RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 SULT6B1Q6IMI4 303 aa26.86■■□□□ 1.89
CDPF1-202ENST00000381037 ZCRB1Q8TBF4 217 aaKnown RBP26.86■■□□□ 1.89
CDPF1-202ENST00000381037 UPF1Q92900 1129 aaKnown RBP eCLIP26.86■■□□□ 1.89
CDPF1-202ENST00000381037 PLEKHG2Q9H7P9 1386 aa26.85■■□□□ 1.89
CDPF1-202ENST00000381037 BCL9O00512 1426 aa26.85■■□□□ 1.89
CDPF1-202ENST00000381037 FAM196AQ6ZSG2 479 aa26.84■■□□□ 1.89
CDPF1-202ENST00000381037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.83■■□□□ 1.89
CDPF1-202ENST00000381037 SHANK3Q9BYB0 1731 aa26.83■■□□□ 1.89
CDPF1-202ENST00000381037 PKD1L3Q7Z443 1732 aa26.8■■□□□ 1.88
CDPF1-202ENST00000381037 HMOX1P09601 288 aa26.79■■□□□ 1.88
CDPF1-202ENST00000381037 DDX54Q8TDD1 881 aaKnown RBP26.79■■□□□ 1.88
CDPF1-202ENST00000381037 U2SURPO15042 1029 aaKnown RBP26.79■■□□□ 1.88
CDPF1-202ENST00000381037 CYP27B1O15528 508 aa26.79■■□□□ 1.88
CDPF1-202ENST00000381037 NUDCQ9Y266 331 aa26.78■■□□□ 1.88
CDPF1-202ENST00000381037 PCDH11XQ9BZA7 1347 aa26.77■■□□□ 1.88
CDPF1-202ENST00000381037 PCDH11YQ9BZA8 1340 aa26.77■■□□□ 1.88
CDPF1-202ENST00000381037 CCDC125Q86Z20 511 aa26.76■■□□□ 1.87
CDPF1-202ENST00000381037 SPG7Q9UQ90 795 aa26.76■■□□□ 1.87
CDPF1-202ENST00000381037 ANP32CO43423 234 aa26.73■■□□□ 1.87
CDPF1-202ENST00000381037 AMOTQ4VCS5 1084 aa26.73■■□□□ 1.87
CDPF1-202ENST00000381037 RSPH6AQ9H0K4 717 aa26.73■■□□□ 1.87
CDPF1-202ENST00000381037 TRIM37O94972 964 aa26.72■■□□□ 1.87
CDPF1-202ENST00000381037 U2AF1L5P0DN76 240 aaPredicted RBP26.72■■□□□ 1.87
CDPF1-202ENST00000381037 U2AF1Q01081 240 aaKnown RBP eCLIP26.72■■□□□ 1.87
CDPF1-202ENST00000381037 PLEKHO1Q53GL0 409 aaPredicted RBP26.72■■□□□ 1.87
CDPF1-202ENST00000381037 NKX1-1Q15270 411 aaPredicted RBP26.72■■□□□ 1.87
CDPF1-202ENST00000381037 SBF2Q86WG5 1849 aa26.71■■□□□ 1.87
CDPF1-202ENST00000381037 PTF1AQ7RTS3 328 aa26.71■■□□□ 1.87
CDPF1-202ENST00000381037 FCHSD2O94868 740 aa26.7■■□□□ 1.86
CDPF1-202ENST00000381037 PHKG2P15735 406 aa26.7■■□□□ 1.86
CDPF1-202ENST00000381037 KCNQ2O43526 872 aa26.68■■□□□ 1.86
CDPF1-202ENST00000381037 IFNL2Q8IZJ0 200 aa26.68■■□□□ 1.86
CDPF1-202ENST00000381037 BCL11BQ9C0K0 894 aaPredicted RBP26.68■■□□□ 1.86
CDPF1-202ENST00000381037 TNS1Q9HBL0 1735 aaKnown RBP26.67■■□□□ 1.86
CDPF1-202ENST00000381037 PRKAR2BP31323 418 aa26.67■■□□□ 1.86
CDPF1-202ENST00000381037 CCDC184Q52MB2 194 aa26.67■■□□□ 1.86
CDPF1-202ENST00000381037 ACSBG1Q96GR2 724 aa26.66■■□□□ 1.86
CDPF1-202ENST00000381037 PHACTR3Q96KR7 559 aa26.66■■□□□ 1.86
CDPF1-202ENST00000381037 MTHFSDQ2M296 383 aaKnown RBP26.65■■□□□ 1.86
CDPF1-202ENST00000381037 ZNF530Q6P9A1 599 aaPredicted RBP26.65■■□□□ 1.86
CDPF1-202ENST00000381037 NHSQ6T4R5 1651 aa26.64■■□□□ 1.86
CDPF1-202ENST00000381037 PRIM1P49642 420 aaKnown RBP26.62■■□□□ 1.85
CDPF1-202ENST00000381037 PLEKHF1Q96S99 279 aa26.62■■□□□ 1.85
CDPF1-202ENST00000381037 SF3B2Q13435 895 aaKnown RBP26.61■■□□□ 1.85
CDPF1-202ENST00000381037 DEFB132Q7Z7B7 95 aa26.61■■□□□ 1.85
CDPF1-202ENST00000381037 DOT1LQ8TEK3 1739 aa26.61■■□□□ 1.85
CDPF1-202ENST00000381037 APBA3O96018 575 aa26.61■■□□□ 1.85
CDPF1-202ENST00000381037 TOGARAM1Q9Y4F4 1720 aa26.6■■□□□ 1.85
CDPF1-202ENST00000381037 AKAP4Q5JQC9 854 aa26.6■■□□□ 1.85
CDPF1-202ENST00000381037 KDM6AO15550 1401 aaPredicted RBP26.59■■□□□ 1.85
CDPF1-202ENST00000381037 HSP90AB1P08238 724 aaKnown RBP26.59■■□□□ 1.85
CDPF1-202ENST00000381037 DCAF5Q96JK2 942 aa26.59■■□□□ 1.85
CDPF1-202ENST00000381037 C1orf141Q5JVX7 400 aa26.58■■□□□ 1.85
CDPF1-202ENST00000381037 BAG6P46379 1132 aa26.57■■□□□ 1.84
CDPF1-202ENST00000381037 CAMKK2Q96RR4 588 aa26.57■■□□□ 1.84
CDPF1-202ENST00000381037 ADAMTS8Q9UP79 889 aa26.57■■□□□ 1.84
CDPF1-202ENST00000381037 PLSCR1O15162 318 aa26.57■■□□□ 1.84
CDPF1-202ENST00000381037 EN1Q05925 392 aaPredicted RBP26.57■■□□□ 1.84
CDPF1-202ENST00000381037 GAS2L2Q8NHY3 880 aa26.57■■□□□ 1.84
CDPF1-202ENST00000381037 MPRIPQ6WCQ1 1025 aa26.56■■□□□ 1.84
CDPF1-202ENST00000381037 SYTL4Q96C24 671 aaPredicted RBP26.56■■□□□ 1.84
CDPF1-202ENST00000381037 KAT6BQ8WYB5 2073 aa26.55■■□□□ 1.84
CDPF1-202ENST00000381037 ERVV-2B6SEH9 535 aa26.54■■□□□ 1.84
CDPF1-202ENST00000381037 WDR43Q15061 677 aaKnown RBP eCLIP26.54■■□□□ 1.84
CDPF1-202ENST00000381037 BTAF1O14981 1849 aa26.54■■□□□ 1.84
CDPF1-202ENST00000381037 PNISRQ8TF01 805 aaKnown RBP26.54■■□□□ 1.84
CDPF1-202ENST00000381037 PNNQ9H307 717 aaKnown RBP26.54■■□□□ 1.84
CDPF1-202ENST00000381037 ADAMTS7Q9UKP4 1686 aa26.53■■□□□ 1.84
CDPF1-202ENST00000381037 PIGBQ92521 554 aa26.53■■□□□ 1.84
CDPF1-202ENST00000381037 MRS2Q9HD23 443 aa26.53■■□□□ 1.84
CDPF1-202ENST00000381037 EZH2Q15910 746 aaKnown RBP26.52■■□□□ 1.84
CDPF1-202ENST00000381037 DIEXFQ68CQ4 756 aaKnown RBP26.52■■□□□ 1.84
CDPF1-202ENST00000381037 LGR6Q9HBX8 967 aa26.52■■□□□ 1.84
CDPF1-202ENST00000381037 ITGB4P16144 1822 aa26.51■■□□□ 1.84
CDPF1-202ENST00000381037 GNAT3A8MTJ3 354 aa26.51■■□□□ 1.83
CDPF1-202ENST00000381037 PROM2Q8N271 834 aa26.51■■□□□ 1.83
CDPF1-202ENST00000381037 MAP3K5Q99683 1374 aa26.5■■□□□ 1.83
CDPF1-202ENST00000381037 RNMTO43148 476 aaKnown RBP26.5■■□□□ 1.83
CDPF1-202ENST00000381037 IL17REQ8NFR9 667 aa26.5■■□□□ 1.83
CDPF1-202ENST00000381037 RGPD3A6NKT7 1758 aaPredicted RBP26.49■■□□□ 1.83
CDPF1-202ENST00000381037 RGPD4Q7Z3J3 1758 aa26.49■■□□□ 1.83
CDPF1-202ENST00000381037 SCN11AQ9UI33 1791 aa26.49■■□□□ 1.83
CDPF1-202ENST00000381037 TMOD3Q9NYL9 352 aa26.48■■□□□ 1.83
CDPF1-202ENST00000381037 NEFMP07197 916 aa26.47■■□□□ 1.83
CDPF1-202ENST00000381037 NFE2L2Q16236 605 aa26.47■■□□□ 1.83
CDPF1-202ENST00000381037 NFATC2IPQ8NCF5 419 aa26.47■■□□□ 1.83
CDPF1-202ENST00000381037 CEMIPQ8WUJ3 1361 aa26.46■■□□□ 1.83
CDPF1-202ENST00000381037 MRC1P22897 1456 aa26.46■■□□□ 1.83
CDPF1-202ENST00000381037 CABP4P57796 275 aa26.46■■□□□ 1.83
CDPF1-202ENST00000381037 CCDC146Q8IYE0 955 aa26.46■■□□□ 1.83
CDPF1-202ENST00000381037 RUNDC1Q96C34 613 aa26.46■■□□□ 1.83
CDPF1-202ENST00000381037 MAPK8IP3Q9UPT6 1336 aa26.46■■□□□ 1.83
CDPF1-202ENST00000381037 SLC52A2Q9HAB3 445 aa26.45■■□□□ 1.82
CDPF1-202ENST00000381037 HTATSF1O43719 755 aaKnown RBP26.44■■□□□ 1.82
CDPF1-202ENST00000381037 TXNRD1Q16881 649 aa26.44■■□□□ 1.82
CDPF1-202ENST00000381037 RREB1Q92766 1687 aa26.43■■□□□ 1.82
CDPF1-202ENST00000381037 ASAP1Q9ULH1 1129 aa26.43■■□□□ 1.82
CDPF1-202ENST00000381037 TMPOP42166 694 aaKnown RBP26.42■■□□□ 1.82
CDPF1-202ENST00000381037 ATG3Q9NT62 314 aa26.42■■□□□ 1.82
CDPF1-202ENST00000381037 VIRMAQ69YN4 1812 aaKnown RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms