa18.03■□□□□ 0.48
VLDLR-202ENST00000382099 NPC1L1Q9UHC9 1359 aa18.03■□□□□ 0.48
VLDLR-202ENST00000382099 MMP14P50281 582 aa18.03■□□□□ 0.48
VLDLR-202ENST00000382099 DRC1Q96MC2 740 aa18.03■□□□□ 0.48
VLDLR-202ENST00000382099 TPM3P06753 285 aa18.02■□□□□ 0.48
VLDLR-202ENST00000382099 FBXO38Q6PIJ6 1188 aa18.02■□□□□ 0.48
VLDLR-202ENST00000382099 ATP10AO60312 1499 aa18.02■□□□□ 0.48
VLDLR-202ENST00000382099 TEX35Q5T0J7 233 aa18.02■□□□□ 0.48
VLDLR-202ENST00000382099 ZNF215Q9UL58 517 aaPredicted RBP18.02■□□□□ 0.48
VLDLR-202ENST00000382099 ICE2Q659A1 982 aa18.01■□□□□ 0.47
VLDLR-202ENST00000382099 SYCP1Q15431 976 aa18.01■□□□□ 0.47
VLDLR-202ENST00000382099 CCDC186Q7Z3E2 898 aa18.01■□□□□ 0.47
VLDLR-202ENST00000382099 USP48Q86UV5 1035 aa18.01■□□□□ 0.47
VLDLR-202ENST00000382099 IQGAP1P46940 1657 aa18.01■□□□□ 0.47
VLDLR-202ENST00000382099 RBM6P78332 1123 aaKnown RBP18■□□□□ 0.47
VLDLR-202ENST00000382099 GIMAP6Q6P9H5 292 aa18■□□□□ 0.47
VLDLR-202ENST00000382099 CCDC191Q8NCU4 936 aa18■□□□□ 0.47
VLDLR-202ENST00000382099 NOB1Q9ULX3 412 aaKnown RBP18■□□□□ 0.47
VLDLR-202ENST00000382099 MADDQ8WXG6 1647 aa18■□□□□ 0.47
VLDLR-202ENST00000382099 NOP2P46087 812 aaKnown RBP18■□□□□ 0.47
VLDLR-202ENST00000382099 AXDND1Q5T1B0 1012 aaPredicted RBP18■□□□□ 0.47
VLDLR-202ENST00000382099 MYO1CO00159 1063 aa17.99■□□□□ 0.47
VLDLR-202ENST00000382099 SAFB2Q14151 953 aaKnown RBP eCLIP17.99■□□□□ 0.47
VLDLR-202ENST00000382099 CCDC183Q5T5S1 534 aa17.99■□□□□ 0.47
VLDLR-202ENST00000382099 SAMD1Q6SPF0 538 aaPredicted RBP17.99■□□□□ 0.47
VLDLR-202ENST00000382099 PAXBP1Q9Y5B6 917 aa17.99■□□□□ 0.47
VLDLR-202ENST00000382099 SIRT1Q96EB6 747 aa17.99■□□□□ 0.47
VLDLR-202ENST00000382099 CEP135Q66GS9 1140 aa17.98■□□□□ 0.47
VLDLR-202ENST00000382099 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
VLDLR-202ENST00000382099 CASQ1P31415 396 aa17.98■□□□□ 0.47
VLDLR-202ENST00000382099 GOLGA6L1Q8N7Z2 621 aa17.98■□□□□ 0.47
VLDLR-202ENST00000382099 ZNF622Q969S3 477 aaKnown RBP eCLIP17.98■□□□□ 0.47
VLDLR-202ENST00000382099 NEK4P51957 841 aa17.98■□□□□ 0.47
VLDLR-202ENST00000382099 BMS1Q14692 1282 aaKnown RBP17.98■□□□□ 0.47
VLDLR-202ENST00000382099 LRRFIP2Q9Y608 721 aaKnown RBP17.98■□□□□ 0.47
VLDLR-202ENST00000382099 DUOX2Q9NRD8 1548 aa17.97■□□□□ 0.47
VLDLR-202ENST00000382099 HTATSF1O43719 755 aaKnown RBP17.97■□□□□ 0.47
VLDLR-202ENST00000382099 SART3Q15020 963 aaKnown RBP17.97■□□□□ 0.47
VLDLR-202ENST00000382099 ARHGAP31Q2M1Z3 1444 aa17.97■□□□□ 0.47
VLDLR-202ENST00000382099 MYOM1P52179 1685 aa17.97■□□□□ 0.47
VLDLR-202ENST00000382099 AP5Z1O43299 807 aa17.97■□□□□ 0.47
VLDLR-202ENST00000382099 EXOSC9Q06265 439 aaKnown RBP17.96■□□□□ 0.47
VLDLR-202ENST00000382099 SSH1Q8WYL5 1049 aa17.96■□□□□ 0.47
VLDLR-202ENST00000382099 LCMT1Q9UIC8 334 aa17.96■□□□□ 0.47
VLDLR-202ENST00000382099 NCAPGQ9BPX3 1015 aa17.96■□□□□ 0.47
VLDLR-202ENST00000382099 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.96■□□□□ 0.47
VLDLR-202ENST00000382099 BCCIPQ9P287 314 aaKnown RBP eCLIP17.96■□□□□ 0.47
VLDLR-202ENST00000382099 ANKRD36BQ8N2N9 1353 aa17.96■□□□□ 0.47
VLDLR-202ENST00000382099 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
VLDLR-202ENST00000382099 SLC26A8Q96RN1 970 aa17.96■□□□□ 0.47
VLDLR-202ENST00000382099 APBB1O00213 710 aa17.95■□□□□ 0.46
VLDLR-202ENST00000382099 SYNMO15061 1565 aa17.95■□□□□ 0.46
VLDLR-202ENST00000382099 CTR9Q6PD62 1173 aa17.95■□□□□ 0.46
VLDLR-202ENST00000382099 CHMP3Q9Y3E7 222 aa17.95■□□□□ 0.46
VLDLR-202ENST00000382099 CLASP1Q7Z460 1538 aa17.94■□□□□ 0.46
VLDLR-202ENST00000382099 POLKQ9UBT6 870 aa17.94■□□□□ 0.46
VLDLR-202ENST00000382099 REC8O95072 547 aa17.94■□□□□ 0.46
VLDLR-202ENST00000382099 TXLNBQ8N3L3 684 aa17.94■□□□□ 0.46
VLDLR-202ENST00000382099 ZBTB40Q9NUA8 1239 aa17.94■□□□□ 0.46
VLDLR-202ENST00000382099 ASXL1Q8IXJ9 1541 aa17.94■□□□□ 0.46
VLDLR-202ENST00000382099 CT47A1Q5JQC4 288 aaPredicted RBP17.94■□□□□ 0.46
VLDLR-202ENST00000382099 CREBRFQ8IUR6 639 aa17.94■□□□□ 0.46
VLDLR-202ENST00000382099 USP26Q9BXU7 913 aa17.94■□□□□ 0.46
VLDLR-202ENST00000382099 NRBP1Q9UHY1 535 aa17.94■□□□□ 0.46
VLDLR-202ENST00000382099 FIBPO43427 364 aa17.93■□□□□ 0.46
VLDLR-202ENST00000382099 TMX3Q96JJ7 454 aa17.93■□□□□ 0.46
VLDLR-202ENST00000382099 ZSCAN26Q16670 478 aa17.93■□□□□ 0.46
VLDLR-202ENST00000382099 MX1P20591 662 aa17.93■□□□□ 0.46
VLDLR-202ENST00000382099 GPS2Q13227 327 aa17.93■□□□□ 0.46
VLDLR-202ENST00000382099 E2F4Q16254 413 aa17.93■□□□□ 0.46
VLDLR-202ENST00000382099 TRIM5Q9C035 493 aa17.93■□□□□ 0.46
VLDLR-202ENST00000382099 ZNF446Q9NWS9 450 aa17.93■□□□□ 0.46
VLDLR-202ENST00000382099 TRMT1Q9NXH9 659 aaKnown RBP17.93■□□□□ 0.46
VLDLR-202ENST00000382099 CWC15Q9P013 229 aaKnown RBP17.93■□□□□ 0.46
VLDLR-202ENST00000382099 BRD1O95696 1058 aa17.92■□□□□ 0.46
VLDLR-202ENST00000382099 WDR63Q8IWG1 891 aa17.92■□□□□ 0.46
VLDLR-202ENST00000382099 JRKLQ9Y4A0 524 aa17.92■□□□□ 0.46
VLDLR-202ENST00000382099 CASC1Q6TDU7 716 aa17.92■□□□□ 0.46
VLDLR-202ENST00000382099 PIK3C2GO75747 1445 aa17.92■□□□□ 0.46
VLDLR-202ENST00000382099 KIF3BO15066 747 aa17.91■□□□□ 0.46
VLDLR-202ENST00000382099 DEF6Q9H4E7 631 aa17.91■□□□□ 0.46
VLDLR-202ENST00000382099 SPHKAPQ2M3C7 1700 aa17.91■□□□□ 0.46
VLDLR-202ENST00000382099 CCDC27Q2M243 656 aa17.91■□□□□ 0.46
VLDLR-202ENST00000382099 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.91■□□□□ 0.46
VLDLR-202ENST00000382099 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
VLDLR-202ENST00000382099 INTS3Q68E01 1043 aaKnown RBP17.91■□□□□ 0.46
VLDLR-202ENST00000382099 CNPY2Q9Y2B0 182 aa17.91■□□□□ 0.46
VLDLR-202ENST00000382099 TPM4P67936 248 aa17.9■□□□□ 0.46
VLDLR-202ENST00000382099 ST5P78524 1137 aa17.9■□□□□ 0.46
VLDLR-202ENST00000382099 PTPN14Q15678 1187 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms