RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 RTF1Q92541 710 aaKnown RBP22.67■■□□□ 1.22
LYSMD4-203ENST00000378904 AHDC1Q5TGY3 1603 aaPredicted RBP22.67■■□□□ 1.22
LYSMD4-203ENST00000378904 FAM208AQ9UK61 1670 aaKnown RBP22.67■■□□□ 1.22
LYSMD4-203ENST00000378904 RBM19Q9Y4C8 960 aaKnown RBP22.66■■□□□ 1.22
LYSMD4-203ENST00000378904 HTATSF1O43719 755 aaKnown RBP22.65■■□□□ 1.22
LYSMD4-203ENST00000378904 HAP1P54257 671 aaPredicted RBP22.65■■□□□ 1.22
LYSMD4-203ENST00000378904 GNAT3A8MTJ3 354 aa22.64■■□□□ 1.22
LYSMD4-203ENST00000378904 CRB1P82279 1406 aa22.64■■□□□ 1.22
LYSMD4-203ENST00000378904 LRRC37A3O60309 1634 aa22.63■■□□□ 1.21
LYSMD4-203ENST00000378904 MAP3K5Q99683 1374 aa22.63■■□□□ 1.21
LYSMD4-203ENST00000378904 CRBNQ96SW2 442 aa22.63■■□□□ 1.21
LYSMD4-203ENST00000378904 BCL2L13Q9BXK5 485 aa22.63■■□□□ 1.21
LYSMD4-203ENST00000378904 B4GALNT3Q6L9W6 998 aa22.63■■□□□ 1.21
LYSMD4-203ENST00000378904 PRDM11Q9NQV5 511 aa22.62■■□□□ 1.21
LYSMD4-203ENST00000378904 NLRP2Q9NX02 1062 aa22.61■■□□□ 1.21
LYSMD4-203ENST00000378904 CHL1O00533 1208 aa22.61■■□□□ 1.21
LYSMD4-203ENST00000378904 CSB-PGBD3P0DP91 1061 aa22.61■■□□□ 1.21
LYSMD4-203ENST00000378904 CANXP27824 592 aaKnown RBP22.6■■□□□ 1.21
LYSMD4-203ENST00000378904 PLEKHO1Q53GL0 409 aaPredicted RBP22.6■■□□□ 1.21
LYSMD4-203ENST00000378904 FRAT1Q92837 279 aaPredicted RBP22.6■■□□□ 1.21
LYSMD4-203ENST00000378904 AMOTQ4VCS5 1084 aa22.59■■□□□ 1.21
LYSMD4-203ENST00000378904 SSH1Q8WYL5 1049 aa22.58■■□□□ 1.21
LYSMD4-203ENST00000378904 SMC4Q9NTJ3 1288 aa22.58■■□□□ 1.21
LYSMD4-203ENST00000378904 TSPYL6Q8N831 410 aa22.58■■□□□ 1.2
LYSMD4-203ENST00000378904 PHLPP1O60346 1717 aa22.57■■□□□ 1.2
LYSMD4-203ENST00000378904 VIRMAQ69YN4 1812 aaKnown RBP22.57■■□□□ 1.2
LYSMD4-203ENST00000378904 VAMP4O75379 141 aa22.57■■□□□ 1.2
LYSMD4-203ENST00000378904 IL17REQ8NFR9 667 aa22.57■■□□□ 1.2
LYSMD4-203ENST00000378904 ZNF428Q96B54 188 aa22.57■■□□□ 1.2
LYSMD4-203ENST00000378904 COL22A1Q8NFW1 1626 aaPredicted RBP22.57■■□□□ 1.2
LYSMD4-203ENST00000378904 PDE3AQ14432 1141 aa22.57■■□□□ 1.2
LYSMD4-203ENST00000378904 CCDC136Q96JN2 1154 aa22.57■■□□□ 1.2
LYSMD4-203ENST00000378904 ALDH1L2Q3SY69 923 aa22.56■■□□□ 1.2
LYSMD4-203ENST00000378904 ZNF530Q6P9A1 599 aaPredicted RBP22.56■■□□□ 1.2
LYSMD4-203ENST00000378904 C8orf58Q8NAV2 365 aa22.56■■□□□ 1.2
LYSMD4-203ENST00000378904 TOM1O60784 492 aa22.55■■□□□ 1.2
LYSMD4-203ENST00000378904 TWISTNBQ3B726 338 aaPredicted RBP22.55■■□□□ 1.2
LYSMD4-203ENST00000378904 ELL2O00472 640 aaPredicted RBP22.55■■□□□ 1.2
LYSMD4-203ENST00000378904 AKAP4Q5JQC9 854 aa22.55■■□□□ 1.2
LYSMD4-203ENST00000378904 AEBP2Q6ZN18 517 aaPredicted RBP22.55■■□□□ 1.2
LYSMD4-203ENST00000378904 COL5A2P05997 1499 aaPredicted RBP22.55■■□□□ 1.2
LYSMD4-203ENST00000378904 RAPGEF4Q8WZA2 1011 aa22.54■■□□□ 1.2
LYSMD4-203ENST00000378904 MIS18AQ9NYP9 233 aa22.54■■□□□ 1.2
LYSMD4-203ENST00000378904 TSPYL4Q9UJ04 414 aa22.54■■□□□ 1.2
LYSMD4-203ENST00000378904 COL16A1Q07092 1604 aaPredicted RBP22.54■■□□□ 1.2
LYSMD4-203ENST00000378904 WDR17Q8IZU2 1322 aa22.53■■□□□ 1.2
LYSMD4-203ENST00000378904 CEMIPQ8WUJ3 1361 aa22.53■■□□□ 1.2
LYSMD4-203ENST00000378904 MEGF6O75095 1541 aa22.52■■□□□ 1.2
LYSMD4-203ENST00000378904 ZKSCAN2Q63HK3 967 aa22.52■■□□□ 1.2
LYSMD4-203ENST00000378904 PANK1Q8TE04 598 aa22.52■■□□□ 1.2
LYSMD4-203ENST00000378904 TATP17735 454 aaPredicted RBP22.51■■□□□ 1.19
LYSMD4-203ENST00000378904 C1orf141Q5JVX7 400 aa22.51■■□□□ 1.19
LYSMD4-203ENST00000378904 PIP4K2BP78356 416 aa22.51■■□□□ 1.19
LYSMD4-203ENST00000378904 TNNQ9UQP3 1299 aa22.51■■□□□ 1.19
LYSMD4-203ENST00000378904 KRT24Q2M2I5 525 aa22.5■■□□□ 1.19
LYSMD4-203ENST00000378904 LGR6Q9HBX8 967 aa22.5■■□□□ 1.19
LYSMD4-203ENST00000378904 TAF7Q15545 349 aaPredicted RBP22.49■■□□□ 1.19
LYSMD4-203ENST00000378904 KIF16BQ96L93 1317 aa22.49■■□□□ 1.19
LYSMD4-203ENST00000378904 PLEKHG2Q9H7P9 1386 aa22.49■■□□□ 1.19
LYSMD4-203ENST00000378904 BRPF1P55201 1214 aaPredicted RBP22.49■■□□□ 1.19
LYSMD4-203ENST00000378904 TOM1L2Q6ZVM7 507 aa22.49■■□□□ 1.19
LYSMD4-203ENST00000378904 NOB1Q9ULX3 412 aaKnown RBP22.49■■□□□ 1.19
LYSMD4-203ENST00000378904 PKD1L3Q7Z443 1732 aa22.48■■□□□ 1.19
LYSMD4-203ENST00000378904 MPRIPQ6WCQ1 1025 aa22.48■■□□□ 1.19
LYSMD4-203ENST00000378904 BABAM1Q9NWV8 329 aa22.48■■□□□ 1.19
LYSMD4-203ENST00000378904 RLBP1P12271 317 aa22.48■■□□□ 1.19
LYSMD4-203ENST00000378904 CLUAP1Q96AJ1 413 aa22.48■■□□□ 1.19
LYSMD4-203ENST00000378904 COG6Q9Y2V7 657 aa22.48■■□□□ 1.19
LYSMD4-203ENST00000378904 COL14A1Q05707 1796 aaKnown RBP22.48■■□□□ 1.19
LYSMD4-203ENST00000378904 PARP4Q9UKK3 1724 aaKnown RBP22.47■■□□□ 1.19
LYSMD4-203ENST00000378904 MRPL50Q8N5N7 158 aaKnown RBP22.47■■□□□ 1.19
LYSMD4-203ENST00000378904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.47■■□□□ 1.19
LYSMD4-203ENST00000378904 ADAMTS7Q9UKP4 1686 aa22.47■■□□□ 1.19
LYSMD4-203ENST00000378904 UBAP1LF5GYI3 381 aa22.46■■□□□ 1.19
LYSMD4-203ENST00000378904 BCL11AQ9H165 835 aa22.46■■□□□ 1.19
LYSMD4-203ENST00000378904 SPG7Q9UQ90 795 aa22.46■■□□□ 1.19
LYSMD4-203ENST00000378904 OVOS2A0A0G2JMS6 1433 aa22.46■■□□□ 1.19
LYSMD4-203ENST00000378904 RNMTO43148 476 aaKnown RBP22.46■■□□□ 1.19
LYSMD4-203ENST00000378904 TRIM27P14373 513 aa22.46■■□□□ 1.19
LYSMD4-203ENST00000378904 ATF7IPQ6VMQ6 1270 aa22.46■■□□□ 1.19
LYSMD4-203ENST00000378904 STRN4Q9NRL3 753 aa22.46■■□□□ 1.19
LYSMD4-203ENST00000378904 KDM3BQ7LBC6 1761 aa22.45■■□□□ 1.19
LYSMD4-203ENST00000378904 MS4A1P11836 297 aa22.45■■□□□ 1.18
LYSMD4-203ENST00000378904 EVA1CP58658 441 aa22.45■■□□□ 1.18
LYSMD4-203ENST00000378904 DZIP1LQ8IYY4 767 aaKnown RBP22.45■■□□□ 1.18
LYSMD4-203ENST00000378904 TCERG1O14776 1098 aaKnown RBP22.45■■□□□ 1.18
LYSMD4-203ENST00000378904 IPO8O15397 1037 aaKnown RBP22.45■■□□□ 1.18
LYSMD4-203ENST00000378904 SCN11AQ9UI33 1791 aa22.44■■□□□ 1.18
LYSMD4-203ENST00000378904 TEFQ10587 303 aa22.44■■□□□ 1.18
LYSMD4-203ENST00000378904 FTSJ3Q8IY81 847 aaKnown RBP22.44■■□□□ 1.18
LYSMD4-203ENST00000378904 SIPA1L3O60292 1781 aaPredicted RBP22.44■■□□□ 1.18
LYSMD4-203ENST00000378904 LARP1Q6PKG0 1096 aaKnown RBP22.43■■□□□ 1.18
LYSMD4-203ENST00000378904 CARD10Q9BWT7 1032 aa22.43■■□□□ 1.18
LYSMD4-203ENST00000378904 BTG4Q9NY30 223 aa22.43■■□□□ 1.18
LYSMD4-203ENST00000378904 PHKG2P15735 406 aa22.42■■□□□ 1.18
LYSMD4-203ENST00000378904 MSH5O43196 834 aa22.41■■□□□ 1.18
LYSMD4-203ENST00000378904 IFNL2Q8IZJ0 200 aa22.41■■□□□ 1.18
LYSMD4-203ENST00000378904 MVPQ14764 893 aaKnown RBP22.4■■□□□ 1.18
LYSMD4-203ENST00000378904 ARHGAP45Q92619 1136 aa22.4■■□□□ 1.18
LYSMD4-203ENST00000378904 KDM6AO15550 1401 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms