RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 MAP3K19Q56UN5 1328 aa25.11■■□□□ 1.61
PDLIM4-202ENST00000379018 QSER1Q2KHR3 1735 aa25.1■■□□□ 1.61
PDLIM4-202ENST00000379018 MSH5O43196 834 aa25.1■■□□□ 1.61
PDLIM4-202ENST00000379018 HOXC9P31274 260 aa25.1■■□□□ 1.61
PDLIM4-202ENST00000379018 SLC16A10Q8TF71 515 aa25.09■■□□□ 1.61
PDLIM4-202ENST00000379018 ANKRD36BQ8N2N9 1353 aa25.08■■□□□ 1.61
PDLIM4-202ENST00000379018 NLGN2Q8NFZ4 835 aa25.08■■□□□ 1.61
PDLIM4-202ENST00000379018 MEGF6O75095 1541 aa25.07■■□□□ 1.6
PDLIM4-202ENST00000379018 SHANK3Q9BYB0 1731 aa25.07■■□□□ 1.6
PDLIM4-202ENST00000379018 C1QTNF8P60827 252 aa25.07■■□□□ 1.6
PDLIM4-202ENST00000379018 ZCRB1Q8TBF4 217 aaKnown RBP25.07■■□□□ 1.6
PDLIM4-202ENST00000379018 CCNL1Q9UK58 526 aaPredicted RBP25.07■■□□□ 1.6
PDLIM4-202ENST00000379018 USHBP1Q8N6Y0 703 aa25.06■■□□□ 1.6
PDLIM4-202ENST00000379018 NSD2O96028 1365 aa25.05■■□□□ 1.6
PDLIM4-202ENST00000379018 RRS1Q15050 365 aaKnown RBP25.05■■□□□ 1.6
PDLIM4-202ENST00000379018 LY75O60449 1722 aa25.05■■□□□ 1.6
PDLIM4-202ENST00000379018 ST20-MTHFSA0A0A6YYL1 179 aa25.04■■□□□ 1.6
PDLIM4-202ENST00000379018 MSL1Q68DK7 614 aa25.03■■□□□ 1.6
PDLIM4-202ENST00000379018 PUS7Q96PZ0 661 aaKnown RBP25.02■■□□□ 1.6
PDLIM4-202ENST00000379018 GIGYF1O75420 1035 aaPredicted RBP25.01■■□□□ 1.59
PDLIM4-202ENST00000379018 USP47Q96K76 1375 aa25.01■■□□□ 1.59
PDLIM4-202ENST00000379018 COL24A1Q17RW2 1714 aa25■■□□□ 1.59
PDLIM4-202ENST00000379018 NBPF6Q5VWK0 638 aa25■■□□□ 1.59
PDLIM4-202ENST00000379018 NBPF4Q96M43 638 aa25■■□□□ 1.59
PDLIM4-202ENST00000379018 TESK2Q96S53 571 aa25■■□□□ 1.59
PDLIM4-202ENST00000379018 GGNBP2Q9H3C7 697 aa24.99■■□□□ 1.59
PDLIM4-202ENST00000379018 COL23A1Q86Y22 540 aaPredicted RBP24.98■■□□□ 1.59
PDLIM4-202ENST00000379018 RAPGEF4Q8WZA2 1011 aa24.98■■□□□ 1.59
PDLIM4-202ENST00000379018 GOLGB1Q14789 3259 aaKnown RBP24.98■■□□□ 1.59
PDLIM4-202ENST00000379018 SMG6Q86US8 1419 aaKnown RBP24.97■■□□□ 1.59
PDLIM4-202ENST00000379018 RTL1A6NKG5 1358 aa24.97■■□□□ 1.59
PDLIM4-202ENST00000379018 YBX3P16989 372 aaKnown RBP eCLIP24.96■■□□□ 1.592e-6■■■□□ 15.1
PDLIM4-202ENST00000379018 TATP17735 454 aaPredicted RBP24.94■■□□□ 1.58
PDLIM4-202ENST00000379018 C5P01031 1676 aa24.94■■□□□ 1.58
PDLIM4-202ENST00000379018 FYB1O15117 783 aa24.91■■□□□ 1.58
PDLIM4-202ENST00000379018 MPRIPQ6WCQ1 1025 aa24.91■■□□□ 1.58
PDLIM4-202ENST00000379018 GRIN3BO60391 1043 aa24.9■■□□□ 1.58
PDLIM4-202ENST00000379018 HSP90AB2PQ58FF8 381 aa24.9■■□□□ 1.58
PDLIM4-202ENST00000379018 PALLDQ8WX93 1383 aa24.9■■□□□ 1.58
PDLIM4-202ENST00000379018 CGNL1Q0VF96 1302 aa24.89■■□□□ 1.58
PDLIM4-202ENST00000379018 PCDH11XQ9BZA7 1347 aa24.89■■□□□ 1.58
PDLIM4-202ENST00000379018 PCDH11YQ9BZA8 1340 aa24.89■■□□□ 1.58
PDLIM4-202ENST00000379018 KIF20BQ96Q89 1820 aa24.89■■□□□ 1.57
PDLIM4-202ENST00000379018 WWC3Q9ULE0 1092 aa24.88■■□□□ 1.57
PDLIM4-202ENST00000379018 TMF1P82094 1093 aa24.87■■□□□ 1.57
PDLIM4-202ENST00000379018 TAF1LQ8IZX4 1826 aa24.86■■□□□ 1.57
PDLIM4-202ENST00000379018 PHF14O94880 888 aa24.86■■□□□ 1.57
PDLIM4-202ENST00000379018 FLT4P35916 1363 aa24.85■■□□□ 1.57
PDLIM4-202ENST00000379018 SLC24A1O60721 1099 aa24.85■■□□□ 1.57
PDLIM4-202ENST00000379018 TOGARAM1Q9Y4F4 1720 aa24.84■■□□□ 1.57
PDLIM4-202ENST00000379018 INSRP06213 1382 aa24.84■■□□□ 1.57
PDLIM4-202ENST00000379018 SMIM5Q71RC9 77 aa24.84■■□□□ 1.57
PDLIM4-202ENST00000379018 AK7Q96M32 723 aa24.84■■□□□ 1.57
PDLIM4-202ENST00000379018 ATP10DQ9P241 1426 aa24.84■■□□□ 1.57
PDLIM4-202ENST00000379018 PPM1GO15355 546 aaPredicted RBP24.83■■□□□ 1.57
PDLIM4-202ENST00000379018 CYP27B1O15528 508 aa24.83■■□□□ 1.57
PDLIM4-202ENST00000379018 ITGB4P16144 1822 aa24.83■■□□□ 1.57
PDLIM4-202ENST00000379018 C4BP0C0L5 1744 aa24.82■■□□□ 1.56
PDLIM4-202ENST00000379018 ZNF526Q8TF50 670 aaPredicted RBP24.82■■□□□ 1.56
PDLIM4-202ENST00000379018 EMILIN1Q9Y6C2 1016 aa24.82■■□□□ 1.56
PDLIM4-202ENST00000379018 FLAD1Q8NFF5 587 aa24.81■■□□□ 1.56
PDLIM4-202ENST00000379018 AMIGO3Q86WK7 504 aa24.8■■□□□ 1.56
PDLIM4-202ENST00000379018 CD2APQ9Y5K6 639 aa24.8■■□□□ 1.56
PDLIM4-202ENST00000379018 SMARCC1Q92922 1105 aaPredicted RBP24.78■■□□□ 1.56
PDLIM4-202ENST00000379018 GPBP1L1Q9HC44 474 aaPredicted RBP24.77■■□□□ 1.56
PDLIM4-202ENST00000379018 PKD1L3Q7Z443 1732 aa24.77■■□□□ 1.56
PDLIM4-202ENST00000379018 NSD3Q9BZ95 1437 aa24.77■■□□□ 1.56
PDLIM4-202ENST00000379018 PIGBQ92521 554 aa24.76■■□□□ 1.55
PDLIM4-202ENST00000379018 UBR3Q6ZT12 1888 aa24.76■■□□□ 1.55
PDLIM4-202ENST00000379018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.75■■□□□ 1.55
PDLIM4-202ENST00000379018 HMGB2P26583 209 aaKnown RBP24.75■■□□□ 1.55
PDLIM4-202ENST00000379018 IGSF1Q8N6C5 1336 aa24.75■■□□□ 1.55
PDLIM4-202ENST00000379018 CDCA8Q53HL2 280 aa24.74■■□□□ 1.55
PDLIM4-202ENST00000379018 KIF24Q5T7B8 1368 aa24.74■■□□□ 1.55
PDLIM4-202ENST00000379018 LINC00116Q8NCU8 138 aa24.73■■□□□ 1.55
PDLIM4-202ENST00000379018 SPG7Q9UQ90 795 aa24.73■■□□□ 1.55
PDLIM4-202ENST00000379018 CEP350Q5VT06 3117 aa24.72■■□□□ 1.55
PDLIM4-202ENST00000379018 CARD14Q9BXL6 1004 aa24.72■■□□□ 1.55
PDLIM4-202ENST00000379018 LOC102724428A0A0B4J2F2 783 aa24.71■■□□□ 1.55
PDLIM4-202ENST00000379018 SIK1P57059 783 aa24.71■■□□□ 1.55
PDLIM4-202ENST00000379018 TMOD3Q9NYL9 352 aa24.71■■□□□ 1.55
PDLIM4-202ENST00000379018 GNPATO15228 680 aa24.7■■□□□ 1.54
PDLIM4-202ENST00000379018 MAP2P11137 1827 aaKnown RBP24.68■■□□□ 1.54
PDLIM4-202ENST00000379018 SSFA2P28290 1259 aa24.68■■□□□ 1.54
PDLIM4-202ENST00000379018 POLR3GLQ9BT43 218 aa24.68■■□□□ 1.54
PDLIM4-202ENST00000379018 ASAP1Q9ULH1 1129 aa24.68■■□□□ 1.54
PDLIM4-202ENST00000379018 ADCY9O60503 1353 aa24.67■■□□□ 1.54
PDLIM4-202ENST00000379018 ATP6V1AP38606 617 aa24.67■■□□□ 1.54
PDLIM4-202ENST00000379018 EYA1Q99502 592 aa24.67■■□□□ 1.54
PDLIM4-202ENST00000379018 ITPK1Q13572 414 aa24.66■■□□□ 1.54
PDLIM4-202ENST00000379018 NKX1-1Q15270 411 aaPredicted RBP24.66■■□□□ 1.54
PDLIM4-202ENST00000379018 TNNT2P45379 298 aaPredicted RBP24.65■■□□□ 1.54
PDLIM4-202ENST00000379018 ANKRD26Q9UPS8 1709 aa24.64■■□□□ 1.54
PDLIM4-202ENST00000379018 NCAPD2Q15021 1401 aa24.64■■□□□ 1.54
PDLIM4-202ENST00000379018 PHKG2P15735 406 aa24.63■■□□□ 1.53
PDLIM4-202ENST00000379018 IFFO2Q5TF58 517 aa24.63■■□□□ 1.53
PDLIM4-202ENST00000379018 IFNL2Q8IZJ0 200 aa24.63■■□□□ 1.53
PDLIM4-202ENST00000379018 WASHC2AQ641Q2 1341 aa24.62■■□□□ 1.53
PDLIM4-202ENST00000379018 MMP10P09238 476 aa24.62■■□□□ 1.53
PDLIM4-202ENST00000379018 HSPA6P17066 643 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms