RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 VPS72Q15906 364 aa18.6■□□□□ 0.57
HERPUD1-203ENST00000379792 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
HERPUD1-203ENST00000379792 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
HERPUD1-203ENST00000379792 RIPK4P57078 832 aa18.59■□□□□ 0.57
HERPUD1-203ENST00000379792 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
HERPUD1-203ENST00000379792 FAM208AQ9UK61 1670 aaKnown RBP18.58■□□□□ 0.57
HERPUD1-203ENST00000379792 NRAPQ86VF7 1730 aa18.58■□□□□ 0.57
HERPUD1-203ENST00000379792 TATP17735 454 aaPredicted RBP18.58■□□□□ 0.56
HERPUD1-203ENST00000379792 GLI3P10071 1580 aa18.57■□□□□ 0.56
HERPUD1-203ENST00000379792 MEGF6O75095 1541 aa18.57■□□□□ 0.56
HERPUD1-203ENST00000379792 ZBED9Q6R2W3 1325 aa18.57■□□□□ 0.56
HERPUD1-203ENST00000379792 PLEKHO1Q53GL0 409 aaPredicted RBP18.55■□□□□ 0.56
HERPUD1-203ENST00000379792 TRIM35Q9UPQ4 493 aa18.55■□□□□ 0.56
HERPUD1-203ENST00000379792 SPATA31A1Q5TZJ5 1347 aa18.55■□□□□ 0.56
HERPUD1-203ENST00000379792 SPATA31A5Q5VU36 1347 aa18.55■□□□□ 0.56
HERPUD1-203ENST00000379792 SPATA31A7Q8IWB4 1347 aa18.55■□□□□ 0.56
HERPUD1-203ENST00000379792 IL2RBP14784 551 aa18.55■□□□□ 0.56
HERPUD1-203ENST00000379792 WWC1Q8IX03 1113 aa18.54■□□□□ 0.56
HERPUD1-203ENST00000379792 ZNF530Q6P9A1 599 aaPredicted RBP18.53■□□□□ 0.56
HERPUD1-203ENST00000379792 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
HERPUD1-203ENST00000379792 ONECUT3O60422 494 aaPredicted RBP18.53■□□□□ 0.56
HERPUD1-203ENST00000379792 DCTN1Q14203 1278 aa18.53■□□□□ 0.56
HERPUD1-203ENST00000379792 AMOTQ4VCS5 1084 aa18.53■□□□□ 0.56
HERPUD1-203ENST00000379792 THUMPD2Q9BTF0 503 aaKnown RBP18.53■□□□□ 0.56
HERPUD1-203ENST00000379792 NGEFQ8N5V2 710 aa18.51■□□□□ 0.55
HERPUD1-203ENST00000379792 SPG7Q9UQ90 795 aa18.51■□□□□ 0.55
HERPUD1-203ENST00000379792 CCDC27Q2M243 656 aa18.5■□□□□ 0.55
HERPUD1-203ENST00000379792 MCM10Q7L590 875 aa18.5■□□□□ 0.55
HERPUD1-203ENST00000379792 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
HERPUD1-203ENST00000379792 UPF1Q92900 1129 aaKnown RBP eCLIP18.5■□□□□ 0.55
HERPUD1-203ENST00000379792 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
HERPUD1-203ENST00000379792 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
HERPUD1-203ENST00000379792 OVOS2A0A0G2JMS6 1433 aa18.5■□□□□ 0.55
HERPUD1-203ENST00000379792 FAM98CQ17RN3 349 aaKnown RBP18.5■□□□□ 0.55
HERPUD1-203ENST00000379792 GNAT3A8MTJ3 354 aa18.49■□□□□ 0.55
HERPUD1-203ENST00000379792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.49■□□□□ 0.55
HERPUD1-203ENST00000379792 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
HERPUD1-203ENST00000379792 DISP2A7MBM2 1401 aa18.48■□□□□ 0.55
HERPUD1-203ENST00000379792 C1orf141Q5JVX7 400 aa18.48■□□□□ 0.55
HERPUD1-203ENST00000379792 DDX54Q8TDD1 881 aaKnown RBP18.48■□□□□ 0.55
HERPUD1-203ENST00000379792 MAP3K5Q99683 1374 aa18.48■□□□□ 0.55
HERPUD1-203ENST00000379792 CYP27B1O15528 508 aa18.47■□□□□ 0.55
HERPUD1-203ENST00000379792 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
HERPUD1-203ENST00000379792 MPRIPQ6WCQ1 1025 aa18.47■□□□□ 0.55
HERPUD1-203ENST00000379792 RTF1Q92541 710 aaKnown RBP18.47■□□□□ 0.55
HERPUD1-203ENST00000379792 SPINK5Q9NQ38 1064 aaPredicted RBP18.47■□□□□ 0.55
HERPUD1-203ENST00000379792 GOLGA2Q08379 1002 aa18.47■□□□□ 0.55
HERPUD1-203ENST00000379792 LMOD3Q0VAK6 560 aa18.47■□□□□ 0.55
HERPUD1-203ENST00000379792 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
HERPUD1-203ENST00000379792 SEPT12Q8IYM1 358 aa18.47■□□□□ 0.55
HERPUD1-203ENST00000379792 PHKG2P15735 406 aa18.46■□□□□ 0.55
HERPUD1-203ENST00000379792 BARGINQ6ZT62 677 aa18.46■□□□□ 0.55
HERPUD1-203ENST00000379792 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
HERPUD1-203ENST00000379792 LGR6Q9HBX8 967 aa18.46■□□□□ 0.55
HERPUD1-203ENST00000379792 DLG5Q8TDM6 1919 aa18.46■□□□□ 0.55
HERPUD1-203ENST00000379792 WDR63Q8IWG1 891 aa18.45■□□□□ 0.54
HERPUD1-203ENST00000379792 A0A0G2JS52 829 aa18.45■□□□□ 0.54
HERPUD1-203ENST00000379792 EXOC5O00471 708 aa18.45■□□□□ 0.54
HERPUD1-203ENST00000379792 MYT1Q01538 1121 aa18.45■□□□□ 0.54
HERPUD1-203ENST00000379792 IFNL2Q8IZJ0 200 aa18.45■□□□□ 0.54
HERPUD1-203ENST00000379792 LAS1LQ9Y4W2 734 aaKnown RBP18.45■□□□□ 0.54
HERPUD1-203ENST00000379792 PARP4Q9UKK3 1724 aaKnown RBP18.44■□□□□ 0.54
HERPUD1-203ENST00000379792 HTATSF1O43719 755 aaKnown RBP18.44■□□□□ 0.54
HERPUD1-203ENST00000379792 CDCA7Q9BWT1 371 aaPredicted RBP18.44■□□□□ 0.54
HERPUD1-203ENST00000379792 PCDH11XQ9BZA7 1347 aa18.43■□□□□ 0.54
HERPUD1-203ENST00000379792 PCDH11YQ9BZA8 1340 aa18.43■□□□□ 0.54
HERPUD1-203ENST00000379792 BRWD3Q6RI45 1802 aa18.43■□□□□ 0.54
HERPUD1-203ENST00000379792 SLFN5Q08AF3 891 aa18.42■□□□□ 0.54
HERPUD1-203ENST00000379792 PDE3BQ13370 1112 aa18.42■□□□□ 0.54
HERPUD1-203ENST00000379792 DDB1Q16531 1140 aa18.42■□□□□ 0.54
HERPUD1-203ENST00000379792 PKD1L3Q7Z443 1732 aa18.42■□□□□ 0.54
HERPUD1-203ENST00000379792 RNMTO43148 476 aaKnown RBP18.42■□□□□ 0.54
HERPUD1-203ENST00000379792 PLEKHG2Q9H7P9 1386 aa18.42■□□□□ 0.54
HERPUD1-203ENST00000379792 THSD7AQ9UPZ6 1657 aa18.42■□□□□ 0.54
HERPUD1-203ENST00000379792 KRT27Q7Z3Y8 459 aa18.4■□□□□ 0.54
HERPUD1-203ENST00000379792 CCDC125Q86Z20 511 aa18.4■□□□□ 0.54
HERPUD1-203ENST00000379792 MIS18AQ9NYP9 233 aa18.4■□□□□ 0.54
HERPUD1-203ENST00000379792 E9PSI1 815 aa18.4■□□□□ 0.54
HERPUD1-203ENST00000379792 CENPBP07199 599 aaPredicted RBP18.4■□□□□ 0.54
HERPUD1-203ENST00000379792 TSR2Q969E8 191 aaKnown RBP18.4■□□□□ 0.54
HERPUD1-203ENST00000379792 CALD1Q05682 793 aaKnown RBP18.39■□□□□ 0.53
HERPUD1-203ENST00000379792 KDM6AO15550 1401 aaPredicted RBP18.39■□□□□ 0.53
HERPUD1-203ENST00000379792 TNS2Q63HR2 1409 aa18.39■□□□□ 0.53
HERPUD1-203ENST00000379792 WNK3Q9BYP7 1800 aa18.39■□□□□ 0.53
HERPUD1-203ENST00000379792 IL16Q14005 1332 aa18.39■□□□□ 0.53
HERPUD1-203ENST00000379792 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
HERPUD1-203ENST00000379792 DCAF5Q96JK2 942 aa18.38■□□□□ 0.53
HERPUD1-203ENST00000379792 CEMIPQ8WUJ3 1361 aa18.38■□□□□ 0.53
HERPUD1-203ENST00000379792 HSP90AB1P08238 724 aaKnown RBP18.37■□□□□ 0.53
HERPUD1-203ENST00000379792 TRMT2AQ8IZ69 625 aaKnown RBP18.37■□□□□ 0.53
HERPUD1-203ENST00000379792 MARCH10Q8NA82 808 aaPredicted RBP18.37■□□□□ 0.53
HERPUD1-203ENST00000379792 SHANK3Q9BYB0 1731 aa18.37■□□□□ 0.53
HERPUD1-203ENST00000379792 TEFQ10587 303 aa18.37■□□□□ 0.53
HERPUD1-203ENST00000379792 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
HERPUD1-203ENST00000379792 EP400Q96L91 3159 aa18.36■□□□□ 0.53
HERPUD1-203ENST00000379792 ZNF853P0CG23 659 aa18.36■□□□□ 0.53
HERPUD1-203ENST00000379792 GNAI1P63096 354 aa18.36■□□□□ 0.53
HERPUD1-203ENST00000379792 NKX1-1Q15270 411 aaPredicted RBP18.36■□□□□ 0.53
HERPUD1-203ENST00000379792 TAF7Q15545 349 aaPredicted RBP18.36■□□□□ 0.53
HERPUD1-203ENST00000379792 CFAP44Q96MT7 982 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms