RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 POLR3AO14802 1390 aaPredicted RBP12.4□□□□□ -0.42
PMS2-202ENST00000380416 COL5A2P05997 1499 aaPredicted RBP12.4□□□□□ -0.43
PMS2-202ENST00000380416 EVC2Q86UK5 1308 aa12.39□□□□□ -0.43
PMS2-202ENST00000380416 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
PMS2-202ENST00000380416 ACEP12821 1306 aa12.38□□□□□ -0.43
PMS2-202ENST00000380416 PLEKHG3A1L390 1219 aa12.38□□□□□ -0.43
PMS2-202ENST00000380416 KIF3CO14782 793 aa12.38□□□□□ -0.43
PMS2-202ENST00000380416 ZC3H6P61129 1189 aaKnown RBP12.38□□□□□ -0.43
PMS2-202ENST00000380416 CARD11Q9BXL7 1154 aa12.38□□□□□ -0.43
PMS2-202ENST00000380416 CPDO75976 1380 aa12.38□□□□□ -0.43
PMS2-202ENST00000380416 PCNTO95613 3336 aa12.37□□□□□ -0.43
PMS2-202ENST00000380416 CRB1P82279 1406 aa12.37□□□□□ -0.43
PMS2-202ENST00000380416 JMYQ8N9B5 988 aa12.37□□□□□ -0.43
PMS2-202ENST00000380416 NHSQ6T4R5 1651 aa12.37□□□□□ -0.43
PMS2-202ENST00000380416 ZNF526Q8TF50 670 aaPredicted RBP12.36□□□□□ -0.43
PMS2-202ENST00000380416 DDB1Q16531 1140 aa12.35□□□□□ -0.43
PMS2-202ENST00000380416 TUBGCP6Q96RT7 1819 aa12.34□□□□□ -0.43
PMS2-202ENST00000380416 BRD4O60885 1362 aaPredicted RBP12.34□□□□□ -0.43
PMS2-202ENST00000380416 SBNO2Q9Y2G9 1366 aa12.34□□□□□ -0.43
PMS2-202ENST00000380416 POLD1P28340 1107 aa12.34□□□□□ -0.43
PMS2-202ENST00000380416 ZNF827Q17R98 1081 aa12.34□□□□□ -0.43
PMS2-202ENST00000380416 MARCH10Q8NA82 808 aaPredicted RBP12.34□□□□□ -0.43
PMS2-202ENST00000380416 NUTM2GQ5VZR2 741 aa12.33□□□□□ -0.44
PMS2-202ENST00000380416 SLC16A10Q8TF71 515 aa12.33□□□□□ -0.44
PMS2-202ENST00000380416 KLRG1Q96E93 195 aa12.33□□□□□ -0.44
PMS2-202ENST00000380416 PCGF6Q9BYE7 350 aa12.33□□□□□ -0.44
PMS2-202ENST00000380416 CABP1Q9NZU7 370 aa12.33□□□□□ -0.44
PMS2-202ENST00000380416 USP6P35125 1406 aa12.33□□□□□ -0.44
PMS2-202ENST00000380416 ABTB2Q8N961 1025 aa12.32□□□□□ -0.44
PMS2-202ENST00000380416 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
PMS2-202ENST00000380416 CLSPNQ9HAW4 1339 aa12.31□□□□□ -0.44
PMS2-202ENST00000380416 BTAF1O14981 1849 aa12.3□□□□□ -0.44
PMS2-202ENST00000380416 USP19O94966 1318 aa12.3□□□□□ -0.44
PMS2-202ENST00000380416 PIK3C2AO00443 1686 aa12.29□□□□□ -0.44
PMS2-202ENST00000380416 MON2Q7Z3U7 1717 aa12.29□□□□□ -0.44
PMS2-202ENST00000380416 TOMM70O94826 608 aa12.29□□□□□ -0.44
PMS2-202ENST00000380416 NLRP13Q86W25 1043 aa12.29□□□□□ -0.44
PMS2-202ENST00000380416 WWC3Q9ULE0 1092 aa12.29□□□□□ -0.44
PMS2-202ENST00000380416 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
PMS2-202ENST00000380416 PNPLA7Q6ZV29 1317 aa12.27□□□□□ -0.45
PMS2-202ENST00000380416 KTN1Q86UP2 1357 aaKnown RBP12.27□□□□□ -0.45
PMS2-202ENST00000380416 CICQ96RK0 1608 aaPredicted RBP12.26□□□□□ -0.45
PMS2-202ENST00000380416 COL18A1P39060 1754 aa12.26□□□□□ -0.45
PMS2-202ENST00000380416 NLRP6P59044 892 aa12.26□□□□□ -0.45
PMS2-202ENST00000380416 TMC1Q8TDI8 760 aa12.26□□□□□ -0.45
PMS2-202ENST00000380416 CDCA7Q9BWT1 371 aaPredicted RBP12.26□□□□□ -0.45
PMS2-202ENST00000380416 TIMELESSQ9UNS1 1208 aa12.26□□□□□ -0.45
PMS2-202ENST00000380416 USP47Q96K76 1375 aa12.26□□□□□ -0.45
PMS2-202ENST00000380416 CPSF1Q10570 1443 aaKnown RBP12.26□□□□□ -0.45
PMS2-202ENST00000380416 SLIT3O75094 1523 aa12.26□□□□□ -0.45
PMS2-202ENST00000380416 ST20-MTHFSA0A0A6YYL1 179 aa12.25□□□□□ -0.45
PMS2-202ENST00000380416 GCP02774 474 aa12.25□□□□□ -0.45
PMS2-202ENST00000380416 LRRC4BQ9NT99 713 aa12.25□□□□□ -0.45
PMS2-202ENST00000380416 TTC21BQ7Z4L5 1316 aa12.25□□□□□ -0.45
PMS2-202ENST00000380416 TTC21AQ8NDW8 1320 aa12.25□□□□□ -0.45
PMS2-202ENST00000380416 HTRA3P83110 453 aa12.24□□□□□ -0.45
PMS2-202ENST00000380416 TNS2Q63HR2 1409 aa12.24□□□□□ -0.45
PMS2-202ENST00000380416 HDGFL2Q7Z4V5 671 aaPredicted RBP12.24□□□□□ -0.45
PMS2-202ENST00000380416 CCER1Q8TC90 406 aaPredicted RBP12.24□□□□□ -0.45
PMS2-202ENST00000380416 ABCC6O95255 1503 aa12.23□□□□□ -0.45
PMS2-202ENST00000380416 ZBTB7CA1YPR0 619 aa12.23□□□□□ -0.45
PMS2-202ENST00000380416 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
PMS2-202ENST00000380416 CREBZFQ9NS37 354 aa12.23□□□□□ -0.45
PMS2-202ENST00000380416 USP54Q70EL1 1684 aa12.22□□□□□ -0.45
PMS2-202ENST00000380416 CD163L1Q9NR16 1453 aa12.22□□□□□ -0.45
PMS2-202ENST00000380416 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
PMS2-202ENST00000380416 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
PMS2-202ENST00000380416 TOM1L2Q6ZVM7 507 aa12.22□□□□□ -0.45
PMS2-202ENST00000380416 TESK2Q96S53 571 aa12.22□□□□□ -0.45
PMS2-202ENST00000380416 TERF2IPQ9NYB0 399 aa12.22□□□□□ -0.45
PMS2-202ENST00000380416 EDC4Q6P2E9 1401 aaKnown RBP12.21□□□□□ -0.45
PMS2-202ENST00000380416 WDR17Q8IZU2 1322 aa12.21□□□□□ -0.45
PMS2-202ENST00000380416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.21□□□□□ -0.45
PMS2-202ENST00000380416 KCNH5Q8NCM2 988 aa12.21□□□□□ -0.45
PMS2-202ENST00000380416 A0A1W2PP64 1363 aa12.2□□□□□ -0.46
PMS2-202ENST00000380416 TMF1P82094 1093 aa12.2□□□□□ -0.46
PMS2-202ENST00000380416 RBM46Q8TBY0 533 aaKnown RBP12.2□□□□□ -0.46
PMS2-202ENST00000380416 SLC12A5Q9H2X9 1139 aa12.2□□□□□ -0.46
PMS2-202ENST00000380416 CD2APQ9Y5K6 639 aa12.2□□□□□ -0.46
PMS2-202ENST00000380416 SOX12O15370 315 aa12.19□□□□□ -0.46
PMS2-202ENST00000380416 PRR29P0C7W0 189 aa12.19□□□□□ -0.46
PMS2-202ENST00000380416 HSPA1AP0DMV8 641 aaKnown RBP12.19□□□□□ -0.46
PMS2-202ENST00000380416 HSPA1BP0DMV9 641 aaKnown RBP12.19□□□□□ -0.46
PMS2-202ENST00000380416 NUBP1P53384 320 aa12.19□□□□□ -0.46
PMS2-202ENST00000380416 NFAT5O94916 1531 aa12.19□□□□□ -0.46
PMS2-202ENST00000380416 RGPD5Q99666 1765 aa12.19□□□□□ -0.46
PMS2-202ENST00000380416 LTN1O94822 1766 aa12.18□□□□□ -0.46
PMS2-202ENST00000380416 LY75O60449 1722 aa12.18□□□□□ -0.46
PMS2-202ENST00000380416 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
PMS2-202ENST00000380416 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
PMS2-202ENST00000380416 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
PMS2-202ENST00000380416 EXOC5O00471 708 aa12.17□□□□□ -0.46
PMS2-202ENST00000380416 POTEIP0CG38 1075 aa12.17□□□□□ -0.46
PMS2-202ENST00000380416 SLC27A3Q5K4L6 730 aa12.17□□□□□ -0.46
PMS2-202ENST00000380416 NME9Q86XW9 330 aa12.17□□□□□ -0.46
PMS2-202ENST00000380416 TFCP2L1Q9NZI6 479 aa12.17□□□□□ -0.46
PMS2-202ENST00000380416 FSTL1Q12841 308 aa12.16□□□□□ -0.46
PMS2-202ENST00000380416 NMRK2Q9NPI5 230 aa12.16□□□□□ -0.46
PMS2-202ENST00000380416 ANKRD36BQ8N2N9 1353 aa12.16□□□□□ -0.46
PMS2-202ENST00000380416 RGL2O15211 777 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms