RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 GAS2L2Q8NHY3 880 aa18.45■□□□□ 0.54
TPM2-204ENST00000378300 RAPGEF4Q8WZA2 1011 aa18.45■□□□□ 0.54
TPM2-204ENST00000378300 CRB1P82279 1406 aa18.45■□□□□ 0.54
TPM2-204ENST00000378300 SLIT2O94813 1529 aa18.44■□□□□ 0.54
TPM2-204ENST00000378300 NRAPQ86VF7 1730 aa18.44■□□□□ 0.54
TPM2-204ENST00000378300 MCM10Q7L590 875 aa18.43■□□□□ 0.54
TPM2-204ENST00000378300 DUSP27Q5VZP5 1158 aa18.42■□□□□ 0.54
TPM2-204ENST00000378300 NGLY1Q96IV0 654 aa18.42■□□□□ 0.54
TPM2-204ENST00000378300 TATP17735 454 aaPredicted RBP18.42■□□□□ 0.54
TPM2-204ENST00000378300 PLEKHO1Q53GL0 409 aaPredicted RBP18.42■□□□□ 0.54
TPM2-204ENST00000378300 TRMT2AQ8IZ69 625 aaKnown RBP18.42■□□□□ 0.54
TPM2-204ENST00000378300 LMOD3Q0VAK6 560 aa18.4■□□□□ 0.54
TPM2-204ENST00000378300 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
TPM2-204ENST00000378300 ZNF530Q6P9A1 599 aaPredicted RBP18.4■□□□□ 0.54
TPM2-204ENST00000378300 NWD2Q9ULI1 1742 aa18.4■□□□□ 0.54
TPM2-204ENST00000378300 MAP3K5Q99683 1374 aa18.4■□□□□ 0.54
TPM2-204ENST00000378300 GNAT3A8MTJ3 354 aa18.4■□□□□ 0.54
TPM2-204ENST00000378300 E9PSI1 815 aa18.4■□□□□ 0.54
TPM2-204ENST00000378300 BCL9LQ86UU0 1499 aa18.39■□□□□ 0.53
TPM2-204ENST00000378300 OVOS2A0A0G2JMS6 1433 aa18.39■□□□□ 0.53
TPM2-204ENST00000378300 IL2RBP14784 551 aa18.38■□□□□ 0.53
TPM2-204ENST00000378300 IL17REQ8NFR9 667 aa18.38■□□□□ 0.53
TPM2-204ENST00000378300 RTF1Q92541 710 aaKnown RBP18.38■□□□□ 0.53
TPM2-204ENST00000378300 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
TPM2-204ENST00000378300 MEX3CQ5U5Q3 659 aaKnown RBP18.37■□□□□ 0.53
TPM2-204ENST00000378300 FNBP4Q8N3X1 1017 aaPredicted RBP18.37■□□□□ 0.53
TPM2-204ENST00000378300 PKD1L3Q7Z443 1732 aa18.37■□□□□ 0.53
TPM2-204ENST00000378300 PARP4Q9UKK3 1724 aaKnown RBP18.37■□□□□ 0.53
TPM2-204ENST00000378300 UNC5CLQ8IV45 518 aa18.37■□□□□ 0.53
TPM2-204ENST00000378300 LAS1LQ9Y4W2 734 aaKnown RBP18.37■□□□□ 0.53
TPM2-204ENST00000378300 IL16Q14005 1332 aa18.37■□□□□ 0.53
TPM2-204ENST00000378300 SPATA31A1Q5TZJ5 1347 aa18.37■□□□□ 0.53
TPM2-204ENST00000378300 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
TPM2-204ENST00000378300 LGR6Q9HBX8 967 aa18.36■□□□□ 0.53
TPM2-204ENST00000378300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.36■□□□□ 0.532e-6■□□□□ 10.5
TPM2-204ENST00000378300 SPG7Q9UQ90 795 aa18.36■□□□□ 0.53
TPM2-204ENST00000378300 CYP27B1O15528 508 aa18.35■□□□□ 0.53
TPM2-204ENST00000378300 HTATSF1O43719 755 aaKnown RBP18.35■□□□□ 0.53
TPM2-204ENST00000378300 MPRIPQ6WCQ1 1025 aa18.35■□□□□ 0.53
TPM2-204ENST00000378300 SPATA31A5Q5VU36 1347 aa18.35■□□□□ 0.53
TPM2-204ENST00000378300 SPATA31A7Q8IWB4 1347 aa18.35■□□□□ 0.53
TPM2-204ENST00000378300 FANCIQ9NVI1 1328 aa18.35■□□□□ 0.53
TPM2-204ENST00000378300 C1orf141Q5JVX7 400 aa18.35■□□□□ 0.53
TPM2-204ENST00000378300 USP21Q9UK80 565 aa18.35■□□□□ 0.53
TPM2-204ENST00000378300 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
TPM2-204ENST00000378300 DISP2A7MBM2 1401 aa18.34■□□□□ 0.53
TPM2-204ENST00000378300 ZNF853P0CG23 659 aa18.34■□□□□ 0.53
TPM2-204ENST00000378300 FBXO41Q8TF61 875 aa18.34■□□□□ 0.53
TPM2-204ENST00000378300 MYH16Q9H6N6 1097 aa18.34■□□□□ 0.53
TPM2-204ENST00000378300 PHKG2P15735 406 aa18.33■□□□□ 0.53
TPM2-204ENST00000378300 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.53
TPM2-204ENST00000378300 ZCRB1Q8TBF4 217 aaKnown RBP18.33■□□□□ 0.53
TPM2-204ENST00000378300 LRRC37A3O60309 1634 aa18.33■□□□□ 0.52
TPM2-204ENST00000378300 CFAP44Q96MT7 982 aa18.32■□□□□ 0.52
TPM2-204ENST00000378300 MBIPQ9NS73 344 aa18.32■□□□□ 0.52
TPM2-204ENST00000378300 IFT57Q9NWB7 429 aa18.32■□□□□ 0.52
TPM2-204ENST00000378300 MIS18AQ9NYP9 233 aa18.32■□□□□ 0.52
TPM2-204ENST00000378300 AFF2P51816 1311 aa18.32■□□□□ 0.52
TPM2-204ENST00000378300 CEMIPQ8WUJ3 1361 aa18.32■□□□□ 0.52
TPM2-204ENST00000378300 PLEKHG2Q9H7P9 1386 aa18.32■□□□□ 0.52
TPM2-204ENST00000378300 SHANK3Q9BYB0 1731 aa18.32■□□□□ 0.52
TPM2-204ENST00000378300 WNK3Q9BYP7 1800 aa18.32■□□□□ 0.52
TPM2-204ENST00000378300 VIRMAQ69YN4 1812 aaKnown RBP18.31■□□□□ 0.52
TPM2-204ENST00000378300 GNAI1P63096 354 aa18.31■□□□□ 0.52
TPM2-204ENST00000378300 VPS72Q15906 364 aa18.31■□□□□ 0.52
TPM2-204ENST00000378300 IFNL2Q8IZJ0 200 aa18.31■□□□□ 0.52
TPM2-204ENST00000378300 KDM6AO15550 1401 aaPredicted RBP18.3■□□□□ 0.52
TPM2-204ENST00000378300 RNMTO43148 476 aaKnown RBP18.3■□□□□ 0.52
TPM2-204ENST00000378300 PCDH11XQ9BZA7 1347 aa18.3■□□□□ 0.52
TPM2-204ENST00000378300 PCDH11YQ9BZA8 1340 aa18.3■□□□□ 0.52
TPM2-204ENST00000378300 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.3■□□□□ 0.52
TPM2-204ENST00000378300 CHL1O00533 1208 aa18.3■□□□□ 0.52
TPM2-204ENST00000378300 EXOSC9Q06265 439 aaKnown RBP18.3■□□□□ 0.52
TPM2-204ENST00000378300 DDX54Q8TDD1 881 aaKnown RBP18.3■□□□□ 0.52
TPM2-204ENST00000378300 TSHZ2Q9NRE2 1034 aa18.29■□□□□ 0.52
TPM2-204ENST00000378300 RCAN3Q9UKA8 241 aa18.29■□□□□ 0.52
TPM2-204ENST00000378300 THRAP3Q9Y2W1 955 aaKnown RBP18.29■□□□□ 0.52
TPM2-204ENST00000378300 ADAMTS7Q9UKP4 1686 aa18.28■□□□□ 0.52
TPM2-204ENST00000378300 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.51
TPM2-204ENST00000378300 BARGINQ6ZT62 677 aa18.27■□□□□ 0.51
TPM2-204ENST00000378300 SCN11AQ9UI33 1791 aa18.27■□□□□ 0.51
TPM2-204ENST00000378300 TAF7Q15545 349 aaPredicted RBP18.26■□□□□ 0.51
TPM2-204ENST00000378300 DCAF5Q96JK2 942 aa18.26■□□□□ 0.51
TPM2-204ENST00000378300 EXOC5O00471 708 aa18.25■□□□□ 0.51
TPM2-204ENST00000378300 TEFQ10587 303 aa18.25■□□□□ 0.51
TPM2-204ENST00000378300 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
TPM2-204ENST00000378300 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
TPM2-204ENST00000378300 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
TPM2-204ENST00000378300 CDCA7Q9BWT1 371 aaPredicted RBP18.25■□□□□ 0.51
TPM2-204ENST00000378300 GLI3P10071 1580 aa18.24■□□□□ 0.51
TPM2-204ENST00000378300 TNS2Q63HR2 1409 aa18.24■□□□□ 0.51
TPM2-204ENST00000378300 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
TPM2-204ENST00000378300 C8orf58Q8NAV2 365 aa18.24■□□□□ 0.51
TPM2-204ENST00000378300 NKX1-1Q15270 411 aaPredicted RBP18.23■□□□□ 0.51
TPM2-204ENST00000378300 GJD4Q96KN9 370 aaPredicted RBP18.23■□□□□ 0.51
TPM2-204ENST00000378300 SIPA1L3O60292 1781 aaPredicted RBP18.23■□□□□ 0.51
TPM2-204ENST00000378300 ATRNO75882 1429 aa18.23■□□□□ 0.51
TPM2-204ENST00000378300 HSP90AB1P08238 724 aaKnown RBP18.22■□□□□ 0.51
TPM2-204ENST00000378300 DDB1Q16531 1140 aa18.22■□□□□ 0.51
TPM2-204ENST00000378300 NFATC2IPQ8NCF5 419 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms