RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 PCDH11XQ9BZA7 1347 aa30■■■□□ 2.39
SRM-201ENST00000376957 PCDH11YQ9BZA8 1340 aa30■■■□□ 2.39
SRM-201ENST00000376957 EIF4A2Q14240 407 aaKnown RBP30■■■□□ 2.39
SRM-201ENST00000376957 CC2D1BQ5T0F9 858 aaKnown RBP30■■■□□ 2.39
SRM-201ENST00000376957 EYA1Q99502 592 aa30■■■□□ 2.39
SRM-201ENST00000376957 RGPD3A6NKT7 1758 aaPredicted RBP30■■■□□ 2.39
SRM-201ENST00000376957 RGPD4Q7Z3J3 1758 aa30■■■□□ 2.39
SRM-201ENST00000376957 SPG7Q9UQ90 795 aa29.99■■■□□ 2.39
SRM-201ENST00000376957 NPC1L1Q9UHC9 1359 aa29.98■■■□□ 2.39
SRM-201ENST00000376957 NHSQ6T4R5 1651 aa29.98■■■□□ 2.39
SRM-201ENST00000376957 KCNQ2O43526 872 aa29.97■■■□□ 2.39
SRM-201ENST00000376957 SYTL4Q96C24 671 aaPredicted RBP29.96■■■□□ 2.39
SRM-201ENST00000376957 RREB1Q92766 1687 aa29.95■■■□□ 2.38
SRM-201ENST00000376957 PTF1AQ7RTS3 328 aa29.94■■■□□ 2.38
SRM-201ENST00000376957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.94■■■□□ 2.38
SRM-201ENST00000376957 PSDA5PKW4 1024 aaPredicted RBP29.93■■■□□ 2.38
SRM-201ENST00000376957 R3HDM1Q15032 1099 aaKnown RBP29.93■■■□□ 2.38
SRM-201ENST00000376957 NCAPD2Q15021 1401 aa29.93■■■□□ 2.38
SRM-201ENST00000376957 PLEKHG2Q9H7P9 1386 aa29.91■■■□□ 2.38
SRM-201ENST00000376957 MTHFSP49914 203 aa29.91■■■□□ 2.38
SRM-201ENST00000376957 PRIM1P49642 420 aaKnown RBP29.9■■■□□ 2.38
SRM-201ENST00000376957 CNGB1Q14028 1251 aaPredicted RBP29.9■■■□□ 2.38
SRM-201ENST00000376957 TXNRD1Q16881 649 aa29.9■■■□□ 2.38
SRM-201ENST00000376957 IGSF1Q8N6C5 1336 aa29.9■■■□□ 2.38
SRM-201ENST00000376957 NUP188Q5SRE5 1749 aa29.89■■■□□ 2.38
SRM-201ENST00000376957 ZEB1P37275 1124 aaPredicted RBP29.88■■■□□ 2.37
SRM-201ENST00000376957 SHANK3Q9BYB0 1731 aa29.88■■■□□ 2.37
SRM-201ENST00000376957 HMGB2P26583 209 aaKnown RBP29.87■■■□□ 2.37
SRM-201ENST00000376957 BTAF1O14981 1849 aa29.86■■■□□ 2.37
SRM-201ENST00000376957 PKD1L3Q7Z443 1732 aa29.85■■■□□ 2.37
SRM-201ENST00000376957 DOT1LQ8TEK3 1739 aa29.85■■■□□ 2.37
SRM-201ENST00000376957 AMOTQ4VCS5 1084 aa29.84■■■□□ 2.37
SRM-201ENST00000376957 PLEKHO1Q53GL0 409 aaPredicted RBP29.84■■■□□ 2.37
SRM-201ENST00000376957 IFNL2Q8IZJ0 200 aa29.84■■■□□ 2.37
SRM-201ENST00000376957 STK32BQ9NY57 414 aa29.84■■■□□ 2.37
SRM-201ENST00000376957 CYP27B1O15528 508 aa29.83■■■□□ 2.37
SRM-201ENST00000376957 DIAPH1O60610 1272 aaKnown RBP29.82■■■□□ 2.36
SRM-201ENST00000376957 IL13P35225 146 aa29.82■■■□□ 2.36
SRM-201ENST00000376957 SLC27A3Q5K4L6 730 aa29.82■■■□□ 2.36
SRM-201ENST00000376957 PROM2Q8N271 834 aa29.82■■■□□ 2.36
SRM-201ENST00000376957 CFAP53Q96M91 514 aa29.81■■■□□ 2.36
SRM-201ENST00000376957 HSP90AB1P08238 724 aaKnown RBP29.8■■■□□ 2.36
SRM-201ENST00000376957 NKX1-1Q15270 411 aaPredicted RBP29.8■■■□□ 2.36
SRM-201ENST00000376957 SULT6B1Q6IMI4 303 aa29.8■■■□□ 2.36
SRM-201ENST00000376957 PHKG2P15735 406 aa29.77■■■□□ 2.36
SRM-201ENST00000376957 MPRIPQ6WCQ1 1025 aa29.77■■■□□ 2.36
SRM-201ENST00000376957 C1orf141Q5JVX7 400 aa29.76■■■□□ 2.35
SRM-201ENST00000376957 SMARCC1Q92922 1105 aaPredicted RBP29.75■■■□□ 2.35
SRM-201ENST00000376957 SLC15A2Q16348 729 aa29.73■■■□□ 2.35
SRM-201ENST00000376957 ZNF530Q6P9A1 599 aaPredicted RBP29.73■■■□□ 2.35
SRM-201ENST00000376957 TMOD3Q9NYL9 352 aa29.73■■■□□ 2.35
SRM-201ENST00000376957 KDRP35968 1356 aa29.73■■■□□ 2.35
SRM-201ENST00000376957 AEBP1Q8IUX7 1158 aa29.72■■■□□ 2.35
SRM-201ENST00000376957 DCAF5Q96JK2 942 aa29.72■■■□□ 2.35
SRM-201ENST00000376957 CCNL1Q9UK58 526 aaPredicted RBP29.71■■■□□ 2.35
SRM-201ENST00000376957 ANO8Q9HCE9 1232 aaPredicted RBP29.7■■■□□ 2.35
SRM-201ENST00000376957 NUDCQ9Y266 331 aa29.7■■■□□ 2.35
SRM-201ENST00000376957 LRP5O75197 1615 aa29.7■■■□□ 2.34
SRM-201ENST00000376957 U2SURPO15042 1029 aaKnown RBP29.69■■■□□ 2.34
SRM-201ENST00000376957 ERVV-2B6SEH9 535 aa29.67■■■□□ 2.34
SRM-201ENST00000376957 HMOX1P09601 288 aa29.67■■■□□ 2.34
SRM-201ENST00000376957 SPON1Q9HCB6 807 aa29.67■■■□□ 2.34
SRM-201ENST00000376957 ITGB4P16144 1822 aa29.66■■■□□ 2.34
SRM-201ENST00000376957 PPP2R1AP30153 589 aa29.66■■■□□ 2.34
SRM-201ENST00000376957 PIGBQ92521 554 aa29.66■■■□□ 2.34
SRM-201ENST00000376957 LRRC4BQ9NT99 713 aa29.66■■■□□ 2.34
SRM-201ENST00000376957 PALLDQ8WX93 1383 aa29.65■■■□□ 2.34
SRM-201ENST00000376957 LY75O60449 1722 aa29.65■■■□□ 2.34
SRM-201ENST00000376957 TOGARAM1Q9Y4F4 1720 aa29.62■■■□□ 2.33
SRM-201ENST00000376957 CABP4P57796 275 aa29.62■■■□□ 2.33
SRM-201ENST00000376957 AKAP4Q5JQC9 854 aa29.62■■■□□ 2.33
SRM-201ENST00000376957 TFCP2L1Q9NZI6 479 aa29.62■■■□□ 2.33
SRM-201ENST00000376957 DDX10Q13206 875 aaKnown RBP29.6■■■□□ 2.33
SRM-201ENST00000376957 PPP1R1BQ9UD71 204 aaPredicted RBP29.6■■■□□ 2.33
SRM-201ENST00000376957 PAPPAQ13219 1627 aa29.59■■■□□ 2.33
SRM-201ENST00000376957 COL3A1P02461 1466 aaPredicted RBP29.58■■■□□ 2.33
SRM-201ENST00000376957 KCNQ4P56696 695 aa29.58■■■□□ 2.33
SRM-201ENST00000376957 AKT1S1Q96B36 256 aa29.58■■■□□ 2.33
SRM-201ENST00000376957 RALBP1Q15311 655 aa29.56■■■□□ 2.32
SRM-201ENST00000376957 ZNF827Q17R98 1081 aa29.55■■■□□ 2.32
SRM-201ENST00000376957 MTFR1LQ9H019 292 aa29.55■■■□□ 2.32
SRM-201ENST00000376957 LOC102724428A0A0B4J2F2 783 aa29.54■■■□□ 2.32
SRM-201ENST00000376957 U2AF1L5P0DN76 240 aaPredicted RBP29.54■■■□□ 2.32
SRM-201ENST00000376957 SIK1P57059 783 aa29.54■■■□□ 2.32
SRM-201ENST00000376957 U2AF1Q01081 240 aaKnown RBP eCLIP29.54■■■□□ 2.32
SRM-201ENST00000376957 GAS2L2Q8NHY3 880 aa29.54■■■□□ 2.32
SRM-201ENST00000376957 ASAP1Q9ULH1 1129 aa29.54■■■□□ 2.32
SRM-201ENST00000376957 ZBTB7AO95365 584 aa29.53■■■□□ 2.32
SRM-201ENST00000376957 SLC16A10Q8TF71 515 aa29.53■■■□□ 2.32
SRM-201ENST00000376957 CASZ1Q86V15 1759 aa29.53■■■□□ 2.32
SRM-201ENST00000376957 NEFMP07197 916 aa29.52■■■□□ 2.32
SRM-201ENST00000376957 FLAD1Q8NFF5 587 aa29.52■■■□□ 2.32
SRM-201ENST00000376957 MTHFSDQ2M296 383 aaKnown RBP29.51■■■□□ 2.31
SRM-201ENST00000376957 ATG3Q9NT62 314 aa29.51■■■□□ 2.31
SRM-201ENST00000376957 KDM6AO15550 1401 aaPredicted RBP29.51■■■□□ 2.31
SRM-201ENST00000376957 C5P01031 1676 aa29.5■■■□□ 2.31
SRM-201ENST00000376957 ATP6V1AP38606 617 aa29.5■■■□□ 2.31
SRM-201ENST00000376957 NFATC2IPQ8NCF5 419 aa29.5■■■□□ 2.31
SRM-201ENST00000376957 AK7Q96M32 723 aa29.5■■■□□ 2.31
SRM-201ENST00000376957 SRCAPQ6ZRS2 3230 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms