RNA–Protein interactions for RNA: ENST00000379995.1

C9orf72-201, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 3

Gene C9orf72, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-201ENST00000379995 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
C9orf72-201ENST00000379995 KCNA4P22459 653 aa13.23□□□□□ -0.29
C9orf72-201ENST00000379995 CACNB1Q02641 598 aaPredicted RBP13.23□□□□□ -0.29
C9orf72-201ENST00000379995 USHBP1Q8N6Y0 703 aa13.23□□□□□ -0.29
C9orf72-201ENST00000379995 SGIP1Q9BQI5 828 aa13.23□□□□□ -0.29
C9orf72-201ENST00000379995 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
C9orf72-201ENST00000379995 SLC27A3Q5K4L6 730 aa13.22□□□□□ -0.29
C9orf72-201ENST00000379995 FHDC1Q9C0D6 1143 aaPredicted RBP13.22□□□□□ -0.29
C9orf72-201ENST00000379995 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
C9orf72-201ENST00000379995 SYT17Q9BSW7 474 aa13.21□□□□□ -0.29
C9orf72-201ENST00000379995 CARD14Q9BXL6 1004 aa13.21□□□□□ -0.29
C9orf72-201ENST00000379995 MEGF6O75095 1541 aa13.21□□□□□ -0.29
C9orf72-201ENST00000379995 NHSQ6T4R5 1651 aa13.21□□□□□ -0.3
C9orf72-201ENST00000379995 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
C9orf72-201ENST00000379995 KCNQ4P56696 695 aa13.2□□□□□ -0.3
C9orf72-201ENST00000379995 RAPGEF4Q8WZA2 1011 aa13.2□□□□□ -0.3
C9orf72-201ENST00000379995 ARXQ96QS3 562 aa13.2□□□□□ -0.3
C9orf72-201ENST00000379995 TIMELESSQ9UNS1 1208 aa13.2□□□□□ -0.3
C9orf72-201ENST00000379995 LTN1O94822 1766 aa13.2□□□□□ -0.3
C9orf72-201ENST00000379995 CGNL1Q0VF96 1302 aa13.19□□□□□ -0.3
C9orf72-201ENST00000379995 TATP17735 454 aaPredicted RBP13.19□□□□□ -0.3
C9orf72-201ENST00000379995 SMG6Q86US8 1419 aaKnown RBP13.19□□□□□ -0.3
C9orf72-201ENST00000379995 NSD2O96028 1365 aa13.19□□□□□ -0.3
C9orf72-201ENST00000379995 INSRP06213 1382 aa13.19□□□□□ -0.3
C9orf72-201ENST00000379995 UTRNP46939 3433 aa13.18□□□□□ -0.3
C9orf72-201ENST00000379995 PCGF6Q9BYE7 350 aa13.18□□□□□ -0.3
C9orf72-201ENST00000379995 TFCP2L1Q9NZI6 479 aa13.18□□□□□ -0.3
C9orf72-201ENST00000379995 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
C9orf72-201ENST00000379995 FLT4P35916 1363 aa13.18□□□□□ -0.3
C9orf72-201ENST00000379995 PNPLA7Q6ZV29 1317 aa13.17□□□□□ -0.3
C9orf72-201ENST00000379995 NSD3Q9BZ95 1437 aa13.17□□□□□ -0.3
C9orf72-201ENST00000379995 SLC16A10Q8TF71 515 aa13.17□□□□□ -0.3
C9orf72-201ENST00000379995 CCNL1Q9UK58 526 aaPredicted RBP13.17□□□□□ -0.3
C9orf72-201ENST00000379995 KIF24Q5T7B8 1368 aa13.17□□□□□ -0.3
C9orf72-201ENST00000379995 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
C9orf72-201ENST00000379995 PPM1GO15355 546 aaPredicted RBP13.15□□□□□ -0.3
C9orf72-201ENST00000379995 POLD1P28340 1107 aa13.15□□□□□ -0.3
C9orf72-201ENST00000379995 POLR3GLQ9BT43 218 aa13.15□□□□□ -0.3
C9orf72-201ENST00000379995 FAM208AQ9UK61 1670 aaKnown RBP13.15□□□□□ -0.31
C9orf72-201ENST00000379995 PCDH11XQ9BZA7 1347 aa13.14□□□□□ -0.31
C9orf72-201ENST00000379995 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
C9orf72-201ENST00000379995 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
C9orf72-201ENST00000379995 CYP27B1O15528 508 aa13.14□□□□□ -0.31
C9orf72-201ENST00000379995 MYOM1P52179 1685 aa13.14□□□□□ -0.31
C9orf72-201ENST00000379995 MAP3K5Q99683 1374 aa13.13□□□□□ -0.31
C9orf72-201ENST00000379995 MPRIPQ6WCQ1 1025 aa13.13□□□□□ -0.31
C9orf72-201ENST00000379995 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
C9orf72-201ENST00000379995 BTAF1O14981 1849 aa13.13□□□□□ -0.31
C9orf72-201ENST00000379995 WASHC2AQ641Q2 1341 aa13.12□□□□□ -0.31
C9orf72-201ENST00000379995 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
C9orf72-201ENST00000379995 COL23A1Q86Y22 540 aaPredicted RBP13.11□□□□□ -0.31
C9orf72-201ENST00000379995 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
C9orf72-201ENST00000379995 PALLDQ8WX93 1383 aa13.1□□□□□ -0.31
C9orf72-201ENST00000379995 EYA1Q99502 592 aa13.1□□□□□ -0.31
C9orf72-201ENST00000379995 TNNT2P45379 298 aaPredicted RBP13.09□□□□□ -0.31
C9orf72-201ENST00000379995 NKX1-1Q15270 411 aaPredicted RBP13.09□□□□□ -0.31
C9orf72-201ENST00000379995 GPR162Q16538 588 aa13.09□□□□□ -0.31
C9orf72-201ENST00000379995 ZNF784Q8NCA9 323 aaPredicted RBP13.09□□□□□ -0.31
C9orf72-201ENST00000379995 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
C9orf72-201ENST00000379995 HSPA5P11021 654 aaKnown RBP13.08□□□□□ -0.32
C9orf72-201ENST00000379995 HMGB2P26583 209 aaKnown RBP13.08□□□□□ -0.32
C9orf72-201ENST00000379995 EIF4G2P78344 907 aaKnown RBP eCLIP13.08□□□□□ -0.32
C9orf72-201ENST00000379995 PIGBQ92521 554 aa13.08□□□□□ -0.32
C9orf72-201ENST00000379995 SMARCC1Q92922 1105 aaPredicted RBP13.08□□□□□ -0.32
C9orf72-201ENST00000379995 NCAPD2Q15021 1401 aa13.07□□□□□ -0.32
C9orf72-201ENST00000379995 EIF4A2Q14240 407 aaKnown RBP13.07□□□□□ -0.32
C9orf72-201ENST00000379995 MSL1Q68DK7 614 aa13.07□□□□□ -0.32
C9orf72-201ENST00000379995 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
C9orf72-201ENST00000379995 NLGN2Q8NFZ4 835 aa13.07□□□□□ -0.32
C9orf72-201ENST00000379995 PANK3Q9H999 370 aa13.07□□□□□ -0.32
C9orf72-201ENST00000379995 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.322e-6■■□□□ 14.4
C9orf72-201ENST00000379995 DOT1LQ8TEK3 1739 aa13.06□□□□□ -0.32
C9orf72-201ENST00000379995 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
C9orf72-201ENST00000379995 SHANK3Q9BYB0 1731 aa13.05□□□□□ -0.32
C9orf72-201ENST00000379995 PHKG2P15735 406 aa13.05□□□□□ -0.32
C9orf72-201ENST00000379995 IFNL2Q8IZJ0 200 aa13.05□□□□□ -0.32
C9orf72-201ENST00000379995 AK7Q96M32 723 aa13.05□□□□□ -0.32
C9orf72-201ENST00000379995 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
C9orf72-201ENST00000379995 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
C9orf72-201ENST00000379995 AMIGO3Q86WK7 504 aa13.04□□□□□ -0.32
C9orf72-201ENST00000379995 CCER1Q8TC90 406 aaPredicted RBP13.04□□□□□ -0.32
C9orf72-201ENST00000379995 LOC102724428A0A0B4J2F2 783 aa13.03□□□□□ -0.32
C9orf72-201ENST00000379995 SIK1P57059 783 aa13.03□□□□□ -0.32
C9orf72-201ENST00000379995 SMIM5Q71RC9 77 aa13.03□□□□□ -0.32
C9orf72-201ENST00000379995 ASAP1Q9ULH1 1129 aa13.03□□□□□ -0.32
C9orf72-201ENST00000379995 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.32
C9orf72-201ENST00000379995 KAT6BQ8WYB5 2073 aa13.02□□□□□ -0.33
C9orf72-201ENST00000379995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
C9orf72-201ENST00000379995 PHF14O94880 888 aa13.02□□□□□ -0.33
C9orf72-201ENST00000379995 LINC00116Q8NCU8 138 aa13.02□□□□□ -0.33
C9orf72-201ENST00000379995 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.33
C9orf72-201ENST00000379995 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
C9orf72-201ENST00000379995 IGSF1Q8N6C5 1336 aa13.01□□□□□ -0.33
C9orf72-201ENST00000379995 LY75O60449 1722 aa13.01□□□□□ -0.33
C9orf72-201ENST00000379995 GRIN3BO60391 1043 aa13□□□□□ -0.33
C9orf72-201ENST00000379995 SSFA2P28290 1259 aa13□□□□□ -0.33
C9orf72-201ENST00000379995 ATP6V1AP38606 617 aa13□□□□□ -0.33
C9orf72-201ENST00000379995 ITPK1Q13572 414 aa13□□□□□ -0.33
C9orf72-201ENST00000379995 MORC1Q86VD1 984 aa13□□□□□ -0.33
C9orf72-201ENST00000379995 CD2APQ9Y5K6 639 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms