RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 NBPF14Q5TI25 921 aa21.83■■□□□ 1.09
SNRPB-201ENST00000381342 EYA1Q99502 592 aa21.82■■□□□ 1.08
SNRPB-201ENST00000381342 BCL11BQ9C0K0 894 aaPredicted RBP21.82■■□□□ 1.08
SNRPB-201ENST00000381342 PKD1L3Q7Z443 1732 aa21.82■■□□□ 1.08
SNRPB-201ENST00000381342 TNS1Q9HBL0 1735 aaKnown RBP21.82■■□□□ 1.08
SNRPB-201ENST00000381342 IGSF1Q8N6C5 1336 aa21.8■■□□□ 1.08
SNRPB-201ENST00000381342 PSDA5PKW4 1024 aaPredicted RBP21.79■■□□□ 1.08
SNRPB-201ENST00000381342 IL13P35225 146 aa21.79■■□□□ 1.08
SNRPB-201ENST00000381342 RALBP1Q15311 655 aa21.79■■□□□ 1.08
SNRPB-201ENST00000381342 PLSCR1O15162 318 aa21.78■■□□□ 1.08
SNRPB-201ENST00000381342 BCL9O00512 1426 aa21.78■■□□□ 1.08
SNRPB-201ENST00000381342 R3HDM1Q15032 1099 aaKnown RBP21.77■■□□□ 1.08
SNRPB-201ENST00000381342 DDX54Q8TDD1 881 aaKnown RBP21.77■■□□□ 1.08
SNRPB-201ENST00000381342 DIAPH1O60610 1272 aaKnown RBP21.76■■□□□ 1.07
SNRPB-201ENST00000381342 RAPGEF4Q8WZA2 1011 aa21.76■■□□□ 1.07
SNRPB-201ENST00000381342 CFAP53Q96M91 514 aa21.76■■□□□ 1.07
SNRPB-201ENST00000381342 PRKRIP1Q9H875 184 aaPredicted RBP21.76■■□□□ 1.07
SNRPB-201ENST00000381342 MYBBP1AQ9BQG0 1328 aaKnown RBP21.76■■□□□ 1.07
SNRPB-201ENST00000381342 SBF2Q86WG5 1849 aa21.76■■□□□ 1.07
SNRPB-201ENST00000381342 TATP17735 454 aaPredicted RBP21.74■■□□□ 1.07
SNRPB-201ENST00000381342 AEBP1Q8IUX7 1158 aa21.74■■□□□ 1.07
SNRPB-201ENST00000381342 ACSBG1Q96GR2 724 aa21.74■■□□□ 1.07
SNRPB-201ENST00000381342 ZCRB1Q8TBF4 217 aaKnown RBP21.73■■□□□ 1.07
SNRPB-201ENST00000381342 DOT1LQ8TEK3 1739 aa21.72■■□□□ 1.07
SNRPB-201ENST00000381342 KDRP35968 1356 aa21.72■■□□□ 1.07
SNRPB-201ENST00000381342 SULT6B1Q6IMI4 303 aa21.71■■□□□ 1.07
SNRPB-201ENST00000381342 U2SURPO15042 1029 aaKnown RBP21.7■■□□□ 1.06
SNRPB-201ENST00000381342 KCNQ2O43526 872 aa21.69■■□□□ 1.06
SNRPB-201ENST00000381342 HMOX1P09601 288 aa21.69■■□□□ 1.06
SNRPB-201ENST00000381342 PTF1AQ7RTS3 328 aa21.69■■□□□ 1.06
SNRPB-201ENST00000381342 NHSQ6T4R5 1651 aa21.69■■□□□ 1.06
SNRPB-201ENST00000381342 TOGARAM1Q9Y4F4 1720 aa21.68■■□□□ 1.06
SNRPB-201ENST00000381342 KAT6BQ8WYB5 2073 aa21.68■■□□□ 1.06
SNRPB-201ENST00000381342 PCDH11XQ9BZA7 1347 aa21.66■■□□□ 1.06
SNRPB-201ENST00000381342 PCDH11YQ9BZA8 1340 aa21.66■■□□□ 1.06
SNRPB-201ENST00000381342 TXNRD1Q16881 649 aa21.66■■□□□ 1.06
SNRPB-201ENST00000381342 SYTL4Q96C24 671 aaPredicted RBP21.66■■□□□ 1.06
SNRPB-201ENST00000381342 PLEKHG2Q9H7P9 1386 aa21.65■■□□□ 1.06
SNRPB-201ENST00000381342 ANP32CO43423 234 aa21.65■■□□□ 1.06
SNRPB-201ENST00000381342 RREB1Q92766 1687 aa21.65■■□□□ 1.06
SNRPB-201ENST00000381342 NUDCQ9Y266 331 aa21.64■■□□□ 1.05
SNRPB-201ENST00000381342 VIRMAQ69YN4 1812 aaKnown RBP21.64■■□□□ 1.05
SNRPB-201ENST00000381342 STK32BQ9NY57 414 aa21.63■■□□□ 1.05
SNRPB-201ENST00000381342 SPG7Q9UQ90 795 aa21.63■■□□□ 1.05
SNRPB-201ENST00000381342 RGPD3A6NKT7 1758 aaPredicted RBP21.63■■□□□ 1.05
SNRPB-201ENST00000381342 RGPD4Q7Z3J3 1758 aa21.63■■□□□ 1.05
SNRPB-201ENST00000381342 CYP27B1O15528 508 aa21.62■■□□□ 1.05
SNRPB-201ENST00000381342 U2AF1L5P0DN76 240 aaPredicted RBP21.62■■□□□ 1.05
SNRPB-201ENST00000381342 U2AF1Q01081 240 aaKnown RBP eCLIP21.62■■□□□ 1.05
SNRPB-201ENST00000381342 BTAF1O14981 1849 aa21.62■■□□□ 1.05
SNRPB-201ENST00000381342 NUP188Q5SRE5 1749 aa21.61■■□□□ 1.05
SNRPB-201ENST00000381342 PROM2Q8N271 834 aa21.61■■□□□ 1.05
SNRPB-201ENST00000381342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.61■■□□□ 1.05
SNRPB-201ENST00000381342 ITGB4P16144 1822 aa21.61■■□□□ 1.05
SNRPB-201ENST00000381342 PRIM1P49642 420 aaKnown RBP21.6■■□□□ 1.05
SNRPB-201ENST00000381342 RSPH6AQ9H0K4 717 aa21.59■■□□□ 1.05
SNRPB-201ENST00000381342 PRKAR2BP31323 418 aa21.58■■□□□ 1.05
SNRPB-201ENST00000381342 PLEKHO1Q53GL0 409 aaPredicted RBP21.58■■□□□ 1.05
SNRPB-201ENST00000381342 ZNF530Q6P9A1 599 aaPredicted RBP21.58■■□□□ 1.05
SNRPB-201ENST00000381342 SCN11AQ9UI33 1791 aa21.57■■□□□ 1.04
SNRPB-201ENST00000381342 PHKG2P15735 406 aa21.57■■□□□ 1.04
SNRPB-201ENST00000381342 AMOTQ4VCS5 1084 aa21.57■■□□□ 1.04
SNRPB-201ENST00000381342 SPON1Q9HCB6 807 aa21.56■■□□□ 1.04
SNRPB-201ENST00000381342 LRP5O75197 1615 aa21.55■■□□□ 1.04
SNRPB-201ENST00000381342 SLC15A2Q16348 729 aa21.55■■□□□ 1.04
SNRPB-201ENST00000381342 CCDC184Q52MB2 194 aa21.55■■□□□ 1.04
SNRPB-201ENST00000381342 SLC27A3Q5K4L6 730 aa21.55■■□□□ 1.04
SNRPB-201ENST00000381342 IFNL2Q8IZJ0 200 aa21.55■■□□□ 1.04
SNRPB-201ENST00000381342 ANO8Q9HCE9 1232 aaPredicted RBP21.55■■□□□ 1.04
SNRPB-201ENST00000381342 KDM6AO15550 1401 aaPredicted RBP21.55■■□□□ 1.04
SNRPB-201ENST00000381342 HMGB2P26583 209 aaKnown RBP21.54■■□□□ 1.04
SNRPB-201ENST00000381342 PPP1R1BQ9UD71 204 aaPredicted RBP21.54■■□□□ 1.04
SNRPB-201ENST00000381342 DLG5Q8TDM6 1919 aa21.54■■□□□ 1.04
SNRPB-201ENST00000381342 ADAMTS7Q9UKP4 1686 aa21.53■■□□□ 1.04
SNRPB-201ENST00000381342 FCHSD2O94868 740 aa21.53■■□□□ 1.04
SNRPB-201ENST00000381342 MTHFSDQ2M296 383 aaKnown RBP21.53■■□□□ 1.04
SNRPB-201ENST00000381342 C1orf141Q5JVX7 400 aa21.53■■□□□ 1.04
SNRPB-201ENST00000381342 WDR43Q15061 677 aaKnown RBP eCLIP21.52■■□□□ 1.04
SNRPB-201ENST00000381342 NKX1-1Q15270 411 aaPredicted RBP21.52■■□□□ 1.04
SNRPB-201ENST00000381342 PHACTR3Q96KR7 559 aa21.52■■□□□ 1.04
SNRPB-201ENST00000381342 MPRIPQ6WCQ1 1025 aa21.5■■□□□ 1.03
SNRPB-201ENST00000381342 AKAP4Q5JQC9 854 aa21.49■■□□□ 1.03
SNRPB-201ENST00000381342 MAP3K5Q99683 1374 aa21.48■■□□□ 1.03
SNRPB-201ENST00000381342 GAS2L2Q8NHY3 880 aa21.48■■□□□ 1.03
SNRPB-201ENST00000381342 MRS2Q9HD23 443 aa21.48■■□□□ 1.03
SNRPB-201ENST00000381342 CCNL1Q9UK58 526 aaPredicted RBP21.48■■□□□ 1.03
SNRPB-201ENST00000381342 MRC1P22897 1456 aa21.47■■□□□ 1.03
SNRPB-201ENST00000381342 LY75O60449 1722 aa21.47■■□□□ 1.03
SNRPB-201ENST00000381342 HSP90AB1P08238 724 aaKnown RBP21.47■■□□□ 1.03
SNRPB-201ENST00000381342 DIEXFQ68CQ4 756 aaKnown RBP21.47■■□□□ 1.03
SNRPB-201ENST00000381342 SMARCC1Q92922 1105 aaPredicted RBP21.47■■□□□ 1.03
SNRPB-201ENST00000381342 DCAF5Q96JK2 942 aa21.47■■□□□ 1.03
SNRPB-201ENST00000381342 PLEKHF1Q96S99 279 aa21.47■■□□□ 1.03
SNRPB-201ENST00000381342 LRRC4BQ9NT99 713 aa21.46■■□□□ 1.03
SNRPB-201ENST00000381342 SIPA1L3O60292 1781 aaPredicted RBP21.46■■□□□ 1.03
SNRPB-201ENST00000381342 ZBTB7AO95365 584 aa21.45■■□□□ 1.02
SNRPB-201ENST00000381342 CCDC146Q8IYE0 955 aa21.45■■□□□ 1.02
SNRPB-201ENST00000381342 ADAMTS8Q9UP79 889 aa21.45■■□□□ 1.02
SNRPB-201ENST00000381342 MAPK8IP3Q9UPT6 1336 aa21.45■■□□□ 1.02
SNRPB-201ENST00000381342 TMOD3Q9NYL9 352 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms