RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 EYA1Q99502 592 aa15.93■□□□□ 0.14
VPS16-202ENST00000380445 RTN4Q9NQC3 1192 aaKnown RBP15.93■□□□□ 0.14
VPS16-202ENST00000380445 ADGRL3Q9HAR2 1447 aa15.92■□□□□ 0.14
VPS16-202ENST00000380445 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
VPS16-202ENST00000380445 HOXC9P31274 260 aa15.92■□□□□ 0.14
VPS16-202ENST00000380445 UPF2Q9HAU5 1272 aaKnown RBP15.92■□□□□ 0.14
VPS16-202ENST00000380445 RTL1A6NKG5 1358 aa15.91■□□□□ 0.14
VPS16-202ENST00000380445 NPHP4O75161 1426 aaPredicted RBP15.91■□□□□ 0.14
VPS16-202ENST00000380445 MTHFSDQ2M296 383 aaKnown RBP15.91■□□□□ 0.14
VPS16-202ENST00000380445 CRB1P82279 1406 aa15.9■□□□□ 0.14
VPS16-202ENST00000380445 RTL5Q5HYW3 569 aaPredicted RBP15.9■□□□□ 0.14
VPS16-202ENST00000380445 NUTM2GQ5VZR2 741 aa15.89■□□□□ 0.13
VPS16-202ENST00000380445 C14orf37Q86TY3 774 aa15.89■□□□□ 0.13
VPS16-202ENST00000380445 GCC1Q96CN9 775 aa15.89■□□□□ 0.13
VPS16-202ENST00000380445 MARF1Q9Y4F3 1742 aaKnown RBP15.89■□□□□ 0.13
VPS16-202ENST00000380445 PSME1Q06323 249 aa15.88■□□□□ 0.13
VPS16-202ENST00000380445 PTPRCP08575 1304 aa15.88■□□□□ 0.13
VPS16-202ENST00000380445 ESCO1Q5FWF5 840 aa15.88■□□□□ 0.13
VPS16-202ENST00000380445 NUCB1Q02818 461 aa15.87■□□□□ 0.13
VPS16-202ENST00000380445 KCNH5Q8NCM2 988 aa15.87■□□□□ 0.13
VPS16-202ENST00000380445 TSPYL4Q9UJ04 414 aa15.87■□□□□ 0.13
VPS16-202ENST00000380445 GNAT3A8MTJ3 354 aa15.86■□□□□ 0.13
VPS16-202ENST00000380445 INTS3Q68E01 1043 aaKnown RBP15.86■□□□□ 0.13
VPS16-202ENST00000380445 PKNOX2Q96KN3 472 aa15.86■□□□□ 0.13
VPS16-202ENST00000380445 FOXO3O43524 673 aa15.85■□□□□ 0.13
VPS16-202ENST00000380445 IP6K1Q92551 441 aa15.85■□□□□ 0.13
VPS16-202ENST00000380445 CHD1LQ86WJ1 897 aa15.85■□□□□ 0.13
VPS16-202ENST00000380445 USP19O94966 1318 aa15.85■□□□□ 0.13
VPS16-202ENST00000380445 BABAM1Q9NWV8 329 aa15.84■□□□□ 0.13
VPS16-202ENST00000380445 SEC24BO95487 1268 aa15.84■□□□□ 0.13
VPS16-202ENST00000380445 USP35Q9P2H5 1018 aa15.84■□□□□ 0.13
VPS16-202ENST00000380445 KRT24Q2M2I5 525 aa15.83■□□□□ 0.13
VPS16-202ENST00000380445 RBM33Q96EV2 1170 aaKnown RBP15.83■□□□□ 0.13
VPS16-202ENST00000380445 SOS1Q07889 1333 aaPredicted RBP15.83■□□□□ 0.13
VPS16-202ENST00000380445 NWD1Q149M9 1564 aa15.83■□□□□ 0.12
VPS16-202ENST00000380445 BECN1Q14457 450 aa15.82■□□□□ 0.12
VPS16-202ENST00000380445 LTV1Q96GA3 475 aaPredicted RBP15.82■□□□□ 0.12
VPS16-202ENST00000380445 MAP3K5Q99683 1374 aa15.82■□□□□ 0.12
VPS16-202ENST00000380445 LTN1O94822 1766 aa15.82■□□□□ 0.12
VPS16-202ENST00000380445 SLC4A2P04920 1241 aa15.81■□□□□ 0.12
VPS16-202ENST00000380445 NFAT5O94916 1531 aa15.81■□□□□ 0.12
VPS16-202ENST00000380445 ANKRD45Q5TZF3 282 aa15.81■□□□□ 0.12
VPS16-202ENST00000380445 LNPKQ9C0E8 428 aa15.81■□□□□ 0.12
VPS16-202ENST00000380445 C1orf115Q9H7X2 142 aa15.81■□□□□ 0.12
VPS16-202ENST00000380445 TBC1D32Q96NH3 1257 aa15.81■□□□□ 0.12
VPS16-202ENST00000380445 MIS18AQ9NYP9 233 aa15.81■□□□□ 0.12
VPS16-202ENST00000380445 STK31Q9BXU1 1019 aa15.8■□□□□ 0.12
VPS16-202ENST00000380445 LRRC37A3O60309 1634 aa15.8■□□□□ 0.12
VPS16-202ENST00000380445 RPAP2Q8IXW5 612 aaPredicted RBP15.8■□□□□ 0.12
VPS16-202ENST00000380445 RGS12O14924 1447 aa15.79■□□□□ 0.12
VPS16-202ENST00000380445 SLC4A3P48751 1232 aa15.79■□□□□ 0.12
VPS16-202ENST00000380445 PROSER2Q86WR7 435 aaPredicted RBP15.79■□□□□ 0.12
VPS16-202ENST00000380445 PHRF1Q9P1Y6 1649 aaKnown RBP15.79■□□□□ 0.12
VPS16-202ENST00000380445 TAF7Q15545 349 aaPredicted RBP15.79■□□□□ 0.12
VPS16-202ENST00000380445 SIRT2Q8IXJ6 389 aa15.79■□□□□ 0.12
VPS16-202ENST00000380445 CCDC30Q5VVM6 783 aa15.78■□□□□ 0.12
VPS16-202ENST00000380445 BMP2KLQ5H9B9 411 aa15.78■□□□□ 0.12
VPS16-202ENST00000380445 CCT4P50991 539 aaKnown RBP15.77■□□□□ 0.11
VPS16-202ENST00000380445 ORAI2Q96SN7 254 aa15.77■□□□□ 0.11
VPS16-202ENST00000380445 C19orf44Q9H6X5 657 aa15.77■□□□□ 0.11
VPS16-202ENST00000380445 ANKRD44Q8N8A2 993 aa15.76■□□□□ 0.11
VPS16-202ENST00000380445 IL17REQ8NFR9 667 aa15.76■□□□□ 0.11
VPS16-202ENST00000380445 CHMP4AQ9BY43 222 aa15.76■□□□□ 0.11
VPS16-202ENST00000380445 GCP02774 474 aa15.76■□□□□ 0.11
VPS16-202ENST00000380445 DCTPP1Q9H773 170 aa15.76■□□□□ 0.11
VPS16-202ENST00000380445 MSH6P52701 1360 aa15.76■□□□□ 0.11
VPS16-202ENST00000380445 NBPF6Q5VWK0 638 aa15.75■□□□□ 0.11
VPS16-202ENST00000380445 NBPF4Q96M43 638 aa15.75■□□□□ 0.11
VPS16-202ENST00000380445 KIF1AQ12756 1690 aa15.75■□□□□ 0.11
VPS16-202ENST00000380445 SLIT3O75094 1523 aa15.75■□□□□ 0.11
VPS16-202ENST00000380445 ARHGEF25Q86VW2 580 aa15.75■□□□□ 0.11
VPS16-202ENST00000380445 USHBP1Q8N6Y0 703 aa15.75■□□□□ 0.11
VPS16-202ENST00000380445 C22orf23Q9BZE7 217 aa15.75■□□□□ 0.11
VPS16-202ENST00000380445 AEBP2Q6ZN18 517 aaPredicted RBP15.74■□□□□ 0.11
VPS16-202ENST00000380445 KRT28Q7Z3Y7 464 aa15.74■□□□□ 0.11
VPS16-202ENST00000380445 ZBTB7CA1YPR0 619 aa15.73■□□□□ 0.11
VPS16-202ENST00000380445 MFAP1P55081 439 aaKnown RBP15.73■□□□□ 0.11
VPS16-202ENST00000380445 AMOTQ4VCS5 1084 aa15.73■□□□□ 0.11
VPS16-202ENST00000380445 PLEKHO1Q53GL0 409 aaPredicted RBP15.73■□□□□ 0.11
VPS16-202ENST00000380445 CEMIPQ8WUJ3 1361 aa15.73■□□□□ 0.11
VPS16-202ENST00000380445 C1orf167Q5SNV9 1468 aa15.73■□□□□ 0.11
VPS16-202ENST00000380445 HMMRO75330 724 aa15.73■□□□□ 0.11
VPS16-202ENST00000380445 CEP85Q6P2H3 762 aa15.73■□□□□ 0.11
VPS16-202ENST00000380445 CACNA1FO60840 1977 aa15.73■□□□□ 0.11
VPS16-202ENST00000380445 LMOD2Q6P5Q4 547 aa15.72■□□□□ 0.11
VPS16-202ENST00000380445 ATP10DQ9P241 1426 aa15.72■□□□□ 0.11
VPS16-202ENST00000380445 FLIIQ13045 1269 aa15.71■□□□□ 0.11
VPS16-202ENST00000380445 AKAP4Q5JQC9 854 aa15.71■□□□□ 0.11
VPS16-202ENST00000380445 SLC4A10Q6U841 1118 aa15.71■□□□□ 0.11
VPS16-202ENST00000380445 G2E3Q7L622 706 aa15.71■□□□□ 0.11
VPS16-202ENST00000380445 MEIS3Q99687 375 aa15.71■□□□□ 0.11
VPS16-202ENST00000380445 LMTK3Q96Q04 1460 aa15.71■□□□□ 0.11
VPS16-202ENST00000380445 MST1RQ04912 1400 aa15.71■□□□□ 0.11
VPS16-202ENST00000380445 NCOA3Q9Y6Q9 1424 aa15.71■□□□□ 0.11
VPS16-202ENST00000380445 ATF3P18847 181 aa15.7■□□□□ 0.1
VPS16-202ENST00000380445 XPCQ01831 940 aaPredicted RBP15.7■□□□□ 0.1
VPS16-202ENST00000380445 FKBP5Q13451 457 aaPredicted RBP15.7■□□□□ 0.1
VPS16-202ENST00000380445 HOXB7P09629 217 aa15.7■□□□□ 0.1
VPS16-202ENST00000380445 TRPM3Q9HCF6 1732 aaPredicted RBP15.7■□□□□ 0.1
VPS16-202ENST00000380445 FAM208AQ9UK61 1670 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms