RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 DDX54Q8TDD1 881 aaKnown RBP23.38■■□□□ 1.33
RER1-202ENST00000378512 PER1O15534 1290 aaPredicted RBP23.37■■□□□ 1.33
RER1-202ENST00000378512 SPON1Q9HCB6 807 aa23.37■■□□□ 1.33
RER1-202ENST00000378512 NCAPD2Q15021 1401 aa23.37■■□□□ 1.33
RER1-202ENST00000378512 SMG6Q86US8 1419 aaKnown RBP23.37■■□□□ 1.33
RER1-202ENST00000378512 WASHC2AQ641Q2 1341 aa23.37■■□□□ 1.33
RER1-202ENST00000378512 MEGF6O75095 1541 aa23.36■■□□□ 1.33
RER1-202ENST00000378512 POLKQ9UBT6 870 aa23.36■■□□□ 1.33
RER1-202ENST00000378512 ZBTB7AO95365 584 aa23.35■■□□□ 1.33
RER1-202ENST00000378512 NBPF6Q5VWK0 638 aa23.35■■□□□ 1.33
RER1-202ENST00000378512 USHBP1Q8N6Y0 703 aa23.35■■□□□ 1.33
RER1-202ENST00000378512 NBPF4Q96M43 638 aa23.35■■□□□ 1.33
RER1-202ENST00000378512 AMER1Q5JTC6 1135 aaPredicted RBP23.34■■□□□ 1.33
RER1-202ENST00000378512 PAPPAQ13219 1627 aa23.33■■□□□ 1.33
RER1-202ENST00000378512 SLC15A2Q16348 729 aa23.33■■□□□ 1.32
RER1-202ENST00000378512 STK32BQ9NY57 414 aa23.33■■□□□ 1.32
RER1-202ENST00000378512 KNSTRNQ9Y448 316 aa23.33■■□□□ 1.32
RER1-202ENST00000378512 PPP1R1BQ9UD71 204 aaPredicted RBP23.32■■□□□ 1.32
RER1-202ENST00000378512 LRRC4BQ9NT99 713 aa23.31■■□□□ 1.32
RER1-202ENST00000378512 DOT1LQ8TEK3 1739 aa23.31■■□□□ 1.32
RER1-202ENST00000378512 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
RER1-202ENST00000378512 ATF5Q9Y2D1 282 aaPredicted RBP23.3■■□□□ 1.32
RER1-202ENST00000378512 PKD1L3Q7Z443 1732 aa23.29■■□□□ 1.32
RER1-202ENST00000378512 PTGER2P43116 358 aa23.28■■□□□ 1.32
RER1-202ENST00000378512 ZNF827Q17R98 1081 aa23.28■■□□□ 1.32
RER1-202ENST00000378512 NPC1L1Q9UHC9 1359 aa23.28■■□□□ 1.32
RER1-202ENST00000378512 PRIM1P49642 420 aaKnown RBP23.27■■□□□ 1.32
RER1-202ENST00000378512 KCNQ4P56696 695 aa23.27■■□□□ 1.32
RER1-202ENST00000378512 ZCRB1Q8TBF4 217 aaKnown RBP23.27■■□□□ 1.32
RER1-202ENST00000378512 SYTL4Q96C24 671 aaPredicted RBP23.26■■□□□ 1.31
RER1-202ENST00000378512 MORC1Q86VD1 984 aa23.25■■□□□ 1.31
RER1-202ENST00000378512 PPM1GO15355 546 aaPredicted RBP23.25■■□□□ 1.31
RER1-202ENST00000378512 TNNT2P45379 298 aaPredicted RBP23.25■■□□□ 1.31
RER1-202ENST00000378512 PLEKHG2Q9H7P9 1386 aa23.22■■□□□ 1.31
RER1-202ENST00000378512 EIF4A2Q14240 407 aaKnown RBP23.22■■□□□ 1.31
RER1-202ENST00000378512 EYA1Q99502 592 aa23.22■■□□□ 1.31
RER1-202ENST00000378512 RAPGEF4Q8WZA2 1011 aa23.21■■□□□ 1.31
RER1-202ENST00000378512 AKT1S1Q96B36 256 aa23.2■■□□□ 1.3
RER1-202ENST00000378512 SGIP1Q9BQI5 828 aa23.2■■□□□ 1.3
RER1-202ENST00000378512 TATP17735 454 aaPredicted RBP23.19■■□□□ 1.3
RER1-202ENST00000378512 MTFR1LQ9H019 292 aa23.19■■□□□ 1.3
RER1-202ENST00000378512 LY75O60449 1722 aa23.19■■□□□ 1.3
RER1-202ENST00000378512 IGSF1Q8N6C5 1336 aa23.19■■□□□ 1.3
RER1-202ENST00000378512 TUBGCP6Q96RT7 1819 aa23.18■■□□□ 1.3
RER1-202ENST00000378512 SLC27A3Q5K4L6 730 aa23.16■■□□□ 1.3
RER1-202ENST00000378512 PCDH11XQ9BZA7 1347 aa23.15■■□□□ 1.3
RER1-202ENST00000378512 PCDH11YQ9BZA8 1340 aa23.15■■□□□ 1.3
RER1-202ENST00000378512 CYP27B1O15528 508 aa23.15■■□□□ 1.3
RER1-202ENST00000378512 FHDC1Q9C0D6 1143 aaPredicted RBP23.15■■□□□ 1.3
RER1-202ENST00000378512 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.15■■□□□ 1.3
RER1-202ENST00000378512 TOGARAM1Q9Y4F4 1720 aa23.15■■□□□ 1.3
RER1-202ENST00000378512 PNPLA7Q6ZV29 1317 aa23.14■■□□□ 1.3
RER1-202ENST00000378512 CC2D1BQ5T0F9 858 aaKnown RBP23.13■■□□□ 1.29
RER1-202ENST00000378512 ITGB4P16144 1822 aa23.13■■□□□ 1.29
RER1-202ENST00000378512 QSER1Q2KHR3 1735 aa23.12■■□□□ 1.29
RER1-202ENST00000378512 KDRP35968 1356 aa23.11■■□□□ 1.29
RER1-202ENST00000378512 IL13P35225 146 aa23.11■■□□□ 1.29
RER1-202ENST00000378512 MTHFSP49914 203 aa23.11■■□□□ 1.29
RER1-202ENST00000378512 SYT17Q9BSW7 474 aa23.11■■□□□ 1.29
RER1-202ENST00000378512 CCNL1Q9UK58 526 aaPredicted RBP23.11■■□□□ 1.29
RER1-202ENST00000378512 COL3A1P02461 1466 aaPredicted RBP23.09■■□□□ 1.29
RER1-202ENST00000378512 YY1P25490 414 aa23.09■■□□□ 1.29
RER1-202ENST00000378512 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
RER1-202ENST00000378512 TFCP2L1Q9NZI6 479 aa23.09■■□□□ 1.29
RER1-202ENST00000378512 ARXQ96QS3 562 aa23.08■■□□□ 1.29
RER1-202ENST00000378512 MPRIPQ6WCQ1 1025 aa23.08■■□□□ 1.28
RER1-202ENST00000378512 SPG7Q9UQ90 795 aa23.08■■□□□ 1.28
RER1-202ENST00000378512 UTRNP46939 3433 aa23.06■■□□□ 1.28
RER1-202ENST00000378512 PALLDQ8WX93 1383 aa23.05■■□□□ 1.28
RER1-202ENST00000378512 C5P01031 1676 aa23.05■■□□□ 1.28
RER1-202ENST00000378512 COL24A1Q17RW2 1714 aa23.05■■□□□ 1.28
RER1-202ENST00000378512 AEBP1Q8IUX7 1158 aa23.03■■□□□ 1.28
RER1-202ENST00000378512 DCAF8L1A6NGE4 600 aa23.02■■□□□ 1.28
RER1-202ENST00000378512 PHKG2P15735 406 aa23.02■■□□□ 1.28
RER1-202ENST00000378512 COL23A1Q86Y22 540 aaPredicted RBP23.02■■□□□ 1.28
RER1-202ENST00000378512 PIGBQ92521 554 aa23.02■■□□□ 1.28
RER1-202ENST00000378512 IFNL2Q8IZJ0 200 aa23.01■■□□□ 1.27
RER1-202ENST00000378512 SLC16A10Q8TF71 515 aa23.01■■□□□ 1.27
RER1-202ENST00000378512 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
RER1-202ENST00000378512 SULT6B1Q6IMI4 303 aa23■■□□□ 1.27
RER1-202ENST00000378512 SMIM5Q71RC9 77 aa23■■□□□ 1.27
RER1-202ENST00000378512 KLHL34Q8N239 644 aa23■■□□□ 1.27
RER1-202ENST00000378512 MSH5O43196 834 aa22.99■■□□□ 1.27
RER1-202ENST00000378512 AMIGO3Q86WK7 504 aa22.99■■□□□ 1.27
RER1-202ENST00000378512 MAP3K5Q99683 1374 aa22.99■■□□□ 1.27
RER1-202ENST00000378512 DIAPH1O60610 1272 aaKnown RBP22.99■■□□□ 1.27
RER1-202ENST00000378512 AMOTQ4VCS5 1084 aa22.99■■□□□ 1.27
RER1-202ENST00000378512 MSL1Q68DK7 614 aa22.99■■□□□ 1.27
RER1-202ENST00000378512 PLEKHO1Q53GL0 409 aaPredicted RBP22.98■■□□□ 1.27
RER1-202ENST00000378512 VIRMAQ69YN4 1812 aaKnown RBP22.97■■□□□ 1.27
RER1-202ENST00000378512 SCN11AQ9UI33 1791 aa22.96■■□□□ 1.27
RER1-202ENST00000378512 C4BP0C0L5 1744 aa22.96■■□□□ 1.27
RER1-202ENST00000378512 POLD1P28340 1107 aa22.96■■□□□ 1.27
RER1-202ENST00000378512 NLGN2Q8NFZ4 835 aa22.96■■□□□ 1.27
RER1-202ENST00000378512 PPP2R1AP30153 589 aa22.95■■□□□ 1.26
RER1-202ENST00000378512 ZEB1P37275 1124 aaPredicted RBP22.95■■□□□ 1.26
RER1-202ENST00000378512 ASAP1Q9ULH1 1129 aa22.95■■□□□ 1.26
RER1-202ENST00000378512 ADAMTS7Q9UKP4 1686 aa22.95■■□□□ 1.26
RER1-202ENST00000378512 KDM6AO15550 1401 aaPredicted RBP22.94■■□□□ 1.26
RER1-202ENST00000378512 CNGB1Q14028 1251 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms