RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
CBWD3-203ENST00000377344 VPS72Q15906 364 aa17■□□□□ 0.31
CBWD3-203ENST00000377344 SPATA31A5Q5VU36 1347 aa17■□□□□ 0.31
CBWD3-203ENST00000377344 SPATA31A7Q8IWB4 1347 aa17■□□□□ 0.31
CBWD3-203ENST00000377344 ZNF530Q6P9A1 599 aaPredicted RBP17■□□□□ 0.31
CBWD3-203ENST00000377344 WWC1Q8IX03 1113 aa16.99■□□□□ 0.31
CBWD3-203ENST00000377344 SPG7Q9UQ90 795 aa16.99■□□□□ 0.31
CBWD3-203ENST00000377344 PARP4Q9UKK3 1724 aaKnown RBP16.99■□□□□ 0.31
CBWD3-203ENST00000377344 LMOD3Q0VAK6 560 aa16.98■□□□□ 0.31
CBWD3-203ENST00000377344 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.98■□□□□ 0.31
CBWD3-203ENST00000377344 TRIM35Q9UPQ4 493 aa16.98■□□□□ 0.31
CBWD3-203ENST00000377344 THRAP3Q9Y2W1 955 aaKnown RBP16.98■□□□□ 0.31
CBWD3-203ENST00000377344 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
CBWD3-203ENST00000377344 OVOS2A0A0G2JMS6 1433 aa16.98■□□□□ 0.31
CBWD3-203ENST00000377344 CCDC27Q2M243 656 aa16.98■□□□□ 0.31
CBWD3-203ENST00000377344 C1orf141Q5JVX7 400 aa16.98■□□□□ 0.31
CBWD3-203ENST00000377344 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
CBWD3-203ENST00000377344 GNAT3A8MTJ3 354 aa16.97■□□□□ 0.31
CBWD3-203ENST00000377344 ZCRB1Q8TBF4 217 aaKnown RBP16.97■□□□□ 0.31
CBWD3-203ENST00000377344 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
CBWD3-203ENST00000377344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.96■□□□□ 0.31
CBWD3-203ENST00000377344 TRPC5Q9UL62 973 aaPredicted RBP16.96■□□□□ 0.31
CBWD3-203ENST00000377344 MAP3K5Q99683 1374 aa16.96■□□□□ 0.31
CBWD3-203ENST00000377344 DCTN1Q14203 1278 aa16.96■□□□□ 0.3
CBWD3-203ENST00000377344 FAM98CQ17RN3 349 aaKnown RBP16.96■□□□□ 0.3
CBWD3-203ENST00000377344 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
CBWD3-203ENST00000377344 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
CBWD3-203ENST00000377344 MCM10Q7L590 875 aa16.95■□□□□ 0.3
CBWD3-203ENST00000377344 THUMPD2Q9BTF0 503 aaKnown RBP16.95■□□□□ 0.3
CBWD3-203ENST00000377344 QTRT2Q9H974 415 aaKnown RBP16.95■□□□□ 0.3
CBWD3-203ENST00000377344 ZNF521Q96K83 1311 aa16.95■□□□□ 0.3
CBWD3-203ENST00000377344 PLEKHG2Q9H7P9 1386 aa16.95■□□□□ 0.3
CBWD3-203ENST00000377344 A0A0G2JS52 829 aa16.94■□□□□ 0.3
CBWD3-203ENST00000377344 MYT1Q01538 1121 aa16.94■□□□□ 0.3
CBWD3-203ENST00000377344 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
CBWD3-203ENST00000377344 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-203ENST00000377344 CDCA7Q9BWT1 371 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-203ENST00000377344 DISP2A7MBM2 1401 aa16.94■□□□□ 0.3
CBWD3-203ENST00000377344 PKD1L3Q7Z443 1732 aa16.94■□□□□ 0.3
CBWD3-203ENST00000377344 WNK3Q9BYP7 1800 aa16.94■□□□□ 0.3
CBWD3-203ENST00000377344 BARGINQ6ZT62 677 aa16.93■□□□□ 0.3
CBWD3-203ENST00000377344 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
CBWD3-203ENST00000377344 GJD4Q96KN9 370 aaPredicted RBP16.93■□□□□ 0.3
CBWD3-203ENST00000377344 PCDH11XQ9BZA7 1347 aa16.93■□□□□ 0.3
CBWD3-203ENST00000377344 PCDH11YQ9BZA8 1340 aa16.93■□□□□ 0.3
CBWD3-203ENST00000377344 EXOC5O00471 708 aa16.93■□□□□ 0.3
CBWD3-203ENST00000377344 CENPBP07199 599 aaPredicted RBP16.93■□□□□ 0.3
CBWD3-203ENST00000377344 WDR63Q8IWG1 891 aa16.93■□□□□ 0.3
CBWD3-203ENST00000377344 CDCA7LQ96GN5 454 aa16.93■□□□□ 0.3
CBWD3-203ENST00000377344 ATRNO75882 1429 aa16.93■□□□□ 0.3
CBWD3-203ENST00000377344 HTATSF1O43719 755 aaKnown RBP16.92■□□□□ 0.3
CBWD3-203ENST00000377344 PHKG2P15735 406 aa16.92■□□□□ 0.3
CBWD3-203ENST00000377344 PDE3BQ13370 1112 aa16.92■□□□□ 0.3
CBWD3-203ENST00000377344 ZNF772Q68DY9 489 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-203ENST00000377344 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
CBWD3-203ENST00000377344 CYP27B1O15528 508 aa16.91■□□□□ 0.3
CBWD3-203ENST00000377344 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
CBWD3-203ENST00000377344 DDB1Q16531 1140 aa16.91■□□□□ 0.3
CBWD3-203ENST00000377344 ILDR1Q86SU0 546 aaPredicted RBP16.91■□□□□ 0.3
CBWD3-203ENST00000377344 LAS1LQ9Y4W2 734 aaKnown RBP16.91■□□□□ 0.3
CBWD3-203ENST00000377344 GLI3P10071 1580 aa16.89■□□□□ 0.29
CBWD3-203ENST00000377344 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
CBWD3-203ENST00000377344 LGR6Q9HBX8 967 aa16.89■□□□□ 0.29
CBWD3-203ENST00000377344 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
CBWD3-203ENST00000377344 E9PSI1 815 aa16.89■□□□□ 0.29
CBWD3-203ENST00000377344 HSP90AB1P08238 724 aaKnown RBP16.89■□□□□ 0.29
CBWD3-203ENST00000377344 TNS2Q63HR2 1409 aa16.88■□□□□ 0.29
CBWD3-203ENST00000377344 SHANK3Q9BYB0 1731 aa16.88■□□□□ 0.29
CBWD3-203ENST00000377344 RNMTO43148 476 aaKnown RBP16.88■□□□□ 0.29
CBWD3-203ENST00000377344 SLFN5Q08AF3 891 aa16.88■□□□□ 0.29
CBWD3-203ENST00000377344 TEFQ10587 303 aa16.87■□□□□ 0.29
CBWD3-203ENST00000377344 DCAF5Q96JK2 942 aa16.87■□□□□ 0.29
CBWD3-203ENST00000377344 IL16Q14005 1332 aa16.87■□□□□ 0.29
CBWD3-203ENST00000377344 LRRC37A3O60309 1634 aa16.87■□□□□ 0.29
CBWD3-203ENST00000377344 MYH16Q9H6N6 1097 aa16.86■□□□□ 0.29
CBWD3-203ENST00000377344 GNAI1P63096 354 aa16.86■□□□□ 0.29
CBWD3-203ENST00000377344 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
CBWD3-203ENST00000377344 TSR2Q969E8 191 aaKnown RBP16.85■□□□□ 0.29
CBWD3-203ENST00000377344 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
CBWD3-203ENST00000377344 KDM6AO15550 1401 aaPredicted RBP16.85■□□□□ 0.29
CBWD3-203ENST00000377344 CFAP44Q96MT7 982 aa16.84■□□□□ 0.29
CBWD3-203ENST00000377344 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
CBWD3-203ENST00000377344 RBM6P78332 1123 aaKnown RBP16.84■□□□□ 0.29
CBWD3-203ENST00000377344 DUSP27Q5VZP5 1158 aa16.84■□□□□ 0.29
CBWD3-203ENST00000377344 SEPT12Q8IYM1 358 aa16.84■□□□□ 0.29
CBWD3-203ENST00000377344 MIS18AQ9NYP9 233 aa16.84■□□□□ 0.29
CBWD3-203ENST00000377344 THSD7AQ9UPZ6 1657 aa16.83■□□□□ 0.28
CBWD3-203ENST00000377344 NKX1-1Q15270 411 aaPredicted RBP16.83■□□□□ 0.28
CBWD3-203ENST00000377344 FANCIQ9NVI1 1328 aa16.83■□□□□ 0.28
CBWD3-203ENST00000377344 SCN11AQ9UI33 1791 aa16.83■□□□□ 0.28
CBWD3-203ENST00000377344 ONECUT3O60422 494 aaPredicted RBP16.82■□□□□ 0.28
CBWD3-203ENST00000377344 TAF7Q15545 349 aaPredicted RBP16.82■□□□□ 0.28
CBWD3-203ENST00000377344 TRMT2AQ8IZ69 625 aaKnown RBP16.82■□□□□ 0.28
CBWD3-203ENST00000377344 MARCH10Q8NA82 808 aaPredicted RBP16.82■□□□□ 0.28
CBWD3-203ENST00000377344 MBIPQ9NS73 344 aa16.82■□□□□ 0.28
CBWD3-203ENST00000377344 TSPYL4Q9UJ04 414 aa16.82■□□□□ 0.28
CBWD3-203ENST00000377344 ZNF853P0CG23 659 aa16.82■□□□□ 0.28
CBWD3-203ENST00000377344 RXRBP28702 533 aa16.82■□□□□ 0.28
CBWD3-203ENST00000377344 CABP4P57796 275 aa16.82■□□□□ 0.28
CBWD3-203ENST00000377344 SLC52A2Q9HAB3 445 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms