RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 AKT1S1Q96B36 256 aa32.33■■■□□ 2.77
U2AF1-202ENST00000380276 RTL1A6NKG5 1358 aa32.32■■■□□ 2.77
U2AF1-202ENST00000380276 USHBP1Q8N6Y0 703 aa32.32■■■□□ 2.76
U2AF1-202ENST00000380276 SMG6Q86US8 1419 aaKnown RBP32.32■■■□□ 2.76
U2AF1-202ENST00000380276 USP47Q96K76 1375 aa32.32■■■□□ 2.76
U2AF1-202ENST00000380276 TFCP2L1Q9NZI6 479 aa32.31■■■□□ 2.76
U2AF1-202ENST00000380276 SHANK3Q9BYB0 1731 aa32.29■■■□□ 2.76
U2AF1-202ENST00000380276 FYB1O15117 783 aa32.29■■■□□ 2.76
U2AF1-202ENST00000380276 POLD1P28340 1107 aa32.28■■■□□ 2.76
U2AF1-202ENST00000380276 NBPF6Q5VWK0 638 aa32.28■■■□□ 2.76
U2AF1-202ENST00000380276 RAPGEF4Q8WZA2 1011 aa32.28■■■□□ 2.76
U2AF1-202ENST00000380276 NBPF4Q96M43 638 aa32.28■■■□□ 2.76
U2AF1-202ENST00000380276 PNPLA7Q6ZV29 1317 aa32.26■■■□□ 2.76
U2AF1-202ENST00000380276 SLC16A10Q8TF71 515 aa32.26■■■□□ 2.75
U2AF1-202ENST00000380276 QSER1Q2KHR3 1735 aa32.26■■■□□ 2.75
U2AF1-202ENST00000380276 NSD2O96028 1365 aa32.25■■■□□ 2.75
U2AF1-202ENST00000380276 CCNL1Q9UK58 526 aaPredicted RBP32.25■■■□□ 2.75
U2AF1-202ENST00000380276 KIF20BQ96Q89 1820 aa32.25■■■□□ 2.75
U2AF1-202ENST00000380276 TUBGCP6Q96RT7 1819 aa32.24■■■□□ 2.75
U2AF1-202ENST00000380276 MSH5O43196 834 aa32.24■■■□□ 2.75
U2AF1-202ENST00000380276 TATP17735 454 aaPredicted RBP32.24■■■□□ 2.75
U2AF1-202ENST00000380276 LY75O60449 1722 aa32.23■■■□□ 2.75
U2AF1-202ENST00000380276 GPR162Q16538 588 aa32.23■■■□□ 2.75
U2AF1-202ENST00000380276 CDCA8Q53HL2 280 aa32.22■■■□□ 2.75
U2AF1-202ENST00000380276 PELP1Q8IZL8 1130 aaKnown RBP32.22■■■□□ 2.75
U2AF1-202ENST00000380276 ZNF784Q8NCA9 323 aaPredicted RBP32.22■■■□□ 2.75
U2AF1-202ENST00000380276 MAP3K5Q99683 1374 aa32.21■■■□□ 2.75
U2AF1-202ENST00000380276 HSP90AB2PQ58FF8 381 aa32.2■■■□□ 2.75
U2AF1-202ENST00000380276 CGNL1Q0VF96 1302 aa32.2■■■□□ 2.74
U2AF1-202ENST00000380276 TRIM26Q12899 539 aaPredicted RBP32.18■■■□□ 2.74
U2AF1-202ENST00000380276 CHD4Q14839 1912 aa32.17■■■□□ 2.74
U2AF1-202ENST00000380276 INSRP06213 1382 aa32.17■■■□□ 2.74
U2AF1-202ENST00000380276 FLT4P35916 1363 aa32.17■■■□□ 2.74
U2AF1-202ENST00000380276 PCDH11XQ9BZA7 1347 aa32.15■■■□□ 2.74
U2AF1-202ENST00000380276 PCDH11YQ9BZA8 1340 aa32.15■■■□□ 2.74
U2AF1-202ENST00000380276 NSD3Q9BZ95 1437 aa32.13■■■□□ 2.73
U2AF1-202ENST00000380276 PPM1GO15355 546 aaPredicted RBP32.12■■■□□ 2.73
U2AF1-202ENST00000380276 COL24A1Q17RW2 1714 aa32.1■■■□□ 2.73
U2AF1-202ENST00000380276 MPRIPQ6WCQ1 1025 aa32.1■■■□□ 2.73
U2AF1-202ENST00000380276 EMILIN1Q9Y6C2 1016 aa32.1■■■□□ 2.73
U2AF1-202ENST00000380276 KIF24Q5T7B8 1368 aa32.09■■■□□ 2.73
U2AF1-202ENST00000380276 MSL1Q68DK7 614 aa32.09■■■□□ 2.73
U2AF1-202ENST00000380276 COL23A1Q86Y22 540 aaPredicted RBP32.09■■■□□ 2.73
U2AF1-202ENST00000380276 NLGN2Q8NFZ4 835 aa32.09■■■□□ 2.73
U2AF1-202ENST00000380276 CARD14Q9BXL6 1004 aa32.08■■■□□ 2.73
U2AF1-202ENST00000380276 C5P01031 1676 aa32.08■■■□□ 2.73
U2AF1-202ENST00000380276 PALLDQ8WX93 1383 aa32.07■■■□□ 2.73
U2AF1-202ENST00000380276 POLR3GLQ9BT43 218 aa32.06■■■□□ 2.72
U2AF1-202ENST00000380276 UTRNP46939 3433 aa32.06■■■□□ 2.72
U2AF1-202ENST00000380276 CYP27B1O15528 508 aa32.03■■■□□ 2.72
U2AF1-202ENST00000380276 TOGARAM1Q9Y4F4 1720 aa32■■■□□ 2.71
U2AF1-202ENST00000380276 HMGB2P26583 209 aaKnown RBP31.99■■■□□ 2.71
U2AF1-202ENST00000380276 AK7Q96M32 723 aa31.99■■■□□ 2.71
U2AF1-202ENST00000380276 PKD1L3Q7Z443 1732 aa31.99■■■□□ 2.71
U2AF1-202ENST00000380276 ITGB4P16144 1822 aa31.98■■■□□ 2.71
U2AF1-202ENST00000380276 SMARCC1Q92922 1105 aaPredicted RBP31.98■■■□□ 2.71
U2AF1-202ENST00000380276 SPG7Q9UQ90 795 aa31.98■■■□□ 2.71
U2AF1-202ENST00000380276 TAF1LQ8IZX4 1826 aa31.98■■■□□ 2.71
U2AF1-202ENST00000380276 FLAD1Q8NFF5 587 aa31.97■■■□□ 2.71
U2AF1-202ENST00000380276 SENP3-EIF4A1A0A087X0R7 540 aa31.95■■■□□ 2.71
U2AF1-202ENST00000380276 PHF14O94880 888 aa31.95■■■□□ 2.71
U2AF1-202ENST00000380276 C4BP0C0L5 1744 aa31.94■■■□□ 2.7
U2AF1-202ENST00000380276 MAP2P11137 1827 aaKnown RBP31.93■■■□□ 2.7
U2AF1-202ENST00000380276 ANKRD26Q9UPS8 1709 aa31.93■■■□□ 2.7
U2AF1-202ENST00000380276 C1QTNF8P60827 252 aa31.93■■■□□ 2.7
U2AF1-202ENST00000380276 PIGBQ92521 554 aa31.93■■■□□ 2.7
U2AF1-202ENST00000380276 GRIN3BO60391 1043 aa31.92■■■□□ 2.7
U2AF1-202ENST00000380276 YBX3P16989 372 aaKnown RBP eCLIP31.92■■■□□ 2.7
U2AF1-202ENST00000380276 TNNT2P45379 298 aaPredicted RBP31.92■■■□□ 2.7
U2AF1-202ENST00000380276 EYA1Q99502 592 aa31.92■■■□□ 2.7
U2AF1-202ENST00000380276 PCGF6Q9BYE7 350 aa31.92■■■□□ 2.7
U2AF1-202ENST00000380276 WASHC2AQ641Q2 1341 aa31.92■■■□□ 2.7
U2AF1-202ENST00000380276 TMOD3Q9NYL9 352 aa31.9■■■□□ 2.7
U2AF1-202ENST00000380276 TIMELESSQ9UNS1 1208 aa31.9■■■□□ 2.7
U2AF1-202ENST00000380276 NCAPD2Q15021 1401 aa31.9■■■□□ 2.7
U2AF1-202ENST00000380276 GIGYF1O75420 1035 aaPredicted RBP31.89■■■□□ 2.7
U2AF1-202ENST00000380276 SMIM5Q71RC9 77 aa31.88■■■□□ 2.69
U2AF1-202ENST00000380276 POLKQ9UBT6 870 aa31.88■■■□□ 2.69
U2AF1-202ENST00000380276 NKX1-1Q15270 411 aaPredicted RBP31.87■■■□□ 2.69
U2AF1-202ENST00000380276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.85■■■□□ 2.69
U2AF1-202ENST00000380276 LOC102724428A0A0B4J2F2 783 aa31.85■■■□□ 2.69
U2AF1-202ENST00000380276 SIK1P57059 783 aa31.85■■■□□ 2.69
U2AF1-202ENST00000380276 AMIGO3Q86WK7 504 aa31.85■■■□□ 2.69
U2AF1-202ENST00000380276 IFNL2Q8IZJ0 200 aa31.85■■■□□ 2.69
U2AF1-202ENST00000380276 CD2APQ9Y5K6 639 aa31.85■■■□□ 2.69
U2AF1-202ENST00000380276 PHKG2P15735 406 aa31.83■■■□□ 2.69
U2AF1-202ENST00000380276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.83■■■□□ 2.69
U2AF1-202ENST00000380276 UBR3Q6ZT12 1888 aa31.82■■■□□ 2.69
U2AF1-202ENST00000380276 EIF4A2Q14240 407 aaKnown RBP31.82■■■□□ 2.68
U2AF1-202ENST00000380276 LINC00116Q8NCU8 138 aa31.82■■■□□ 2.68
U2AF1-202ENST00000380276 ASAP1Q9ULH1 1129 aa31.82■■■□□ 2.68
U2AF1-202ENST00000380276 WWC3Q9ULE0 1092 aa31.81■■■□□ 2.68
U2AF1-202ENST00000380276 ATP6V1AP38606 617 aa31.8■■■□□ 2.68
U2AF1-202ENST00000380276 GNPATO15228 680 aa31.79■■■□□ 2.68
U2AF1-202ENST00000380276 SSFA2P28290 1259 aa31.79■■■□□ 2.68
U2AF1-202ENST00000380276 GOLGB1Q14789 3259 aaKnown RBP31.77■■■□□ 2.68
U2AF1-202ENST00000380276 CLSPNQ9HAW4 1339 aa31.76■■■□□ 2.68
U2AF1-202ENST00000380276 ITPK1Q13572 414 aa31.76■■■□□ 2.67
U2AF1-202ENST00000380276 EIF4G2P78344 907 aaKnown RBP eCLIP31.75■■■□□ 2.67
U2AF1-202ENST00000380276 IGSF1Q8N6C5 1336 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms