RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 TOM1O60784 492 aa24.57■■□□□ 1.52
GMDS-201ENST00000380805 DCTN1Q14203 1278 aa24.57■■□□□ 1.52
GMDS-201ENST00000380805 TWISTNBQ3B726 338 aaPredicted RBP24.57■■□□□ 1.52
GMDS-201ENST00000380805 NUTM2GQ5VZR2 741 aa24.57■■□□□ 1.52
GMDS-201ENST00000380805 HTATSF1O43719 755 aaKnown RBP24.56■■□□□ 1.52
GMDS-201ENST00000380805 SKAP1Q86WV1 359 aa24.56■■□□□ 1.52
GMDS-201ENST00000380805 GAS2L2Q8NHY3 880 aa24.56■■□□□ 1.52
GMDS-201ENST00000380805 MTHFSDQ2M296 383 aaKnown RBP24.55■■□□□ 1.52
GMDS-201ENST00000380805 IP6K1Q92551 441 aa24.55■■□□□ 1.52
GMDS-201ENST00000380805 HAP1P54257 671 aaPredicted RBP24.54■■□□□ 1.52
GMDS-201ENST00000380805 PIP4K2BP78356 416 aa24.54■■□□□ 1.52
GMDS-201ENST00000380805 C8orf58Q8NAV2 365 aa24.54■■□□□ 1.52
GMDS-201ENST00000380805 USP19O94966 1318 aa24.54■■□□□ 1.52
GMDS-201ENST00000380805 CAMTA1Q9Y6Y1 1673 aa24.54■■□□□ 1.52
GMDS-201ENST00000380805 NCAPD2Q15021 1401 aa24.53■■□□□ 1.52
GMDS-201ENST00000380805 BRINP3Q76B58 766 aa24.52■■□□□ 1.52
GMDS-201ENST00000380805 TMEM57Q8N5G2 664 aa24.52■■□□□ 1.52
GMDS-201ENST00000380805 MSH5O43196 834 aa24.52■■□□□ 1.52
GMDS-201ENST00000380805 RWDD1Q9H446 243 aaPredicted RBP24.52■■□□□ 1.52
GMDS-201ENST00000380805 MCM10Q7L590 875 aa24.51■■□□□ 1.51
GMDS-201ENST00000380805 ZBTB40Q9NUA8 1239 aa24.51■■□□□ 1.51
GMDS-201ENST00000380805 ABCC4O15439 1325 aa24.5■■□□□ 1.51
GMDS-201ENST00000380805 HDAC1Q13547 482 aaPredicted RBP24.5■■□□□ 1.51
GMDS-201ENST00000380805 ITPRIPQ8IWB1 547 aa24.49■■□□□ 1.51
GMDS-201ENST00000380805 DDX17Q92841 729 aaKnown RBP24.49■■□□□ 1.51
GMDS-201ENST00000380805 RGPD2P0DJD1 1756 aa24.48■■□□□ 1.51
GMDS-201ENST00000380805 FOXO3O43524 673 aa24.48■■□□□ 1.51
GMDS-201ENST00000380805 RTF1Q92541 710 aaKnown RBP24.47■■□□□ 1.51
GMDS-201ENST00000380805 ROBO1Q9Y6N7 1651 aa24.47■■□□□ 1.51
GMDS-201ENST00000380805 FAM161AQ3B820 660 aa24.47■■□□□ 1.51
GMDS-201ENST00000380805 MED1Q15648 1581 aaPredicted RBP24.46■■□□□ 1.51
GMDS-201ENST00000380805 ANP32AP39687 249 aaKnown RBP24.46■■□□□ 1.51
GMDS-201ENST00000380805 ARHGEF25Q86VW2 580 aa24.46■■□□□ 1.51
GMDS-201ENST00000380805 CHMP4BQ9H444 224 aaKnown RBP24.46■■□□□ 1.51
GMDS-201ENST00000380805 LMO7Q8WWI1 1683 aa24.46■■□□□ 1.51
GMDS-201ENST00000380805 MAP3K5Q99683 1374 aa24.45■■□□□ 1.51
GMDS-201ENST00000380805 ELL2O00472 640 aaPredicted RBP24.44■■□□□ 1.5
GMDS-201ENST00000380805 GCP02774 474 aa24.44■■□□□ 1.5
GMDS-201ENST00000380805 C8orf34Q49A92 452 aa24.44■■□□□ 1.5
GMDS-201ENST00000380805 API5Q9BZZ5 524 aaKnown RBP24.44■■□□□ 1.5
GMDS-201ENST00000380805 GNAT3A8MTJ3 354 aa24.44■■□□□ 1.5
GMDS-201ENST00000380805 KRT28Q7Z3Y7 464 aa24.44■■□□□ 1.5
GMDS-201ENST00000380805 BABAM1Q9NWV8 329 aa24.44■■□□□ 1.5
GMDS-201ENST00000380805 RGS12O14924 1447 aa24.42■■□□□ 1.5
GMDS-201ENST00000380805 RGS3P49796 1198 aa24.42■■□□□ 1.5
GMDS-201ENST00000380805 XPCQ01831 940 aaPredicted RBP24.42■■□□□ 1.5
GMDS-201ENST00000380805 FAM208AQ9UK61 1670 aaKnown RBP24.41■■□□□ 1.5
GMDS-201ENST00000380805 CACNA1FO60840 1977 aa24.41■■□□□ 1.5
GMDS-201ENST00000380805 CRYBG1Q9Y4K1 1723 aa24.41■■□□□ 1.5
GMDS-201ENST00000380805 ZBTB7BO15156 539 aaPredicted RBP24.41■■□□□ 1.5
GMDS-201ENST00000380805 ABCC6O95255 1503 aa24.4■■□□□ 1.5
GMDS-201ENST00000380805 SOS1Q07889 1333 aaPredicted RBP24.4■■□□□ 1.5
GMDS-201ENST00000380805 SMC5Q8IY18 1101 aa24.4■■□□□ 1.5
GMDS-201ENST00000380805 CEMIPQ8WUJ3 1361 aa24.39■■□□□ 1.5
GMDS-201ENST00000380805 NBPF6Q5VWK0 638 aa24.39■■□□□ 1.5
GMDS-201ENST00000380805 LTV1Q96GA3 475 aaPredicted RBP24.39■■□□□ 1.5
GMDS-201ENST00000380805 NBPF4Q96M43 638 aa24.39■■□□□ 1.5
GMDS-201ENST00000380805 IPO9Q96P70 1041 aaKnown RBP24.39■■□□□ 1.5
GMDS-201ENST00000380805 PDZRN3Q9UPQ7 1066 aa24.39■■□□□ 1.5
GMDS-201ENST00000380805 TSPYL4Q9UJ04 414 aa24.38■■□□□ 1.49
GMDS-201ENST00000380805 PTPRCP08575 1304 aa24.38■■□□□ 1.49
GMDS-201ENST00000380805 KRT24Q2M2I5 525 aa24.38■■□□□ 1.49
GMDS-201ENST00000380805 KDM3BQ7LBC6 1761 aa24.37■■□□□ 1.49
GMDS-201ENST00000380805 RGPD5Q99666 1765 aa24.37■■□□□ 1.49
GMDS-201ENST00000380805 COL18A1P39060 1754 aa24.36■■□□□ 1.49
GMDS-201ENST00000380805 NHSL1Q5SYE7 1610 aa24.36■■□□□ 1.49
GMDS-201ENST00000380805 IL17REQ8NFR9 667 aa24.36■■□□□ 1.49
GMDS-201ENST00000380805 PXDNQ92626 1479 aa24.36■■□□□ 1.49
GMDS-201ENST00000380805 NPHP3Q7Z494 1330 aa24.36■■□□□ 1.49
GMDS-201ENST00000380805 INTS3Q68E01 1043 aaKnown RBP24.35■■□□□ 1.49
GMDS-201ENST00000380805 OVOS2A0A0G2JMS6 1433 aa24.35■■□□□ 1.49
GMDS-201ENST00000380805 N4BP2Q86UW6 1770 aaPredicted RBP24.35■■□□□ 1.49
GMDS-201ENST00000380805 ADAMTS7Q9UKP4 1686 aa24.34■■□□□ 1.49
GMDS-201ENST00000380805 USHBP1Q8N6Y0 703 aa24.33■■□□□ 1.49
GMDS-201ENST00000380805 TNS3Q68CZ2 1445 aa24.33■■□□□ 1.49
GMDS-201ENST00000380805 SOS2Q07890 1332 aaPredicted RBP24.32■■□□□ 1.48
GMDS-201ENST00000380805 AHDC1Q5TGY3 1603 aaPredicted RBP24.32■■□□□ 1.48
GMDS-201ENST00000380805 FBXO41Q8TF61 875 aa24.31■■□□□ 1.48
GMDS-201ENST00000380805 ANP32EQ9BTT0 268 aa24.31■■□□□ 1.48
GMDS-201ENST00000380805 PLEKHG2Q9H7P9 1386 aa24.3■■□□□ 1.48
GMDS-201ENST00000380805 TAF7Q15545 349 aaPredicted RBP24.3■■□□□ 1.48
GMDS-201ENST00000380805 MIS18AQ9NYP9 233 aa24.3■■□□□ 1.48
GMDS-201ENST00000380805 AMOTQ4VCS5 1084 aa24.3■■□□□ 1.48
GMDS-201ENST00000380805 ANKRD24Q8TF21 1146 aa24.3■■□□□ 1.48
GMDS-201ENST00000380805 PHLPP1O60346 1717 aa24.29■■□□□ 1.48
GMDS-201ENST00000380805 HSPA1LP34931 641 aa24.29■■□□□ 1.48
GMDS-201ENST00000380805 NOP58Q9Y2X3 529 aaKnown RBP24.29■■□□□ 1.48
GMDS-201ENST00000380805 SIPA1L3O60292 1781 aaPredicted RBP24.28■■□□□ 1.48
GMDS-201ENST00000380805 LRRC59Q96AG4 307 aaKnown RBP24.28■■□□□ 1.48
GMDS-201ENST00000380805 ERBB3P21860 1342 aa24.27■■□□□ 1.48
GMDS-201ENST00000380805 AKAP4Q5JQC9 854 aa24.27■■□□□ 1.48
GMDS-201ENST00000380805 PLEKHO1Q53GL0 409 aaPredicted RBP24.27■■□□□ 1.48
GMDS-201ENST00000380805 LMOD2Q6P5Q4 547 aa24.27■■□□□ 1.48
GMDS-201ENST00000380805 AXIN2Q9Y2T1 843 aa24.27■■□□□ 1.48
GMDS-201ENST00000380805 COL16A1Q07092 1604 aaPredicted RBP24.26■■□□□ 1.47
GMDS-201ENST00000380805 NUCB1Q02818 461 aa24.26■■□□□ 1.47
GMDS-201ENST00000380805 GCC1Q96CN9 775 aa24.26■■□□□ 1.47
GMDS-201ENST00000380805 SLC4A2P04920 1241 aa24.25■■□□□ 1.47
GMDS-201ENST00000380805 SPATA31A3Q5VYP0 1347 aa24.25■■□□□ 1.47
GMDS-201ENST00000380805 ATP10DQ9P241 1426 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms