RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 KIF16BQ96L93 1317 aa25.43■■□□□ 1.66
PDLIM5-205ENST00000380180 RGPD5Q99666 1765 aa25.43■■□□□ 1.66
PDLIM5-205ENST00000380180 NBPF6Q5VWK0 638 aa25.43■■□□□ 1.66
PDLIM5-205ENST00000380180 NBPF4Q96M43 638 aa25.43■■□□□ 1.66
PDLIM5-205ENST00000380180 CRB1P82279 1406 aa25.43■■□□□ 1.66
PDLIM5-205ENST00000380180 BRPF1P55201 1214 aaPredicted RBP25.42■■□□□ 1.66
PDLIM5-205ENST00000380180 AAMPQ13685 434 aa25.42■■□□□ 1.66
PDLIM5-205ENST00000380180 ZNF335Q9H4Z2 1342 aaPredicted RBP25.42■■□□□ 1.66
PDLIM5-205ENST00000380180 MVPQ14764 893 aaKnown RBP25.42■■□□□ 1.66
PDLIM5-205ENST00000380180 IPO8O15397 1037 aaKnown RBP25.41■■□□□ 1.66
PDLIM5-205ENST00000380180 NPHP3Q7Z494 1330 aa25.41■■□□□ 1.66
PDLIM5-205ENST00000380180 MED1Q15648 1581 aaPredicted RBP25.4■■□□□ 1.66
PDLIM5-205ENST00000380180 HTATSF1O43719 755 aaKnown RBP25.39■■□□□ 1.66
PDLIM5-205ENST00000380180 TCERG1O14776 1098 aaKnown RBP25.39■■□□□ 1.65
PDLIM5-205ENST00000380180 MRPL50Q8N5N7 158 aaKnown RBP25.39■■□□□ 1.65
PDLIM5-205ENST00000380180 GNAT3A8MTJ3 354 aa25.38■■□□□ 1.65
PDLIM5-205ENST00000380180 IGHDP01880 384 aa25.38■■□□□ 1.65
PDLIM5-205ENST00000380180 SKAP1Q86WV1 359 aa25.37■■□□□ 1.65
PDLIM5-205ENST00000380180 LRRC59Q96AG4 307 aaKnown RBP25.37■■□□□ 1.65
PDLIM5-205ENST00000380180 AXIN2Q9Y2T1 843 aa25.36■■□□□ 1.65
PDLIM5-205ENST00000380180 PXDNQ92626 1479 aa25.36■■□□□ 1.65
PDLIM5-205ENST00000380180 ZC3H6P61129 1189 aaKnown RBP25.35■■□□□ 1.65
PDLIM5-205ENST00000380180 KRT24Q2M2I5 525 aa25.35■■□□□ 1.65
PDLIM5-205ENST00000380180 MIS18AQ9NYP9 233 aa25.35■■□□□ 1.65
PDLIM5-205ENST00000380180 LRRC37A3O60309 1634 aa25.35■■□□□ 1.65
PDLIM5-205ENST00000380180 KIAA0232Q92628 1395 aa25.34■■□□□ 1.65
PDLIM5-205ENST00000380180 ANKRD24Q8TF21 1146 aa25.34■■□□□ 1.65
PDLIM5-205ENST00000380180 PCDHB15Q9Y5E8 787 aa25.34■■□□□ 1.65
PDLIM5-205ENST00000380180 MAP3K5Q99683 1374 aa25.34■■□□□ 1.65
PDLIM5-205ENST00000380180 BRINP3Q76B58 766 aa25.34■■□□□ 1.65
PDLIM5-205ENST00000380180 ITPRIPQ8IWB1 547 aa25.34■■□□□ 1.65
PDLIM5-205ENST00000380180 TMEM57Q8N5G2 664 aa25.34■■□□□ 1.65
PDLIM5-205ENST00000380180 TNS3Q68CZ2 1445 aa25.33■■□□□ 1.65
PDLIM5-205ENST00000380180 ARHGAP45Q92619 1136 aa25.33■■□□□ 1.65
PDLIM5-205ENST00000380180 DDX19BQ9UMR2 479 aa25.33■■□□□ 1.65
PDLIM5-205ENST00000380180 IL17REQ8NFR9 667 aa25.32■■□□□ 1.64
PDLIM5-205ENST00000380180 TSPYL4Q9UJ04 414 aa25.32■■□□□ 1.64
PDLIM5-205ENST00000380180 SPATA31A3Q5VYP0 1347 aa25.31■■□□□ 1.64
PDLIM5-205ENST00000380180 HAP1P54257 671 aaPredicted RBP25.3■■□□□ 1.64
PDLIM5-205ENST00000380180 SLAIN2Q9P270 581 aa25.3■■□□□ 1.64
PDLIM5-205ENST00000380180 CABLES1Q8TDN4 633 aa25.3■■□□□ 1.64
PDLIM5-205ENST00000380180 CRYBG1Q9Y4K1 1723 aa25.3■■□□□ 1.64
PDLIM5-205ENST00000380180 CAMTA1Q9Y6Y1 1673 aa25.3■■□□□ 1.64
PDLIM5-205ENST00000380180 NCAPD2Q15021 1401 aa25.29■■□□□ 1.64
PDLIM5-205ENST00000380180 COL18A1P39060 1754 aa25.29■■□□□ 1.64
PDLIM5-205ENST00000380180 VIRMAQ69YN4 1812 aaKnown RBP25.28■■□□□ 1.64
PDLIM5-205ENST00000380180 ERBB3P21860 1342 aa25.26■■□□□ 1.63
PDLIM5-205ENST00000380180 LMO7Q8WWI1 1683 aa25.26■■□□□ 1.63
PDLIM5-205ENST00000380180 PLEKHO1Q53GL0 409 aaPredicted RBP25.25■■□□□ 1.63
PDLIM5-205ENST00000380180 TAF7Q15545 349 aaPredicted RBP25.24■■□□□ 1.63
PDLIM5-205ENST00000380180 RWDD1Q9H446 243 aaPredicted RBP25.24■■□□□ 1.63
PDLIM5-205ENST00000380180 ZBTB40Q9NUA8 1239 aa25.24■■□□□ 1.63
PDLIM5-205ENST00000380180 AMOTQ4VCS5 1084 aa25.22■■□□□ 1.63
PDLIM5-205ENST00000380180 API5Q9BZZ5 524 aaKnown RBP25.22■■□□□ 1.63
PDLIM5-205ENST00000380180 ABCC4O15439 1325 aa25.22■■□□□ 1.63
PDLIM5-205ENST00000380180 CEMIPQ8WUJ3 1361 aa25.22■■□□□ 1.63
PDLIM5-205ENST00000380180 ZNF530Q6P9A1 599 aaPredicted RBP25.22■■□□□ 1.63
PDLIM5-205ENST00000380180 BABAM1Q9NWV8 329 aa25.22■■□□□ 1.63
PDLIM5-205ENST00000380180 PDE4AP27815 886 aa25.21■■□□□ 1.63
PDLIM5-205ENST00000380180 AKAP4Q5JQC9 854 aa25.21■■□□□ 1.63
PDLIM5-205ENST00000380180 LGR6Q9HBX8 967 aa25.21■■□□□ 1.63
PDLIM5-205ENST00000380180 SOS2Q07890 1332 aaPredicted RBP25.2■■□□□ 1.63
PDLIM5-205ENST00000380180 CACNA1FO60840 1977 aa25.2■■□□□ 1.62
PDLIM5-205ENST00000380180 RGS3P49796 1198 aa25.2■■□□□ 1.62
PDLIM5-205ENST00000380180 CHRNA2Q15822 529 aa25.19■■□□□ 1.62
PDLIM5-205ENST00000380180 ZBTB7BO15156 539 aaPredicted RBP25.19■■□□□ 1.62
PDLIM5-205ENST00000380180 BACH2Q9BYV9 841 aa25.18■■□□□ 1.62
PDLIM5-205ENST00000380180 SLC4A2P04920 1241 aa25.17■■□□□ 1.62
PDLIM5-205ENST00000380180 NLRP2Q9NX02 1062 aa25.17■■□□□ 1.62
PDLIM5-205ENST00000380180 CPDO75976 1380 aa25.16■■□□□ 1.62
PDLIM5-205ENST00000380180 ABCC6O95255 1503 aa25.16■■□□□ 1.62
PDLIM5-205ENST00000380180 FAM208AQ9UK61 1670 aaKnown RBP25.16■■□□□ 1.62
PDLIM5-205ENST00000380180 HDAC1Q13547 482 aaPredicted RBP25.16■■□□□ 1.62
PDLIM5-205ENST00000380180 C1orf141Q5JVX7 400 aa25.16■■□□□ 1.62
PDLIM5-205ENST00000380180 MPRIPQ6WCQ1 1025 aa25.15■■□□□ 1.62
PDLIM5-205ENST00000380180 CHMP4BQ9H444 224 aaKnown RBP25.15■■□□□ 1.62
PDLIM5-205ENST00000380180 KDM3BQ7LBC6 1761 aa25.15■■□□□ 1.62
PDLIM5-205ENST00000380180 PTPRCP08575 1304 aa25.14■■□□□ 1.61
PDLIM5-205ENST00000380180 RGS12O14924 1447 aa25.14■■□□□ 1.61
PDLIM5-205ENST00000380180 CSB-PGBD3P0DP91 1061 aa25.13■■□□□ 1.61
PDLIM5-205ENST00000380180 NHSL1Q5SYE7 1610 aa25.13■■□□□ 1.61
PDLIM5-205ENST00000380180 RNMTO43148 476 aaKnown RBP25.12■■□□□ 1.61
PDLIM5-205ENST00000380180 RAPGEF4Q8WZA2 1011 aa25.12■■□□□ 1.61
PDLIM5-205ENST00000380180 TEFQ10587 303 aa25.12■■□□□ 1.61
PDLIM5-205ENST00000380180 PDZRN3Q9UPQ7 1066 aa25.12■■□□□ 1.61
PDLIM5-205ENST00000380180 SOS1Q07889 1333 aaPredicted RBP25.11■■□□□ 1.61
PDLIM5-205ENST00000380180 INTS3Q68E01 1043 aaKnown RBP25.11■■□□□ 1.61
PDLIM5-205ENST00000380180 CCDC30Q5VVM6 783 aa25.1■■□□□ 1.61
PDLIM5-205ENST00000380180 G2E3Q7L622 706 aa25.1■■□□□ 1.61
PDLIM5-205ENST00000380180 ABCA3Q99758 1704 aa25.1■■□□□ 1.61
PDLIM5-205ENST00000380180 STK31Q9BXU1 1019 aa25.1■■□□□ 1.61
PDLIM5-205ENST00000380180 SIPA1L3O60292 1781 aaPredicted RBP25.09■■□□□ 1.61
PDLIM5-205ENST00000380180 TATP17735 454 aaPredicted RBP25.08■■□□□ 1.61
PDLIM5-205ENST00000380180 OVOS2A0A0G2JMS6 1433 aa25.08■■□□□ 1.61
PDLIM5-205ENST00000380180 BTBD11A6QL63 1104 aa25.08■■□□□ 1.61
PDLIM5-205ENST00000380180 NECTIN2Q92692 538 aa25.08■■□□□ 1.61
PDLIM5-205ENST00000380180 ADAMTS7Q9UKP4 1686 aa25.08■■□□□ 1.6
PDLIM5-205ENST00000380180 EIF4A1P60842 406 aaKnown RBP25.07■■□□□ 1.6
PDLIM5-205ENST00000380180 C1orf115Q9H7X2 142 aa25.07■■□□□ 1.6
PDLIM5-205ENST00000380180 PRDM11Q9NQV5 511 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms