RNA–Protein interactions for RNA: ENST00000381158.3

RAB3C-202, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB3C, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-202ENST00000381158 PDGFDQ9GZP0 370 aaPredicted RBP12.67□□□□□ -0.38
RAB3C-202ENST00000381158 LY75O60449 1722 aa12.67□□□□□ -0.38
RAB3C-202ENST00000381158 ANKRD36BQ8N2N9 1353 aa12.67□□□□□ -0.38
RAB3C-202ENST00000381158 FBLN1P23142 703 aa12.66□□□□□ -0.38
RAB3C-202ENST00000381158 SPON1Q9HCB6 807 aa12.66□□□□□ -0.38
RAB3C-202ENST00000381158 COL24A1Q17RW2 1714 aa12.65□□□□□ -0.38
RAB3C-202ENST00000381158 ACSBG1Q96GR2 724 aa12.65□□□□□ -0.38
RAB3C-202ENST00000381158 USP47Q96K76 1375 aa12.65□□□□□ -0.38
RAB3C-202ENST00000381158 MAP3K19Q56UN5 1328 aa12.64□□□□□ -0.39
RAB3C-202ENST00000381158 ANKRD26Q9UPS8 1709 aa12.64□□□□□ -0.39
RAB3C-202ENST00000381158 MAP2P11137 1827 aaKnown RBP12.63□□□□□ -0.39
RAB3C-202ENST00000381158 SLC24A1O60721 1099 aa12.63□□□□□ -0.39
RAB3C-202ENST00000381158 HOXC9P31274 260 aa12.63□□□□□ -0.39
RAB3C-202ENST00000381158 FKBP8Q14318 412 aa12.63□□□□□ -0.39
RAB3C-202ENST00000381158 COG3Q96JB2 828 aa12.63□□□□□ -0.39
RAB3C-202ENST00000381158 FYB1O15117 783 aa12.62□□□□□ -0.39
RAB3C-202ENST00000381158 PTGER2P43116 358 aa12.62□□□□□ -0.39
RAB3C-202ENST00000381158 SLC15A2Q16348 729 aa12.62□□□□□ -0.39
RAB3C-202ENST00000381158 LTV1Q96GA3 475 aaPredicted RBP12.62□□□□□ -0.39
RAB3C-202ENST00000381158 MEGF6O75095 1541 aa12.62□□□□□ -0.39
RAB3C-202ENST00000381158 RTL1A6NKG5 1358 aa12.61□□□□□ -0.39
RAB3C-202ENST00000381158 ITGB4P16144 1822 aa12.61□□□□□ -0.39
RAB3C-202ENST00000381158 TMF1P82094 1093 aa12.61□□□□□ -0.39
RAB3C-202ENST00000381158 STK32BQ9NY57 414 aa12.61□□□□□ -0.39
RAB3C-202ENST00000381158 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
RAB3C-202ENST00000381158 ZBTB7AO95365 584 aa12.6□□□□□ -0.39
RAB3C-202ENST00000381158 GGNBP2Q9H3C7 697 aa12.6□□□□□ -0.39
RAB3C-202ENST00000381158 PPP1R1BQ9UD71 204 aaPredicted RBP12.6□□□□□ -0.39
RAB3C-202ENST00000381158 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
RAB3C-202ENST00000381158 NSD2O96028 1365 aa12.59□□□□□ -0.39
RAB3C-202ENST00000381158 AMPHP49418 695 aa12.59□□□□□ -0.39
RAB3C-202ENST00000381158 RRS1Q15050 365 aaKnown RBP12.59□□□□□ -0.39
RAB3C-202ENST00000381158 LRRC4BQ9NT99 713 aa12.59□□□□□ -0.39
RAB3C-202ENST00000381158 TOGARAM1Q9Y4F4 1720 aa12.59□□□□□ -0.39
RAB3C-202ENST00000381158 CHD4Q14839 1912 aa12.58□□□□□ -0.39
RAB3C-202ENST00000381158 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
RAB3C-202ENST00000381158 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
RAB3C-202ENST00000381158 ZNF827Q17R98 1081 aa12.57□□□□□ -0.4
RAB3C-202ENST00000381158 NBPF6Q5VWK0 638 aa12.57□□□□□ -0.4
RAB3C-202ENST00000381158 NBPF4Q96M43 638 aa12.57□□□□□ -0.4
RAB3C-202ENST00000381158 CARD14Q9BXL6 1004 aa12.57□□□□□ -0.4
RAB3C-202ENST00000381158 C5P01031 1676 aa12.57□□□□□ -0.4
RAB3C-202ENST00000381158 MTFR1LQ9H019 292 aa12.56□□□□□ -0.4
RAB3C-202ENST00000381158 INSRP06213 1382 aa12.56□□□□□ -0.4
RAB3C-202ENST00000381158 PRIM1P49642 420 aaKnown RBP12.55□□□□□ -0.4
RAB3C-202ENST00000381158 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
RAB3C-202ENST00000381158 ZCRB1Q8TBF4 217 aaKnown RBP12.55□□□□□ -0.4
RAB3C-202ENST00000381158 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
RAB3C-202ENST00000381158 KIF24Q5T7B8 1368 aa12.55□□□□□ -0.4
RAB3C-202ENST00000381158 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
RAB3C-202ENST00000381158 HSP90AB2PQ58FF8 381 aa12.54□□□□□ -0.4
RAB3C-202ENST00000381158 TIMELESSQ9UNS1 1208 aa12.54□□□□□ -0.4
RAB3C-202ENST00000381158 FLT4P35916 1363 aa12.54□□□□□ -0.4
RAB3C-202ENST00000381158 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
RAB3C-202ENST00000381158 KCNQ4P56696 695 aa12.53□□□□□ -0.4
RAB3C-202ENST00000381158 CDCA8Q53HL2 280 aa12.53□□□□□ -0.4
RAB3C-202ENST00000381158 SLC27A3Q5K4L6 730 aa12.53□□□□□ -0.4
RAB3C-202ENST00000381158 SMG6Q86US8 1419 aaKnown RBP12.53□□□□□ -0.4
RAB3C-202ENST00000381158 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
RAB3C-202ENST00000381158 YY1P25490 414 aa12.52□□□□□ -0.41
RAB3C-202ENST00000381158 SYTL4Q96C24 671 aaPredicted RBP12.52□□□□□ -0.41
RAB3C-202ENST00000381158 SYT17Q9BSW7 474 aa12.52□□□□□ -0.41
RAB3C-202ENST00000381158 FHDC1Q9C0D6 1143 aaPredicted RBP12.52□□□□□ -0.41
RAB3C-202ENST00000381158 CGNL1Q0VF96 1302 aa12.52□□□□□ -0.41
RAB3C-202ENST00000381158 PNPLA7Q6ZV29 1317 aa12.52□□□□□ -0.41
RAB3C-202ENST00000381158 CLSPNQ9HAW4 1339 aa12.52□□□□□ -0.41
RAB3C-202ENST00000381158 UBR3Q6ZT12 1888 aa12.51□□□□□ -0.41
RAB3C-202ENST00000381158 EMILIN1Q9Y6C2 1016 aa12.51□□□□□ -0.41
RAB3C-202ENST00000381158 MAP3K5Q99683 1374 aa12.5□□□□□ -0.41
RAB3C-202ENST00000381158 C4BP0C0L5 1744 aa12.49□□□□□ -0.41
RAB3C-202ENST00000381158 TATP17735 454 aaPredicted RBP12.49□□□□□ -0.41
RAB3C-202ENST00000381158 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
RAB3C-202ENST00000381158 ARXQ96QS3 562 aa12.49□□□□□ -0.41
RAB3C-202ENST00000381158 PCDH11XQ9BZA7 1347 aa12.48□□□□□ -0.41
RAB3C-202ENST00000381158 PCDH11YQ9BZA8 1340 aa12.48□□□□□ -0.41
RAB3C-202ENST00000381158 CYP27B1O15528 508 aa12.48□□□□□ -0.41
RAB3C-202ENST00000381158 SLC16A10Q8TF71 515 aa12.48□□□□□ -0.41
RAB3C-202ENST00000381158 WASHC2AQ641Q2 1341 aa12.47□□□□□ -0.41
RAB3C-202ENST00000381158 PCGF6Q9BYE7 350 aa12.47□□□□□ -0.41
RAB3C-202ENST00000381158 CCNL1Q9UK58 526 aaPredicted RBP12.47□□□□□ -0.41
RAB3C-202ENST00000381158 TFCP2L1Q9NZI6 479 aa12.46□□□□□ -0.41
RAB3C-202ENST00000381158 POLKQ9UBT6 870 aa12.45□□□□□ -0.42
RAB3C-202ENST00000381158 VIRMAQ69YN4 1812 aaKnown RBP12.45□□□□□ -0.42
RAB3C-202ENST00000381158 PALLDQ8WX93 1383 aa12.44□□□□□ -0.42
RAB3C-202ENST00000381158 NKX1-1Q15270 411 aaPredicted RBP12.44□□□□□ -0.42
RAB3C-202ENST00000381158 COL23A1Q86Y22 540 aaPredicted RBP12.44□□□□□ -0.42
RAB3C-202ENST00000381158 EYA1Q99502 592 aa12.44□□□□□ -0.42
RAB3C-202ENST00000381158 ZNF831Q5JPB2 1677 aa12.43□□□□□ -0.42
RAB3C-202ENST00000381158 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
RAB3C-202ENST00000381158 PPM1GO15355 546 aaPredicted RBP12.43□□□□□ -0.42
RAB3C-202ENST00000381158 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
RAB3C-202ENST00000381158 HSPA5P11021 654 aaKnown RBP12.43□□□□□ -0.42
RAB3C-202ENST00000381158 SPDYE2Q495Y8 402 aa12.43□□□□□ -0.42
RAB3C-202ENST00000381158 MPRIPQ6WCQ1 1025 aa12.43□□□□□ -0.42
RAB3C-202ENST00000381158 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
RAB3C-202ENST00000381158 POLD1P28340 1107 aa12.41□□□□□ -0.42
RAB3C-202ENST00000381158 EIF4G2P78344 907 aaKnown RBP eCLIP12.41□□□□□ -0.42
RAB3C-202ENST00000381158 EIF4A2Q14240 407 aaKnown RBP12.41□□□□□ -0.42
RAB3C-202ENST00000381158 PIGBQ92521 554 aa12.41□□□□□ -0.42
RAB3C-202ENST00000381158 POLR3GLQ9BT43 218 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms