RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 GORABQ5T7V8 394 aa15.35■□□□□ 0.05
CDX2-201ENST00000381020 ADGRB3O60242 1522 aa15.34■□□□□ 0.05
CDX2-201ENST00000381020 TAF7LQ5H9L4 462 aa15.34■□□□□ 0.05
CDX2-201ENST00000381020 TOM1L2Q6ZVM7 507 aa15.34■□□□□ 0.05
CDX2-201ENST00000381020 CABLES1Q8TDN4 633 aa15.34■□□□□ 0.05
CDX2-201ENST00000381020 G3BP1Q13283 466 aaKnown RBP eCLIP15.34■□□□□ 0.05
CDX2-201ENST00000381020 HDAC1Q13547 482 aaPredicted RBP15.34■□□□□ 0.05
CDX2-201ENST00000381020 TSHZ3Q63HK5 1081 aa15.34■□□□□ 0.05
CDX2-201ENST00000381020 DIAPH3Q9NSV4 1193 aa15.34■□□□□ 0.05
CDX2-201ENST00000381020 PLEKHG3A1L390 1219 aa15.33■□□□□ 0.05
CDX2-201ENST00000381020 FLT4P35916 1363 aa15.33■□□□□ 0.05
CDX2-201ENST00000381020 LRRCC1Q9C099 1032 aa15.33■□□□□ 0.04
CDX2-201ENST00000381020 SIL1Q9H173 461 aa15.33■□□□□ 0.04
CDX2-201ENST00000381020 C16orf71Q8IYS4 520 aaPredicted RBP15.33■□□□□ 0.04
CDX2-201ENST00000381020 NPHP1O15259 732 aa15.33■□□□□ 0.04
CDX2-201ENST00000381020 HOXC9P31274 260 aa15.32■□□□□ 0.04
CDX2-201ENST00000381020 PLCB2Q00722 1185 aa15.32■□□□□ 0.04
CDX2-201ENST00000381020 G2E3Q7L622 706 aa15.32■□□□□ 0.04
CDX2-201ENST00000381020 LRRFIP2Q9Y608 721 aaKnown RBP15.32■□□□□ 0.04
CDX2-201ENST00000381020 A2ML1A8K2U0 1454 aa15.32■□□□□ 0.04
CDX2-201ENST00000381020 ARHGAP45Q92619 1136 aa15.32■□□□□ 0.04
CDX2-201ENST00000381020 ANKRD24Q8TF21 1146 aa15.32■□□□□ 0.04
CDX2-201ENST00000381020 NUTM1Q86Y26 1132 aa15.31■□□□□ 0.04
CDX2-201ENST00000381020 CLASRPQ8N2M8 674 aaKnown RBP15.31■□□□□ 0.04
CDX2-201ENST00000381020 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
CDX2-201ENST00000381020 GLI2P10070 1586 aa15.3■□□□□ 0.04
CDX2-201ENST00000381020 DIP2CQ9Y2E4 1556 aa15.3■□□□□ 0.04
CDX2-201ENST00000381020 ZBTB7BO15156 539 aaPredicted RBP15.3■□□□□ 0.04
CDX2-201ENST00000381020 NUCB1Q02818 461 aa15.3■□□□□ 0.04
CDX2-201ENST00000381020 LMTK2Q8IWU2 1503 aa15.3■□□□□ 0.04
CDX2-201ENST00000381020 GCP02774 474 aa15.3■□□□□ 0.04
CDX2-201ENST00000381020 PI4KAP2A4QPH2 592 aa15.29■□□□□ 0.04
CDX2-201ENST00000381020 NEK4P51957 841 aa15.29■□□□□ 0.04
CDX2-201ENST00000381020 CABP4P57796 275 aa15.29■□□□□ 0.04
CDX2-201ENST00000381020 PI4KAP1Q8N8J0 262 aa15.29■□□□□ 0.04
CDX2-201ENST00000381020 PTCD1O75127 700 aaKnown RBP15.29■□□□□ 0.04
CDX2-201ENST00000381020 DDX17Q92841 729 aaKnown RBP15.29■□□□□ 0.04
CDX2-201ENST00000381020 GOLGA6L3A6NEY3 463 aa15.28■□□□□ 0.04
CDX2-201ENST00000381020 SMC5Q8IY18 1101 aa15.28■□□□□ 0.04
CDX2-201ENST00000381020 DDX49Q9Y6V7 483 aaKnown RBP15.28■□□□□ 0.04
CDX2-201ENST00000381020 PTPRCP08575 1304 aa15.28■□□□□ 0.04
CDX2-201ENST00000381020 SLC39A6Q13433 755 aa15.28■□□□□ 0.04
CDX2-201ENST00000381020 L1TD1Q5T7N2 865 aaKnown RBP15.28■□□□□ 0.04
CDX2-201ENST00000381020 SIRT1Q96EB6 747 aa15.28■□□□□ 0.04
CDX2-201ENST00000381020 SPG7Q9UQ90 795 aa15.28■□□□□ 0.04
CDX2-201ENST00000381020 TBC1D9Q6ZT07 1266 aa15.28■□□□□ 0.04
CDX2-201ENST00000381020 TBC1D32Q96NH3 1257 aa15.28■□□□□ 0.04
CDX2-201ENST00000381020 CHL1O00533 1208 aa15.27■□□□□ 0.04
CDX2-201ENST00000381020 HSP90AB4PQ58FF6 505 aa15.27■□□□□ 0.04
CDX2-201ENST00000381020 NEUROD6Q96NK8 337 aa15.27■□□□□ 0.03
CDX2-201ENST00000381020 CHPF2Q9P2E5 772 aa15.26■□□□□ 0.03
CDX2-201ENST00000381020 AMOTQ4VCS5 1084 aa15.26■□□□□ 0.03
CDX2-201ENST00000381020 TULP4Q9NRJ4 1543 aa15.25■□□□□ 0.03
CDX2-201ENST00000381020 PIP4K2AP48426 406 aaPredicted RBP15.25■□□□□ 0.03
CDX2-201ENST00000381020 BMP2KLQ5H9B9 411 aa15.25■□□□□ 0.03
CDX2-201ENST00000381020 DNAAF4Q8WXU2 420 aa15.25■□□□□ 0.03
CDX2-201ENST00000381020 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
CDX2-201ENST00000381020 LGR6Q9HBX8 967 aa15.25■□□□□ 0.03
CDX2-201ENST00000381020 POLR1AO95602 1720 aaPredicted RBP15.25■□□□□ 0.03
CDX2-201ENST00000381020 ALKQ9UM73 1620 aa15.25■□□□□ 0.03
CDX2-201ENST00000381020 JARID2Q92833 1246 aaPredicted RBP15.25■□□□□ 0.03
CDX2-201ENST00000381020 PHAXQ9H814 394 aaKnown RBP15.25■□□□□ 0.03
CDX2-201ENST00000381020 DDX11L8A8MPP1 907 aa15.25■□□□□ 0.03
CDX2-201ENST00000381020 ERC2O15083 957 aa15.24■□□□□ 0.03
CDX2-201ENST00000381020 PTMAP06454 111 aaKnown RBP15.24■□□□□ 0.03
CDX2-201ENST00000381020 NBPF6Q5VWK0 638 aa15.24■□□□□ 0.03
CDX2-201ENST00000381020 NBPF4Q96M43 638 aa15.24■□□□□ 0.03
CDX2-201ENST00000381020 ANKRD44Q8N8A2 993 aa15.24■□□□□ 0.03
CDX2-201ENST00000381020 LAMC1P11047 1609 aa15.24■□□□□ 0.03
CDX2-201ENST00000381020 CAMSAP1Q5T5Y3 1602 aa15.23■□□□□ 0.03
CDX2-201ENST00000381020 GOLGA6L4A6NEF3 574 aa15.23■□□□□ 0.03
CDX2-201ENST00000381020 MX1P20591 662 aa15.23■□□□□ 0.03
CDX2-201ENST00000381020 OTUD7AQ8TE49 926 aaPredicted RBP15.23■□□□□ 0.03
CDX2-201ENST00000381020 IP6K1Q92551 441 aa15.23■□□□□ 0.03
CDX2-201ENST00000381020 SBNO1A3KN83 1393 aa15.23■□□□□ 0.03
CDX2-201ENST00000381020 FAM177BA6PVY3 158 aa15.23■□□□□ 0.03
CDX2-201ENST00000381020 RUFY2Q8WXA3 655 aa15.23■□□□□ 0.03
CDX2-201ENST00000381020 C19orf44Q9H6X5 657 aa15.23■□□□□ 0.03
CDX2-201ENST00000381020 DBF4Q9UBU7 674 aaPredicted RBP15.23■□□□□ 0.03
CDX2-201ENST00000381020 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
CDX2-201ENST00000381020 PLEKHG1Q9ULL1 1385 aa15.23■□□□□ 0.03
CDX2-201ENST00000381020 PPP1R42Q7Z4L9 355 aa15.22■□□□□ 0.03
CDX2-201ENST00000381020 QRICH2Q9H0J4 1663 aa15.22■□□□□ 0.03
CDX2-201ENST00000381020 HSP90B1P14625 803 aaKnown RBP15.22■□□□□ 0.03
CDX2-201ENST00000381020 FRMPD1Q5SYB0 1578 aa15.22■□□□□ 0.03
CDX2-201ENST00000381020 CEP85Q6P2H3 762 aa15.22■□□□□ 0.03
CDX2-201ENST00000381020 CCDC85AQ96PX6 553 aaPredicted RBP15.22■□□□□ 0.03
CDX2-201ENST00000381020 PHF23Q9BUL5 403 aaPredicted RBP15.22■□□□□ 0.03
CDX2-201ENST00000381020 RABEP1Q15276 862 aa15.22■□□□□ 0.03
CDX2-201ENST00000381020 MCTP1Q6DN14 999 aa15.22■□□□□ 0.03
CDX2-201ENST00000381020 CNTROBQ8N137 903 aa15.22■□□□□ 0.03
CDX2-201ENST00000381020 MAP3K2Q9Y2U5 619 aa15.22■□□□□ 0.03
CDX2-201ENST00000381020 NEXMIFQ5QGS0 1516 aa15.21■□□□□ 0.03
CDX2-201ENST00000381020 CWC27Q6UX04 472 aaKnown RBP15.21■□□□□ 0.03
CDX2-201ENST00000381020 CADPS2Q86UW7 1296 aa15.21■□□□□ 0.03
CDX2-201ENST00000381020 AACSQ86V21 672 aa15.21■□□□□ 0.03
CDX2-201ENST00000381020 UPF3BQ9BZI7 483 aaKnown RBP15.21■□□□□ 0.03
CDX2-201ENST00000381020 K7ELQ4 463 aaPredicted RBP15.21■□□□□ 0.02
CDX2-201ENST00000381020 FSD1Q9BTV5 496 aa15.21■□□□□ 0.02
CDX2-201ENST00000381020 VWDEQ8N2E2 1590 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms