RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 PRIM1P49642 420 aaKnown RBP27.61■■■□□ 2.01
CCDC107-202ENST00000378406 KCNQ4P56696 695 aa27.61■■■□□ 2.01
CCDC107-202ENST00000378406 SYTL4Q96C24 671 aaPredicted RBP27.61■■■□□ 2.01
CCDC107-202ENST00000378406 TUBGCP6Q96RT7 1819 aa27.61■■■□□ 2.01
CCDC107-202ENST00000378406 NSD2O96028 1365 aa27.6■■■□□ 2.01
CCDC107-202ENST00000378406 LY75O60449 1722 aa27.6■■■□□ 2.01
CCDC107-202ENST00000378406 MEGF6O75095 1541 aa27.59■■■□□ 2.01
CCDC107-202ENST00000378406 ST20-MTHFSA0A0A6YYL1 179 aa27.59■■■□□ 2.01
CCDC107-202ENST00000378406 AMPHP49418 695 aa27.59■■■□□ 2.01
CCDC107-202ENST00000378406 ZCRB1Q8TBF4 217 aaKnown RBP27.57■■■□□ 2
CCDC107-202ENST00000378406 TFCP2L1Q9NZI6 479 aa27.56■■■□□ 2
CCDC107-202ENST00000378406 POLD1P28340 1107 aa27.55■■■□□ 2
CCDC107-202ENST00000378406 RTL1A6NKG5 1358 aa27.54■■■□□ 2
CCDC107-202ENST00000378406 GPR162Q16538 588 aa27.54■■■□□ 2
CCDC107-202ENST00000378406 KLHL34Q8N239 644 aa27.54■■■□□ 2
CCDC107-202ENST00000378406 SLC24A1O60721 1099 aa27.52■■■□□ 2
CCDC107-202ENST00000378406 NBPF6Q5VWK0 638 aa27.52■■■□□ 2
CCDC107-202ENST00000378406 NBPF4Q96M43 638 aa27.52■■■□□ 2
CCDC107-202ENST00000378406 RRS1Q15050 365 aaKnown RBP27.51■■□□□ 1.99
CCDC107-202ENST00000378406 CCNL1Q9UK58 526 aaPredicted RBP27.5■■□□□ 1.99
CCDC107-202ENST00000378406 FYB1O15117 783 aa27.49■■□□□ 1.99
CCDC107-202ENST00000378406 USHBP1Q8N6Y0 703 aa27.48■■□□□ 1.99
CCDC107-202ENST00000378406 NLGN2Q8NFZ4 835 aa27.48■■□□□ 1.99
CCDC107-202ENST00000378406 CGNL1Q0VF96 1302 aa27.47■■□□□ 1.99
CCDC107-202ENST00000378406 C1QTNF8P60827 252 aa27.47■■□□□ 1.99
CCDC107-202ENST00000378406 GGNBP2Q9H3C7 697 aa27.47■■□□□ 1.99
CCDC107-202ENST00000378406 USP47Q96K76 1375 aa27.47■■□□□ 1.99
CCDC107-202ENST00000378406 PELP1Q8IZL8 1130 aaKnown RBP27.45■■□□□ 1.98
CCDC107-202ENST00000378406 GOLGB1Q14789 3259 aaKnown RBP27.45■■□□□ 1.98
CCDC107-202ENST00000378406 COL23A1Q86Y22 540 aaPredicted RBP27.44■■□□□ 1.98
CCDC107-202ENST00000378406 RAPGEF4Q8WZA2 1011 aa27.44■■□□□ 1.98
CCDC107-202ENST00000378406 SMG6Q86US8 1419 aaKnown RBP27.43■■□□□ 1.98
CCDC107-202ENST00000378406 SENP3-EIF4A1A0A087X0R7 540 aa27.42■■□□□ 1.98
CCDC107-202ENST00000378406 INSRP06213 1382 aa27.41■■□□□ 1.98
CCDC107-202ENST00000378406 MSH5O43196 834 aa27.41■■□□□ 1.98
CCDC107-202ENST00000378406 TATP17735 454 aaPredicted RBP27.41■■□□□ 1.98
CCDC107-202ENST00000378406 TMF1P82094 1093 aa27.41■■□□□ 1.98
CCDC107-202ENST00000378406 HSP90AB2PQ58FF8 381 aa27.41■■□□□ 1.98
CCDC107-202ENST00000378406 C5P01031 1676 aa27.4■■□□□ 1.98
CCDC107-202ENST00000378406 KIF20BQ96Q89 1820 aa27.39■■□□□ 1.97
CCDC107-202ENST00000378406 PCDH11XQ9BZA7 1347 aa27.39■■□□□ 1.97
CCDC107-202ENST00000378406 PCDH11YQ9BZA8 1340 aa27.39■■□□□ 1.97
CCDC107-202ENST00000378406 YBX3P16989 372 aaKnown RBP eCLIP27.38■■□□□ 1.97
CCDC107-202ENST00000378406 FLT4P35916 1363 aa27.37■■□□□ 1.97
CCDC107-202ENST00000378406 MSL1Q68DK7 614 aa27.37■■□□□ 1.97
CCDC107-202ENST00000378406 TAF1LQ8IZX4 1826 aa27.37■■□□□ 1.97
CCDC107-202ENST00000378406 KIF24Q5T7B8 1368 aa27.36■■□□□ 1.97
CCDC107-202ENST00000378406 PALLDQ8WX93 1383 aa27.35■■□□□ 1.97
CCDC107-202ENST00000378406 TOGARAM1Q9Y4F4 1720 aa27.34■■□□□ 1.97
CCDC107-202ENST00000378406 CYP27B1O15528 508 aa27.34■■□□□ 1.97
CCDC107-202ENST00000378406 GIGYF1O75420 1035 aaPredicted RBP27.34■■□□□ 1.97
CCDC107-202ENST00000378406 GRIN3BO60391 1043 aa27.33■■□□□ 1.97
CCDC107-202ENST00000378406 MPRIPQ6WCQ1 1025 aa27.33■■□□□ 1.97
CCDC107-202ENST00000378406 ITGB4P16144 1822 aa27.32■■□□□ 1.96
CCDC107-202ENST00000378406 PKD1L3Q7Z443 1732 aa27.31■■□□□ 1.96
CCDC107-202ENST00000378406 FLAD1Q8NFF5 587 aa27.31■■□□□ 1.96
CCDC107-202ENST00000378406 CARD14Q9BXL6 1004 aa27.3■■□□□ 1.96
CCDC107-202ENST00000378406 C4BP0C0L5 1744 aa27.3■■□□□ 1.96
CCDC107-202ENST00000378406 HMGB2P26583 209 aaKnown RBP27.29■■□□□ 1.96
CCDC107-202ENST00000378406 CDCA8Q53HL2 280 aa27.29■■□□□ 1.96
CCDC107-202ENST00000378406 EMILIN1Q9Y6C2 1016 aa27.29■■□□□ 1.96
CCDC107-202ENST00000378406 NCAPD2Q15021 1401 aa27.28■■□□□ 1.96
CCDC107-202ENST00000378406 CD2APQ9Y5K6 639 aa27.28■■□□□ 1.96
CCDC107-202ENST00000378406 AMIGO3Q86WK7 504 aa27.27■■□□□ 1.96
CCDC107-202ENST00000378406 SMARCC1Q92922 1105 aaPredicted RBP27.27■■□□□ 1.96
CCDC107-202ENST00000378406 NSD3Q9BZ95 1437 aa27.26■■□□□ 1.95
CCDC107-202ENST00000378406 PIGBQ92521 554 aa27.25■■□□□ 1.95
CCDC107-202ENST00000378406 ANKRD26Q9UPS8 1709 aa27.24■■□□□ 1.95
CCDC107-202ENST00000378406 UBR3Q6ZT12 1888 aa27.24■■□□□ 1.95
CCDC107-202ENST00000378406 NKX1-1Q15270 411 aaPredicted RBP27.24■■□□□ 1.95
CCDC107-202ENST00000378406 AK7Q96M32 723 aa27.24■■□□□ 1.95
CCDC107-202ENST00000378406 MAP2P11137 1827 aaKnown RBP27.23■■□□□ 1.95
CCDC107-202ENST00000378406 SMIM5Q71RC9 77 aa27.21■■□□□ 1.95
CCDC107-202ENST00000378406 PPM1GO15355 546 aaPredicted RBP27.2■■□□□ 1.94
CCDC107-202ENST00000378406 ATP10DQ9P241 1426 aa27.2■■□□□ 1.94
CCDC107-202ENST00000378406 SPG7Q9UQ90 795 aa27.2■■□□□ 1.94
CCDC107-202ENST00000378406 WASHC2AQ641Q2 1341 aa27.19■■□□□ 1.94
CCDC107-202ENST00000378406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.19■■□□□ 1.94
CCDC107-202ENST00000378406 PHF14O94880 888 aa27.19■■□□□ 1.94
CCDC107-202ENST00000378406 LOC102724428A0A0B4J2F2 783 aa27.17■■□□□ 1.94
CCDC107-202ENST00000378406 SIK1P57059 783 aa27.17■■□□□ 1.94
CCDC107-202ENST00000378406 LINC00116Q8NCU8 138 aa27.17■■□□□ 1.94
CCDC107-202ENST00000378406 EYA1Q99502 592 aa27.17■■□□□ 1.94
CCDC107-202ENST00000378406 SSFA2P28290 1259 aa27.16■■□□□ 1.94
CCDC107-202ENST00000378406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.16■■□□□ 1.94
CCDC107-202ENST00000378406 ADCY9O60503 1353 aa27.15■■□□□ 1.94
CCDC107-202ENST00000378406 TMOD3Q9NYL9 352 aa27.14■■□□□ 1.94
CCDC107-202ENST00000378406 ASAP1Q9ULH1 1129 aa27.14■■□□□ 1.94
CCDC107-202ENST00000378406 CEP350Q5VT06 3117 aa27.14■■□□□ 1.93
CCDC107-202ENST00000378406 IGSF1Q8N6C5 1336 aa27.14■■□□□ 1.93
CCDC107-202ENST00000378406 ITPK1Q13572 414 aa27.13■■□□□ 1.93
CCDC107-202ENST00000378406 POLKQ9UBT6 870 aa27.12■■□□□ 1.93
CCDC107-202ENST00000378406 PHKG2P15735 406 aa27.11■■□□□ 1.93
CCDC107-202ENST00000378406 CCER1Q8TC90 406 aaPredicted RBP27.11■■□□□ 1.93
CCDC107-202ENST00000378406 IFNL2Q8IZJ0 200 aa27.1■■□□□ 1.93
CCDC107-202ENST00000378406 GPBP1L1Q9HC44 474 aaPredicted RBP27.1■■□□□ 1.93
CCDC107-202ENST00000378406 WWC3Q9ULE0 1092 aa27.1■■□□□ 1.93
CCDC107-202ENST00000378406 GNPATO15228 680 aa27.09■■□□□ 1.93
CCDC107-202ENST00000378406 ATP6V1AP38606 617 aa27.09■■□□□ 1.93
CCDC107-202ENST00000378406 ATG3Q9NT62 314 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms