RNA–Protein interactions for RNA: ENST00000380765.2

SPDYE3-202, Transcript of speedy/RINGO cell cycle regulator family member E3, humanhuman

TSL 1 (best)

Gene SPDYE3, Length 1,903 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3-202ENST00000380765 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.84
SPDYE3-202ENST00000380765 BARGINQ6ZT62 677 aa20.27■□□□□ 0.84
SPDYE3-202ENST00000380765 DISP2A7MBM2 1401 aa20.27■□□□□ 0.84
SPDYE3-202ENST00000380765 RUNDC1Q96C34 613 aa20.26■□□□□ 0.83
SPDYE3-202ENST00000380765 PNNQ9H307 717 aaKnown RBP20.26■□□□□ 0.83
SPDYE3-202ENST00000380765 OVOS2A0A0G2JMS6 1433 aa20.26■□□□□ 0.83
SPDYE3-202ENST00000380765 POTEAQ6S8J7 498 aa20.25■□□□□ 0.83
SPDYE3-202ENST00000380765 MAPK8IP3Q9UPT6 1336 aa20.25■□□□□ 0.83
SPDYE3-202ENST00000380765 A0A0G2JS52 829 aa20.23■□□□□ 0.83
SPDYE3-202ENST00000380765 NEFMP07197 916 aa20.23■□□□□ 0.83
SPDYE3-202ENST00000380765 MTHFSDQ2M296 383 aaKnown RBP20.23■□□□□ 0.83
SPDYE3-202ENST00000380765 RBM6P78332 1123 aaKnown RBP20.23■□□□□ 0.83
SPDYE3-202ENST00000380765 WNK3Q9BYP7 1800 aa20.22■□□□□ 0.83
SPDYE3-202ENST00000380765 APAF1O14727 1248 aa20.22■□□□□ 0.83
SPDYE3-202ENST00000380765 CDCA7Q9BWT1 371 aaPredicted RBP20.22■□□□□ 0.83
SPDYE3-202ENST00000380765 PARP4Q9UKK3 1724 aaKnown RBP20.22■□□□□ 0.83
SPDYE3-202ENST00000380765 EP400Q96L91 3159 aa20.22■□□□□ 0.83
SPDYE3-202ENST00000380765 PLEKHO1Q53GL0 409 aaPredicted RBP20.21■□□□□ 0.83
SPDYE3-202ENST00000380765 RRP7AQ9Y3A4 280 aaKnown RBP20.21■□□□□ 0.83
SPDYE3-202ENST00000380765 ONECUT3O60422 494 aaPredicted RBP20.21■□□□□ 0.83
SPDYE3-202ENST00000380765 RXRBP28702 533 aa20.21■□□□□ 0.83
SPDYE3-202ENST00000380765 AMOTQ4VCS5 1084 aa20.21■□□□□ 0.83
SPDYE3-202ENST00000380765 ZCRB1Q8TBF4 217 aaKnown RBP20.21■□□□□ 0.83
SPDYE3-202ENST00000380765 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.2■□□□□ 0.82
SPDYE3-202ENST00000380765 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
SPDYE3-202ENST00000380765 NEUROD2Q15784 382 aa20.19■□□□□ 0.82
SPDYE3-202ENST00000380765 DDB1Q16531 1140 aa20.19■□□□□ 0.82
SPDYE3-202ENST00000380765 PLEKHG2Q9H7P9 1386 aa20.19■□□□□ 0.82
SPDYE3-202ENST00000380765 THSD7AQ9UPZ6 1657 aa20.19■□□□□ 0.82
SPDYE3-202ENST00000380765 EXOC5O00471 708 aa20.19■□□□□ 0.82
SPDYE3-202ENST00000380765 ZNF530Q6P9A1 599 aaPredicted RBP20.19■□□□□ 0.82
SPDYE3-202ENST00000380765 PKD1L3Q7Z443 1732 aa20.18■□□□□ 0.82
SPDYE3-202ENST00000380765 CYP27B1O15528 508 aa20.18■□□□□ 0.82
SPDYE3-202ENST00000380765 TMPOP42166 694 aaKnown RBP20.18■□□□□ 0.82
SPDYE3-202ENST00000380765 SEPT12Q8IYM1 358 aa20.18■□□□□ 0.82
SPDYE3-202ENST00000380765 GAS2L2Q8NHY3 880 aa20.18■□□□□ 0.82
SPDYE3-202ENST00000380765 DDX54Q8TDD1 881 aaKnown RBP20.18■□□□□ 0.82
SPDYE3-202ENST00000380765 LRRC37A3O60309 1634 aa20.18■□□□□ 0.82
SPDYE3-202ENST00000380765 TNS2Q63HR2 1409 aa20.18■□□□□ 0.82
SPDYE3-202ENST00000380765 NFE2L2Q16236 605 aa20.17■□□□□ 0.82
SPDYE3-202ENST00000380765 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
SPDYE3-202ENST00000380765 PCDH11XQ9BZA7 1347 aa20.17■□□□□ 0.82
SPDYE3-202ENST00000380765 PCDH11YQ9BZA8 1340 aa20.17■□□□□ 0.82
SPDYE3-202ENST00000380765 RIPK4P57078 832 aa20.15■□□□□ 0.82
SPDYE3-202ENST00000380765 SHANK3Q9BYB0 1731 aa20.15■□□□□ 0.82
SPDYE3-202ENST00000380765 PHKG2P15735 406 aa20.15■□□□□ 0.82
SPDYE3-202ENST00000380765 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.81
SPDYE3-202ENST00000380765 C1orf141Q5JVX7 400 aa20.14■□□□□ 0.81
SPDYE3-202ENST00000380765 AKAP4Q5JQC9 854 aa20.14■□□□□ 0.81
SPDYE3-202ENST00000380765 IFNL2Q8IZJ0 200 aa20.14■□□□□ 0.81
SPDYE3-202ENST00000380765 RGS12O14924 1447 aa20.13■□□□□ 0.81
SPDYE3-202ENST00000380765 PRKCSHP14314 528 aaPredicted RBP20.13■□□□□ 0.81
SPDYE3-202ENST00000380765 MARCH10Q8NA82 808 aaPredicted RBP20.13■□□□□ 0.81
SPDYE3-202ENST00000380765 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
SPDYE3-202ENST00000380765 MAP3K5Q99683 1374 aa20.13■□□□□ 0.81
SPDYE3-202ENST00000380765 GNAT3A8MTJ3 354 aa20.12■□□□□ 0.81
SPDYE3-202ENST00000380765 PDE3BQ13370 1112 aa20.12■□□□□ 0.81
SPDYE3-202ENST00000380765 MPRIPQ6WCQ1 1025 aa20.12■□□□□ 0.81
SPDYE3-202ENST00000380765 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
SPDYE3-202ENST00000380765 DCTN1Q14203 1278 aa20.11■□□□□ 0.81
SPDYE3-202ENST00000380765 FAM182BQ5T319 152 aa20.11■□□□□ 0.81
SPDYE3-202ENST00000380765 MCM10Q7L590 875 aa20.1■□□□□ 0.81
SPDYE3-202ENST00000380765 DLG5Q8TDM6 1919 aa20.09■□□□□ 0.81
SPDYE3-202ENST00000380765 RTF1Q92541 710 aaKnown RBP20.09■□□□□ 0.81
SPDYE3-202ENST00000380765 THUMPD2Q9BTF0 503 aaKnown RBP20.09■□□□□ 0.81
SPDYE3-202ENST00000380765 LGR6Q9HBX8 967 aa20.09■□□□□ 0.81
SPDYE3-202ENST00000380765 KDM6AO15550 1401 aaPredicted RBP20.08■□□□□ 0.81
SPDYE3-202ENST00000380765 IL17REQ8NFR9 667 aa20.08■□□□□ 0.81
SPDYE3-202ENST00000380765 NKX1-1Q15270 411 aaPredicted RBP20.08■□□□□ 0.8
SPDYE3-202ENST00000380765 KRT27Q7Z3Y8 459 aa20.08■□□□□ 0.8
SPDYE3-202ENST00000380765 WWC1Q8IX03 1113 aa20.07■□□□□ 0.8
SPDYE3-202ENST00000380765 DCAF5Q96JK2 942 aa20.07■□□□□ 0.8
SPDYE3-202ENST00000380765 BRWD3Q6RI45 1802 aa20.07■□□□□ 0.8
SPDYE3-202ENST00000380765 HSP90AB1P08238 724 aaKnown RBP20.06■□□□□ 0.8
SPDYE3-202ENST00000380765 LMOD3Q0VAK6 560 aa20.06■□□□□ 0.8
SPDYE3-202ENST00000380765 ANP32EQ9BTT0 268 aa20.06■□□□□ 0.8
SPDYE3-202ENST00000380765 RNMTO43148 476 aaKnown RBP20.06■□□□□ 0.8
SPDYE3-202ENST00000380765 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
SPDYE3-202ENST00000380765 CCDC27Q2M243 656 aa20.06■□□□□ 0.8
SPDYE3-202ENST00000380765 CEMIPQ8WUJ3 1361 aa20.05■□□□□ 0.8
SPDYE3-202ENST00000380765 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
SPDYE3-202ENST00000380765 NGEFQ8N5V2 710 aa20.04■□□□□ 0.8
SPDYE3-202ENST00000380765 ZNF521Q96K83 1311 aa20.03■□□□□ 0.8
SPDYE3-202ENST00000380765 ADAMTS7Q9UKP4 1686 aa20.02■□□□□ 0.8
SPDYE3-202ENST00000380765 ACSBG1Q96GR2 724 aa20.02■□□□□ 0.79
SPDYE3-202ENST00000380765 TOGARAM1Q9Y4F4 1720 aa20.01■□□□□ 0.79
SPDYE3-202ENST00000380765 ZBED9Q6R2W3 1325 aa20.01■□□□□ 0.79
SPDYE3-202ENST00000380765 TEFQ10587 303 aa20■□□□□ 0.79
SPDYE3-202ENST00000380765 NFATC2IPQ8NCF5 419 aa20■□□□□ 0.79
SPDYE3-202ENST00000380765 SYTL4Q96C24 671 aaPredicted RBP20■□□□□ 0.79
SPDYE3-202ENST00000380765 SCN11AQ9UI33 1791 aa20■□□□□ 0.79
SPDYE3-202ENST00000380765 SLC52A2Q9HAB3 445 aa20■□□□□ 0.79
SPDYE3-202ENST00000380765 ERVV-2B6SEH9 535 aa19.99■□□□□ 0.79
SPDYE3-202ENST00000380765 PRIM1P49642 420 aaKnown RBP19.99■□□□□ 0.79
SPDYE3-202ENST00000380765 DOT1LQ8TEK3 1739 aa19.98■□□□□ 0.79
SPDYE3-202ENST00000380765 BCL9O00512 1426 aa19.98■□□□□ 0.79
SPDYE3-202ENST00000380765 KCNQ2O43526 872 aa19.98■□□□□ 0.79
SPDYE3-202ENST00000380765 CABP4P57796 275 aa19.98■□□□□ 0.79
SPDYE3-202ENST00000380765 SPINK5Q9NQ38 1064 aaPredicted RBP19.98■□□□□ 0.79
SPDYE3-202ENST00000380765 VIRMAQ69YN4 1812 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms