RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 NGEFQ8N5V2 710 aa20.77■□□□□ 0.92
CCDC107-204ENST00000378409 AFF2P51816 1311 aa20.77■□□□□ 0.91
CCDC107-204ENST00000378409 RIPK4P57078 832 aa20.76■□□□□ 0.91
CCDC107-204ENST00000378409 USP21Q9UK80 565 aa20.76■□□□□ 0.91
CCDC107-204ENST00000378409 MTHFSDQ2M296 383 aaKnown RBP20.75■□□□□ 0.91
CCDC107-204ENST00000378409 PLEKHO1Q53GL0 409 aaPredicted RBP20.75■□□□□ 0.91
CCDC107-204ENST00000378409 GAS2L2Q8NHY3 880 aa20.75■□□□□ 0.91
CCDC107-204ENST00000378409 CCDC9Q9Y3X0 531 aaKnown RBP20.75■□□□□ 0.91
CCDC107-204ENST00000378409 SHANK3Q9BYB0 1731 aa20.74■□□□□ 0.91
CCDC107-204ENST00000378409 SPATA31A1Q5TZJ5 1347 aa20.74■□□□□ 0.91
CCDC107-204ENST00000378409 OVOS2A0A0G2JMS6 1433 aa20.73■□□□□ 0.91
CCDC107-204ENST00000378409 IL2RBP14784 551 aa20.73■□□□□ 0.91
CCDC107-204ENST00000378409 AMOTQ4VCS5 1084 aa20.73■□□□□ 0.91
CCDC107-204ENST00000378409 SPATA31A5Q5VU36 1347 aa20.73■□□□□ 0.91
CCDC107-204ENST00000378409 SPATA31A7Q8IWB4 1347 aa20.73■□□□□ 0.91
CCDC107-204ENST00000378409 PLEKHG2Q9H7P9 1386 aa20.72■□□□□ 0.91
CCDC107-204ENST00000378409 VPS72Q15906 364 aa20.72■□□□□ 0.91
CCDC107-204ENST00000378409 NCBP3Q53F19 620 aaKnown RBP20.72■□□□□ 0.91
CCDC107-204ENST00000378409 CCDC27Q2M243 656 aa20.71■□□□□ 0.91
CCDC107-204ENST00000378409 ZNF530Q6P9A1 599 aaPredicted RBP20.71■□□□□ 0.91
CCDC107-204ENST00000378409 POTEAQ6S8J7 498 aa20.71■□□□□ 0.91
CCDC107-204ENST00000378409 WWC1Q8IX03 1113 aa20.71■□□□□ 0.91
CCDC107-204ENST00000378409 TRIM35Q9UPQ4 493 aa20.71■□□□□ 0.91
CCDC107-204ENST00000378409 LMOD3Q0VAK6 560 aa20.7■□□□□ 0.9
CCDC107-204ENST00000378409 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
CCDC107-204ENST00000378409 ZNF521Q96K83 1311 aa20.7■□□□□ 0.9
CCDC107-204ENST00000378409 DISP2A7MBM2 1401 aa20.7■□□□□ 0.9
CCDC107-204ENST00000378409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.69■□□□□ 0.9
CCDC107-204ENST00000378409 THRAP3Q9Y2W1 955 aaKnown RBP20.69■□□□□ 0.9
CCDC107-204ENST00000378409 MAP3K5Q99683 1374 aa20.69■□□□□ 0.9
CCDC107-204ENST00000378409 LRRC37A3O60309 1634 aa20.67■□□□□ 0.9
CCDC107-204ENST00000378409 SCN11AQ9UI33 1791 aa20.67■□□□□ 0.9
CCDC107-204ENST00000378409 GNAT3A8MTJ3 354 aa20.67■□□□□ 0.9
CCDC107-204ENST00000378409 C1orf141Q5JVX7 400 aa20.67■□□□□ 0.9
CCDC107-204ENST00000378409 RTF1Q92541 710 aaKnown RBP20.67■□□□□ 0.9
CCDC107-204ENST00000378409 ATRNO75882 1429 aa20.67■□□□□ 0.9
CCDC107-204ENST00000378409 GLI3P10071 1580 aa20.67■□□□□ 0.9
CCDC107-204ENST00000378409 ZCRB1Q8TBF4 217 aaKnown RBP20.66■□□□□ 0.9
CCDC107-204ENST00000378409 GOLGA2Q08379 1002 aa20.65■□□□□ 0.9
CCDC107-204ENST00000378409 PDE3BQ13370 1112 aa20.65■□□□□ 0.9
CCDC107-204ENST00000378409 DCTN1Q14203 1278 aa20.65■□□□□ 0.9
CCDC107-204ENST00000378409 AKAP4Q5JQC9 854 aa20.65■□□□□ 0.9
CCDC107-204ENST00000378409 BARGINQ6ZT62 677 aa20.65■□□□□ 0.9
CCDC107-204ENST00000378409 WDR63Q8IWG1 891 aa20.65■□□□□ 0.9
CCDC107-204ENST00000378409 THUMPD2Q9BTF0 503 aaKnown RBP20.65■□□□□ 0.9
CCDC107-204ENST00000378409 CDCA7Q9BWT1 371 aaPredicted RBP20.65■□□□□ 0.9
CCDC107-204ENST00000378409 TRPC5Q9UL62 973 aaPredicted RBP20.65■□□□□ 0.9
CCDC107-204ENST00000378409 PCDH11XQ9BZA7 1347 aa20.64■□□□□ 0.89
CCDC107-204ENST00000378409 PCDH11YQ9BZA8 1340 aa20.64■□□□□ 0.89
CCDC107-204ENST00000378409 HTATSF1O43719 755 aaKnown RBP20.64■□□□□ 0.89
CCDC107-204ENST00000378409 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.89
CCDC107-204ENST00000378409 MCM10Q7L590 875 aa20.64■□□□□ 0.89
CCDC107-204ENST00000378409 ADAMTS7Q9UKP4 1686 aa20.64■□□□□ 0.89
CCDC107-204ENST00000378409 FAM98CQ17RN3 349 aaKnown RBP20.63■□□□□ 0.89
CCDC107-204ENST00000378409 CDCA7LQ96GN5 454 aa20.63■□□□□ 0.89
CCDC107-204ENST00000378409 THSD7AQ9UPZ6 1657 aa20.63■□□□□ 0.89
CCDC107-204ENST00000378409 TNS2Q63HR2 1409 aa20.62■□□□□ 0.89
CCDC107-204ENST00000378409 CYP27B1O15528 508 aa20.62■□□□□ 0.89
CCDC107-204ENST00000378409 PHKG2P15735 406 aa20.62■□□□□ 0.89
CCDC107-204ENST00000378409 CALD1Q05682 793 aaKnown RBP20.62■□□□□ 0.89
CCDC107-204ENST00000378409 IFNL2Q8IZJ0 200 aa20.62■□□□□ 0.89
CCDC107-204ENST00000378409 GJD4Q96KN9 370 aaPredicted RBP20.62■□□□□ 0.89
CCDC107-204ENST00000378409 QTRT2Q9H974 415 aaKnown RBP20.62■□□□□ 0.89
CCDC107-204ENST00000378409 MPRIPQ6WCQ1 1025 aa20.61■□□□□ 0.89
CCDC107-204ENST00000378409 SIPA1L3O60292 1781 aaPredicted RBP20.61■□□□□ 0.89
CCDC107-204ENST00000378409 KAT6BQ8WYB5 2073 aa20.6■□□□□ 0.89
CCDC107-204ENST00000378409 EXOC5O00471 708 aa20.6■□□□□ 0.89
CCDC107-204ENST00000378409 ZNF772Q68DY9 489 aaPredicted RBP20.6■□□□□ 0.89
CCDC107-204ENST00000378409 DDX54Q8TDD1 881 aaKnown RBP20.6■□□□□ 0.89
CCDC107-204ENST00000378409 SPINK5Q9NQ38 1064 aaPredicted RBP20.6■□□□□ 0.89
CCDC107-204ENST00000378409 IL16Q14005 1332 aa20.59■□□□□ 0.89
CCDC107-204ENST00000378409 A0A0G2JS52 829 aa20.59■□□□□ 0.89
CCDC107-204ENST00000378409 E9PSI1 815 aa20.59■□□□□ 0.89
CCDC107-204ENST00000378409 MYT1Q01538 1121 aa20.59■□□□□ 0.89
CCDC107-204ENST00000378409 DDB1Q16531 1140 aa20.59■□□□□ 0.89
CCDC107-204ENST00000378409 IL17REQ8NFR9 667 aa20.59■□□□□ 0.89
CCDC107-204ENST00000378409 SLFN5Q08AF3 891 aa20.58■□□□□ 0.89
CCDC107-204ENST00000378409 LGR6Q9HBX8 967 aa20.58■□□□□ 0.89
CCDC107-204ENST00000378409 LAS1LQ9Y4W2 734 aaKnown RBP20.58■□□□□ 0.89
CCDC107-204ENST00000378409 KDM6AO15550 1401 aaPredicted RBP20.58■□□□□ 0.88
CCDC107-204ENST00000378409 TOGARAM1Q9Y4F4 1720 aa20.58■□□□□ 0.88
CCDC107-204ENST00000378409 RNMTO43148 476 aaKnown RBP20.57■□□□□ 0.88
CCDC107-204ENST00000378409 HSP90AB1P08238 724 aaKnown RBP20.57■□□□□ 0.88
CCDC107-204ENST00000378409 CEMIPQ8WUJ3 1361 aa20.57■□□□□ 0.88
CCDC107-204ENST00000378409 ITGB4P16144 1822 aa20.56■□□□□ 0.88
CCDC107-204ENST00000378409 DCAF5Q96JK2 942 aa20.56■□□□□ 0.88
CCDC107-204ENST00000378409 GNAI1P63096 354 aa20.55■□□□□ 0.88
CCDC107-204ENST00000378409 MYH16Q9H6N6 1097 aa20.55■□□□□ 0.88
CCDC107-204ENST00000378409 IFT57Q9NWB7 429 aa20.55■□□□□ 0.88
CCDC107-204ENST00000378409 DOT1LQ8TEK3 1739 aa20.55■□□□□ 0.88
CCDC107-204ENST00000378409 BRWD3Q6RI45 1802 aa20.55■□□□□ 0.88
CCDC107-204ENST00000378409 KDM3BQ7LBC6 1761 aa20.54■□□□□ 0.88
CCDC107-204ENST00000378409 TEFQ10587 303 aa20.54■□□□□ 0.88
CCDC107-204ENST00000378409 DUSP27Q5VZP5 1158 aa20.54■□□□□ 0.88
CCDC107-204ENST00000378409 NKX1-1Q15270 411 aaPredicted RBP20.53■□□□□ 0.88
CCDC107-204ENST00000378409 TRMT2AQ8IZ69 625 aaKnown RBP20.53■□□□□ 0.88
CCDC107-204ENST00000378409 TSR2Q969E8 191 aaKnown RBP20.53■□□□□ 0.88
CCDC107-204ENST00000378409 CFAP44Q96MT7 982 aa20.53■□□□□ 0.88
CCDC107-204ENST00000378409 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
CCDC107-204ENST00000378409 MRC1P22897 1456 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms